iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ssc-116445

Ensembl Protein ID

ENSSSCP00000020539.1

UniProt Accession

I3L928; I3L928_PIG

Genbank Protein ID

ENSSSCP00000020539

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

FP312929

Gene Name

THOC6

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000023315.1	ENSSSCT00000026356.1	ENSSSCP00000020539.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-13	50.6	166	205

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllks 38
           gHtd ++cla+   ++ ++sG+ Dg +++WDlrt + +++
   Q: 166  GHTDYIHCLALreRSPEVLSGGEDGAVRLWDLRTAREVQT 205
           8**********98559******************998875 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

MDRAVPPAVP LGQMEVFQAL QRLHMTIFSQ SVSPCGKFLA AGNNYGQIAI FSLSAALSSE 60
AKEESKKPIV TFQAHDGPVY SMVSTDRHLL SAGDGEVKAW LWAEILKKGC KELWRRQPPY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGTCTGCGC AGGCGCGGAA GGCTGACGGC ACGCGGCTGG AAGGCGGGTC TGCTCTGCGG 60
GGTGGGGGCG GGGGCCCGCC GTAGCGGGGT TGCGGTGGGT ACCACTTAGT CTTGGGATCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005622--C:intracellular
GO:0000784--C:nuclear chromosome, telomeric region
GO:0016607--C:nuclear speck
GO:0000445--C:THO complex part of transcription export complex
GO:0007417--P:central nervous system development
GO:0043066--P:negative regulation of apoptotic process
GO:0046784--P:viral mRNA export from host cell nucleus

KEGG

ssc:100626533

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001101	Aegilops tauschii	29.03	4.00e-29	121.00
IUUC-Aml-001693	Ailuropoda melanoleuca	97.36	0.00e+00	632.00
IUUC-Atr-002699	Amborella trichopoda	29.20	1.00e-23	103.00
IUUC-Aca-004231	Anolis carolinensis	70.73	4.00e-128	450.00
IUUC-Aly-006385	Arabidopsis lyrata	29.82	1.00e-27	117.00
IUUC-Ath-006723	Arabidopsis thaliana	29.82	8.00e-28	117.00
IUUC-Ame-010813	Astyanax mexicanus	65.12	9.00e-89	318.00
IUUC-Bta-013458	Bos taurus	96.48	2.00e-180	624.00
IUUC-Bdi-014935	Brachypodium distachyon	28.74	5.00e-29	121.00
IUUC-Bol-015442	Brassica oleracea	29.39	4.00e-28	118.00
IUUC-Bra-017807	Brassica rapa	30.09	2.00e-28	119.00
IUUC-Cja-019061	Callithrix jacchus	96.78	1.00e-180	625.00
IUUC-Cfa-021146	Canis familiaris	97.07	0.00e+00	631.00
IUUC-Cpo-022512	Cavia porcellus	95.60	4.00e-180	623.00
IUUC-Csa-023055	Chlorocebus sabaeus	95.89	0.00e+00	628.00
IUUC-Cho-024693	Choloepus hoffmanni	96.91	1.00e-100	358.00
IUUC-Cin-025181	Ciona intestinalis	36.34	8.00e-58	216.00
IUUC-Csv-025852	Ciona savignyi	35.22	5.00e-50	191.00
IUUC-Dre-028221	Danio rerio	60.25	7.00e-119	419.00
IUUC-Dno-029200	Dasypus novemcinctus	91.53	5.00e-89	319.00
IUUC-Dor-030863	Dipodomys ordii	94.72	9.00e-178	615.00
IUUC-Dme-032016	Drosophila melanogaster	28.75	2.00e-37	149.00
IUUC-Eca-034363	Equus caballus	97.95	0.00e+00	637.00
IUUC-Fca-036546	Felis catus	97.07	0.00e+00	631.00
IUUC-Gmo-038513	Gadus morhua	58.57	3.00e-109	387.00
IUUC-Gac-042606	Gasterosteus aculeatus	57.14	6.00e-112	396.00
IUUC-Gma-043171	Glycine max	27.85	1.00e-31	130.00
IUUC-Ggo-044877	Gorilla gorilla	97.07	0.00e+00	632.00
IUUC-Hsa-045813	Homo sapiens	97.07	0.00e+00	633.00
IUUC-Hvu-047782	Hordeum vulgare	30.41	2.00e-20	91.30
IUUC-Itr-047876	Ictidomys tridecemlineatus	97.07	0.00e+00	629.00
IUUC-Lch-049506	Latimeria chalumnae	63.83	3.00e-119	421.00
IUUC-Lpe-051203	Leersia perrieri	29.28	1.00e-24	106.00
IUUC-Loc-052451	Lepisosteus oculatus	51.53	8.00e-90	323.00
IUUC-Laf-053864	Loxodonta africana	96.77	0.00e+00	626.00
IUUC-Mcc-055705	Macaca mulatta	88.62	8.00e-155	539.00
IUUC-Meu-055926	Macropus eugenii	91.16	2.00e-158	550.00
IUUC-Mtr-058556	Medicago truncatula	28.53	1.00e-31	130.00
IUUC-Mmr-060836	Microcebus murinus	96.77	0.00e+00	630.00
IUUC-Mdo-062534	Monodelphis domestica	91.77	7.00e-158	549.00
IUUC-Mmu-063560	Mus musculus	95.01	2.00e-178	617.00
IUUC-Mac-065134	Musa acuminata	27.82	4.00e-26	112.00
IUUC-Mpu-066031	Mustela putorius furo	98.83	0.00e+00	641.00
IUUC-Mlu-068051	Myotis lucifugus	94.72	5.00e-175	606.00
IUUC-Nle-069080	Nomascus leucogenys	96.48	0.00e+00	628.00
IUUC-Opr-070787	Ochotona princeps	91.79	2.00e-169	588.00
IUUC-Ont-071952	Oreochromis niloticus	55.90	1.00e-110	392.00
IUUC-Oan-073334	Ornithorhynchus anatinus	86.54	5.00e-120	423.00
IUUC-Oba-075175	Oryza barthii	29.83	2.00e-25	109.00
IUUC-Obr-076393	Oryza brachyantha	30.39	3.00e-25	108.00
IUUC-Ogl-077603	Oryza glaberrima	34.75	1.00e-18	86.30
IUUC-Ogu-078211	Oryza glumaepatula	29.83	2.00e-25	109.00
IUUC-Oin-079554	Oryza indica	29.83	1.00e-25	110.00
IUUC-Olo-080922	Oryza longistaminata	31.06	6.00e-23	101.00
IUUC-Ome-081127	Oryza meridionalis	23.20	2.00e-12	67.00
IUUC-Oni-082376	Oryza nivara	29.83	2.00e-25	109.00
IUUC-Opu-083163	Oryza punctata	29.28	7.00e-25	107.00
IUUC-Oru-084311	Oryza rufipogon	29.83	3.00e-25	108.00
IUUC-Osa-085762	Oryza sativa	34.75	2.00e-18	85.90
IUUC-Oga-088804	Otolemur garnettii	95.01	5.00e-179	619.00
IUUC-Oar-090095	Ovis aries	95.89	7.00e-180	622.00
IUUC-Ptr-090731	Pan troglodytes	97.36	0.00e+00	633.00
IUUC-Pan-092595	Papio anubis	96.49	0.00e+00	626.00
IUUC-Psi-093866	Pelodiscus sinensis	70.30	2.00e-118	418.00
IUUC-Pma-094236	Petromyzon marinus	59.88	1.00e-116	412.00
IUUC-Pfo-096095	Poecilia formosa	56.52	3.00e-107	380.00
IUUC-Pab-098385	Pongo abelii	96.48	0.00e+00	630.00
IUUC-Pop-099433	Populus trichocarpa	26.85	7.00e-29	120.00
IUUC-Pca-101119	Procavia capensis	96.80	7.00e-118	416.00
IUUC-Ppe-101677	Prunus persica	28.23	1.00e-26	113.00
IUUC-Pva-102726	Pteropus vampyrus	96.77	0.00e+00	629.00
IUUC-Rno-105576	Rattus norvegicus	95.31	1.00e-178	618.00
IUUC-Sha-106774	Sarcophilus harrisii	91.77	3.00e-159	553.00
IUUC-Sit-109988	Setaria italica	27.08	4.00e-27	115.00
IUUC-Sly-110864	Solanum lycopersicum	28.97	5.00e-28	118.00
IUUC-Sar-113060	Sorex araneus	87.45	3.00e-129	453.00
IUUC-Sbi-114699	Sorghum bicolor	28.35	8.00e-28	117.00
IUUC-Tru-117834	Takifugu rubripes	55.88	3.00e-114	404.00
IUUC-Tni-119651	Tetraodon nigroviridis	57.14	1.00e-113	402.00
IUUC-Tca-121318	Theobroma cacao	26.61	2.00e-27	115.00
IUUC-Tae-124184	Triticum aestivum	29.03	4.00e-29	121.00
IUUC-Tur-126226	Triticum urartu	29.83	2.00e-26	112.00
IUUC-Tbe-128079	Tupaia belangeri	82.02	2.00e-108	384.00
IUUC-Ttr-128391	Tursiops truncatus	92.69	6.00e-171	592.00
IUUC-Vvi-131148	Vitis vinifera	26.61	2.00e-24	106.00
IUUC-Xtr-132743	Xenopus tropicalis	61.72	2.00e-116	411.00
IUUC-Xma-133722	Xiphophorus maculatus	56.83	6.00e-112	396.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence