iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-005850

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

GL348718

Gene Name

ARALYDRAFT_907959

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_600016.1	scaffold_600016.1	scaffold_600016.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.20e-08	36.0	104	146

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl +f   ++ ++vlp C+H fh +C+  w         + +CP Cr
   Q: 104  CAICLGEFadgER-VRVLPpCKHSFHMSCIDTW------LVSHSSCPNCR 146
           ********55444.999999*************......99********8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MHRLLLESHG GGNETSGGGG DGYMRDMNFD ANMVIILAAL LCALILALGL NSILRCAMRC 60
GFGLSSSAAG GAVADRSGLK KRELKKFPVA AYGSGEVKIA ATECAICLGE FADGERVRVL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTGACACCGG AGACTCCTCA GATGCATCGA CTGCTACTGG AATCCCACGG CGGCGGGAAC 60
GAGACGAGCG GCGGCGGCGG AGATGGGTAC ATGAGAGACA TGAACTTCGA CGCAAACATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_907959

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000754	Aegilops tauschii	63.01	1.00e-23	100.00
IUUC-Aml-001916	Ailuropoda melanoleuca	42.17	3.00e-14	73.20
IUUC-Atr-003049	Amborella trichopoda	62.50	2.00e-33	134.00
IUUC-Apl-004188	Anas platyrhynchos	42.17	2.00e-14	73.90
IUUC-Ath-007372	Arabidopsis thaliana	93.08	2.00e-63	234.00
IUUC-Ame-011764	Astyanax mexicanus	40.96	4.00e-12	66.60
IUUC-Bta-012478	Bos taurus	41.98	3.00e-13	69.70
IUUC-Bol-016217	Brassica oleracea	82.80	8.00e-59	218.00
IUUC-Bra-017407	Brassica rapa	82.80	1.00e-58	217.00
IUUC-Cja-019504	Callithrix jacchus	42.68	8.00e-14	72.00
IUUC-Cfa-020048	Canis familiaris	42.17	3.00e-14	73.60
IUUC-Cpo-021725	Cavia porcellus	40.96	2.00e-14	73.90
IUUC-Csa-023586	Chlorocebus sabaeus	42.17	3.00e-14	73.60
IUUC-Cho-024867	Choloepus hoffmanni	42.17	2.00e-14	73.90
IUUC-Dre-027553	Danio rerio	53.06	2.00e-13	70.50
IUUC-Dno-029370	Dasypus novemcinctus	42.17	2.00e-14	73.90
IUUC-Dor-030816	Dipodomys ordii	42.17	2.00e-14	74.30
IUUC-Ete-033060	Echinops telfairi	42.68	7.00e-14	72.00
IUUC-Eca-034044	Equus caballus	42.68	8.00e-14	72.00
IUUC-Fca-036000	Felis catus	42.17	3.00e-14	73.20
IUUC-Fal-037147	Ficedula albicollis	42.17	2.00e-14	73.90
IUUC-Gmo-039099	Gadus morhua	50.00	2.00e-13	70.10
IUUC-Gga-041243	Gallus gallus	42.17	4.00e-14	72.80
IUUC-Gac-041340	Gasterosteus aculeatus	51.92	9.00e-14	70.90
IUUC-Gma-042817	Glycine max	59.62	1.00e-37	147.00
IUUC-Ggo-044953	Gorilla gorilla	42.68	8.00e-14	72.00
IUUC-Hsa-046484	Homo sapiens	42.68	9.00e-14	72.00
IUUC-Itr-048470	Ictidomys tridecemlineatus	42.68	7.00e-14	72.00
IUUC-Lpe-050718	Leersia perrieri	59.84	6.00e-30	122.00
IUUC-Loc-051830	Lepisosteus oculatus	55.32	9.00e-13	68.60
IUUC-Laf-053975	Loxodonta africana	42.68	2.00e-14	73.90
IUUC-Mcc-055302	Macaca mulatta	42.17	3.00e-14	73.60
IUUC-Meu-056263	Macropus eugenii	42.68	4.00e-14	72.80
IUUC-Mga-059706	Meleagris gallopavo	42.17	2.00e-14	73.90
IUUC-Mmr-061372	Microcebus murinus	42.68	8.00e-14	72.00
IUUC-Mdo-062651	Monodelphis domestica	43.37	4.00e-15	76.30
IUUC-Mmu-064339	Mus musculus	42.17	6.00e-15	75.90
IUUC-Mpu-066211	Mustela putorius furo	42.17	4.00e-14	73.20
IUUC-Mlu-067058	Myotis lucifugus	42.17	1.00e-13	71.60
IUUC-Nle-069886	Nomascus leucogenys	42.17	4.00e-14	73.20
IUUC-Opr-070218	Ochotona princeps	42.17	2.00e-14	73.60
IUUC-Ont-072483	Oreochromis niloticus	42.17	2.00e-14	73.90
IUUC-Oan-073718	Ornithorhynchus anatinus	43.37	2.00e-15	77.80
IUUC-Ocu-073847	Oryctolagus cuniculus	44.23	3.00e-11	63.20
IUUC-Oba-075857	Oryza barthii	54.96	6.00e-30	123.00
IUUC-Ogu-078991	Oryza glumaepatula	50.46	2.00e-27	115.00
IUUC-Oin-079676	Oryza indica	55.47	1.00e-28	118.00
IUUC-Ome-081555	Oryza meridionalis	53.85	2.00e-27	114.00
IUUC-Oni-082477	Oryza nivara	54.96	1.00e-27	115.00
IUUC-Oru-085208	Oryza rufipogon	54.20	1.00e-27	115.00
IUUC-Osa-086273	Oryza sativa	54.20	1.00e-27	115.00
IUUC-Ola-087358	Oryzias latipes	54.35	5.00e-12	65.90
IUUC-Oga-088362	Otolemur garnettii	42.17	3.00e-14	73.60
IUUC-Oar-090197	Ovis aries	41.46	7.00e-14	71.60
IUUC-Ptr-091350	Pan troglodytes	42.68	9.00e-14	72.00
IUUC-Pan-091700	Papio anubis	42.17	3.00e-14	73.60
IUUC-Psi-093301	Pelodiscus sinensis	42.17	2.00e-14	73.60
IUUC-Pfo-096917	Poecilia formosa	41.67	5.00e-14	72.40
IUUC-Pab-097932	Pongo abelii	42.17	3.00e-14	73.60
IUUC-Pca-101054	Procavia capensis	42.17	2.00e-14	73.60
IUUC-Pva-102879	Pteropus vampyrus	42.17	7.00e-14	72.00
IUUC-Sha-106507	Sarcophilus harrisii	40.91	3.00e-14	73.20
IUUC-Smo-109408	Selaginella moellendorffii	47.95	5.00e-18	84.00
IUUC-Sar-113182	Sorex araneus	42.35	3.00e-15	76.60
IUUC-Ssc-115966	Sus scrofa	42.17	3.00e-14	73.20
IUUC-Tru-118502	Takifugu rubripes	39.29	3.00e-12	66.60
IUUC-Tsy-119210	Tarsius syrichta	42.17	3.00e-14	73.60
IUUC-Tni-120344	Tetraodon nigroviridis	51.92	1.00e-13	70.90
IUUC-Tae-122886	Triticum aestivum	56.74	5.00e-29	119.00
IUUC-Vvi-131731	Vitis vinifera	68.70	2.00e-39	154.00
IUUC-Xtr-132280	Xenopus tropicalis	53.19	1.00e-11	65.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence