iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000033378.5	ENSRNOT00000043825.4	ENSRNOP00000041545.2
ENSRNOG00000033378.5	ENSRNOT00000050344.5	ENSRNOP00000049507.2

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
TRANSFAC	RAID2
Protein-protein Interaction
iRefIndex	HINT
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	93.71	0.00e+00	2384.00	IUUC-Hsa-046786

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MTSKGAAMSF SRKSYRLTSD AEKSRVTGIV QEKLLSDYLY RIFSSPDHGT PAATSRKPLN 60
FHNLPEHVDQ LLQVDDEESQ GQVEGRLGPS TVVLDHTGGF EGLLLVDDDL LGVIGHSNFG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGAGAGGCGG CCTGGCTACG AGCCGGGCGG GTCCGGTGAC TCCCTTCGAG GCCCCTGGCC 60
GATCCAGTGC GACAGTGCCG CGGCCTGCGG TATAGGGCTC CCAGCGGGAG CTGGCCTGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR011989--ARM-like
IPR001870--B30.2/SPRY
IPR013320--ConA-like_dom
IPR003877--SPRY_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50188--B302_SPRY
PS50089--ZF_RING_2

Pfam

PF00622--SPRY

SMART

SM00184--RING
SM00449--SPRY

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

rno:100190936

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002334	Ailuropoda melanoleuca	92.71	0.00e+00	2278.00
IUUC-Atr-002731	Amborella trichopoda	25.53	2.00e-87	317.00
IUUC-Apl-003337	Anas platyrhynchos	79.27	0.00e+00	2011.00
IUUC-Aca-005266	Anolis carolinensis	79.35	0.00e+00	1615.00
IUUC-Aly-005720	Arabidopsis lyrata	34.09	6.00e-46	179.00
IUUC-Ath-007453	Arabidopsis thaliana	28.67	1.00e-48	188.00
IUUC-Ame-011173	Astyanax mexicanus	67.26	0.00e+00	1428.00
IUUC-Bta-012466	Bos taurus	91.79	0.00e+00	2316.00
IUUC-Bol-016281	Brassica oleracea	25.76	5.00e-95	343.00
IUUC-Bra-016892	Brassica rapa	26.21	3.00e-96	347.00
IUUC-Cja-019535	Callithrix jacchus	92.79	0.00e+00	2320.00
IUUC-Cfa-020260	Canis familiaris	93.40	0.00e+00	2327.00
IUUC-Cpo-021921	Cavia porcellus	92.10	0.00e+00	2352.00
IUUC-Cre-022617	Chlamydomonas reinhardtii	51.53	1.00e-47	185.00
IUUC-Csa-024158	Chlorocebus sabaeus	94.02	0.00e+00	2328.00
IUUC-Cho-025093	Choloepus hoffmanni	80.94	0.00e+00	891.00
IUUC-Cin-025392	Ciona intestinalis	37.69	2.00e-111	396.00
IUUC-Csv-026271	Ciona savignyi	34.55	4.00e-38	151.00
IUUC-Dre-027457	Danio rerio	78.94	0.00e+00	1226.00
IUUC-Dor-030129	Dipodomys ordii	87.30	0.00e+00	2145.00
IUUC-Dme-032022	Drosophila melanogaster	29.77	1.00e-162	567.00
IUUC-Ete-032681	Echinops telfairi	83.27	0.00e+00	813.00
IUUC-Eca-033488	Equus caballus	92.21	0.00e+00	2402.00
IUUC-Eeu-035141	Erinaceus europaeus	94.53	0.00e+00	979.00
IUUC-Fca-036540	Felis catus	93.41	0.00e+00	2300.00
IUUC-Fal-036716	Ficedula albicollis	79.81	0.00e+00	1992.00
IUUC-Gmo-038827	Gadus morhua	72.16	0.00e+00	843.00
IUUC-Gga-040227	Gallus gallus	79.56	0.00e+00	1982.00
IUUC-Gac-041611	Gasterosteus aculeatus	79.49	0.00e+00	923.00
IUUC-Gma-043507	Glycine max	25.26	5.00e-88	319.00
IUUC-Ggo-045274	Gorilla gorilla	93.79	0.00e+00	2318.00
IUUC-Hsa-046786	Homo sapiens	93.71	0.00e+00	2321.00
IUUC-Itr-047988	Ictidomys tridecemlineatus	93.43	0.00e+00	2424.00
IUUC-Lch-050613	Latimeria chalumnae	81.68	0.00e+00	1083.00
IUUC-Lpe-050692	Leersia perrieri	26.61	2.00e-44	175.00
IUUC-Loc-052484	Lepisosteus oculatus	75.67	0.00e+00	1907.00
IUUC-Laf-053359	Loxodonta africana	91.65	0.00e+00	2305.00
IUUC-Mcc-054643	Macaca mulatta	94.16	0.00e+00	2329.00
IUUC-Meu-056856	Macropus eugenii	77.88	0.00e+00	1745.00
IUUC-Mtr-058494	Medicago truncatula	25.51	8.00e-88	318.00
IUUC-Mga-060198	Meleagris gallopavo	66.04	0.00e+00	1295.00
IUUC-Mmr-061762	Microcebus murinus	93.02	0.00e+00	2332.00
IUUC-Mdo-062049	Monodelphis domestica	80.83	0.00e+00	2046.00
IUUC-Mmu-064274	Mus musculus	97.47	0.00e+00	2513.00
IUUC-Mac-064561	Musa acuminata	45.05	2.00e-45	177.00
IUUC-Mpu-066413	Mustela putorius furo	93.26	0.00e+00	2312.00
IUUC-Mlu-067411	Myotis lucifugus	93.14	0.00e+00	1066.00
IUUC-Nle-069644	Nomascus leucogenys	93.70	0.00e+00	2325.00
IUUC-Opr-070465	Ochotona princeps	89.63	0.00e+00	2224.00
IUUC-Ont-072552	Oreochromis niloticus	73.20	0.00e+00	1674.00
IUUC-Ocu-074740	Oryctolagus cuniculus	91.67	0.00e+00	2300.00
IUUC-Oba-075088	Oryza barthii	31.87	4.00e-43	170.00
IUUC-Obr-076657	Oryza brachyantha	26.71	8.00e-43	169.00
IUUC-Ogl-077313	Oryza glaberrima	27.98	3.00e-31	129.00
IUUC-Ogu-078672	Oryza glumaepatula	32.14	6.00e-44	173.00
IUUC-Oin-079756	Oryza indica	32.14	5.00e-44	173.00
IUUC-Olo-080369	Oryza longistaminata	33.52	6.00e-44	173.00
IUUC-Oni-082996	Oryza nivara	32.14	4.00e-44	173.00
IUUC-Opu-083892	Oryza punctata	26.19	7.00e-13	67.40
IUUC-Oru-084434	Oryza rufipogon	32.09	2.00e-46	181.00
IUUC-Osa-085595	Oryza sativa	31.49	3.00e-28	118.00
IUUC-Ola-086405	Oryzias latipes	76.57	0.00e+00	1297.00
IUUC-Oga-088794	Otolemur garnettii	92.61	0.00e+00	2313.00
IUUC-Oar-089775	Ovis aries	84.12	0.00e+00	2130.00
IUUC-Pan-092845	Papio anubis	93.72	0.00e+00	2321.00
IUUC-Psi-093521	Pelodiscus sinensis	75.09	4.00e-114	404.00
IUUC-Ppa-095501	Physcomitrella patens	28.01	1.00e-100	361.00
IUUC-Pfo-097083	Poecilia formosa	74.45	0.00e+00	1899.00
IUUC-Pab-098302	Pongo abelii	92.19	0.00e+00	2284.00
IUUC-Pop-099033	Populus trichocarpa	29.16	2.00e-50	195.00
IUUC-Pca-100742	Procavia capensis	83.63	0.00e+00	2030.00
IUUC-Ppe-101476	Prunus persica	31.93	2.00e-44	174.00
IUUC-Pva-103045	Pteropus vampyrus	90.66	0.00e+00	2202.00
IUUC-Sha-107441	Sarcophilus harrisii	81.99	0.00e+00	2068.00
IUUC-Smo-109606	Selaginella moellendorffii	27.56	1.00e-101	365.00
IUUC-Sit-110792	Setaria italica	33.51	3.00e-44	174.00
IUUC-Sly-110982	Solanum lycopersicum	26.01	1.00e-89	324.00
IUUC-Stu-112003	Solanum tuberosum	25.51	3.00e-66	247.00
IUUC-Sar-113146	Sorex araneus	91.42	0.00e+00	1073.00
IUUC-Sbi-113941	Sorghum bicolor	32.95	4.00e-38	153.00
IUUC-Ssc-115635	Sus scrofa	92.63	0.00e+00	2345.00
IUUC-Tgu-116688	Taeniopygia guttata	79.85	0.00e+00	1863.00
IUUC-Tsy-119023	Tarsius syrichta	97.90	0.00e+00	676.00
IUUC-Tca-121219	Theobroma cacao	35.23	1.00e-49	192.00
IUUC-Tbe-127542	Tupaia belangeri	71.34	0.00e+00	1228.00
IUUC-Ttr-128241	Tursiops truncatus	90.35	0.00e+00	2205.00
IUUC-Vvi-131629	Vitis vinifera	34.45	3.00e-49	191.00
IUUC-Xtr-132790	Xenopus tropicalis	76.88	0.00e+00	1988.00
IUUC-Xma-133302	Xiphophorus maculatus	71.68	0.00e+00	1263.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence