iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
microRNA	RAID2
Protein-protein Interaction
IID	PINA	Mentha
Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.90e-45	149.3	314	342
UBD/Beta-Prp	1.00e-81	274.4	44	272

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikv 27
           gH++sv++++f +  +l++sGs D+t+++
   Q: 314  GHNGSVNAVDFsPKePLILSGSSDKTLYL 342
           8**********97779**********975 PP

UBD/Beta-Prp

   S: 44   l...lrslsgheaevtavkfspdgkilvtgseDrtikvw.dlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghd 137
           l   + +l+ghe+e+ + +f+p+g++l++++ Dr i++w  +++++ v++++gh+  v+  +f p+g+++ + s d+t+  wd+ tgq  +  ++gh 
   Q: 44   LqapIMQLEGHEGEIFTAEFHPEGELLLSSGFDRQIYIWqVYEDCENVMAMSGHSGAVMEAHFTPDGSHIFTCSTDKTLAFWDIATGQRQR-RFKGHG 140
           1556889********************************8889************************************************.****** PP
   S: 138  gvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnd 234
            +vn+v+ +  g +ll sGs+Drt+++Wd + +   +tl++    +v+ + f ++g++++sg+ d+ vk+wd++++ +++ l+gh+d+++ + +sp++
   Q: 141  NFVNSVQGSRRGqQLLCSGSDDRTIKIWDARKKHAAHTLES--PFQVTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSPEG 236
           ***************************************87..******************************************************* PP
   S: 235  erlvsgssDgsiriWdlrs....gdllktlqlhnss 266
           +++++ ++D+++r+Wd+r       ++k++q+h+++
   Q: 237  DFILTNAMDNTLRVWDVRPyapgERCVKVFQGHQHN 272
           ****************99622225789999999876 PP

Organism

Drosophila melanogaster

Protein Sequence
(Fasta)

MGTKRPNNSV ILAQEAKRSK NDLMAYTNRD KALLESGVRR TSNLQAPIMQ LEGHEGEIFT 60
AEFHPEGELL LSSGFDRQIY IWQVYEDCEN VMAMSGHSGA VMEAHFTPDG SHIFTCSTDK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTAAAATGTT TTTCAGTATT TTTGCCAGAG TTGCCGACTT TCACTTCCTT TGTTCTCACT 60
GAAAGTAGCC ACATCTATTC AGAAATATCT GAATTAATCG CTAACAGCCA TGTCGGTAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR027295--Quinoprotein_ADH-like_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0071011--C:precatalytic spliceosome
GO:0005682--C:U5 snRNP
GO:0003723--F:RNA binding
GO:0007067--P:mitotic nuclear division
GO:0000398--P:mRNA splicing, via spliceosome
GO:0008380--P:RNA splicing

KEGG

dme:Dmel_CG3436

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000138	Aegilops tauschii	50.58	3.00e-104	370.00
IUUC-Aml-001428	Ailuropoda melanoleuca	61.17	3.00e-109	387.00
IUUC-Atr-003164	Amborella trichopoda	51.77	4.00e-104	370.00
IUUC-Apl-003447	Anas platyrhynchos	61.40	1.00e-106	378.00
IUUC-Aca-004270	Anolis carolinensis	56.69	7.00e-111	392.00
IUUC-Aly-005659	Arabidopsis lyrata	54.19	7.00e-107	379.00
IUUC-Ath-006764	Arabidopsis thaliana	53.87	1.00e-106	378.00
IUUC-Acl-008324	Aspergillus clavatus	44.79	1.00e-92	332.00
IUUC-Afl-008607	Aspergillus flavus	46.98	1.00e-86	311.00
IUUC-Afu-008998	Aspergillus fumigatus	45.63	2.00e-95	341.00
IUUC-Ani-009363	Aspergillus nidulans	45.22	3.00e-95	340.00
IUUC-Ang-009513	Aspergillus niger	42.28	1.00e-82	298.00
IUUC-Aor-010237	Aspergillus oryzae	44.60	8.00e-93	332.00
IUUC-Ate-010374	Aspergillus terreus	43.68	5.00e-83	300.00
IUUC-Ame-010728	Astyanax mexicanus	55.56	1.00e-116	412.00
IUUC-Bgr-012297	Blumeria graminis	44.49	3.00e-68	250.00
IUUC-Bta-012433	Bos taurus	62.09	2.00e-116	411.00
IUUC-Bci-013763	Botrytis cinerea	47.92	3.00e-92	330.00
IUUC-Bdi-014490	Brachypodium distachyon	50.59	1.00e-104	372.00
IUUC-Bol-015154	Brassica oleracea	54.40	9.00e-109	385.00
IUUC-Bra-017008	Brassica rapa	54.72	2.00e-109	388.00
IUUC-Cel-018512	Caenorhabditis elegans	52.92	2.00e-105	374.00
IUUC-Cja-019308	Callithrix jacchus	61.76	4.00e-116	410.00
IUUC-Cfa-020998	Canis familiaris	62.09	2.00e-116	410.00
IUUC-Cpo-021580	Cavia porcellus	62.09	1.00e-116	412.00
IUUC-Cre-022859	Chlamydomonas reinhardtii	51.89	6.00e-102	363.00
IUUC-Csa-023456	Chlorocebus sabaeus	61.76	4.00e-116	410.00
IUUC-Cho-024644	Choloepus hoffmanni	61.81	1.00e-116	411.00
IUUC-Cin-025463	Ciona intestinalis	51.63	3.00e-109	387.00
IUUC-Cgl-026497	Colletotrichum gloeosporioides	42.54	1.00e-90	325.00
IUUC-Cne-026780	Cryptococcus neoformans	39.02	1.00e-65	242.00
IUUC-Dre-027671	Danio rerio	56.43	3.00e-121	427.00
IUUC-Dno-029769	Dasypus novemcinctus	61.54	2.00e-117	414.00
IUUC-Dor-030776	Dipodomys ordii	59.06	1.00e-43	169.00
IUUC-Dse-031316	Dothistroma septosporum	38.57	1.00e-77	282.00
IUUC-Ete-032753	Echinops telfairi	56.86	3.00e-99	353.00
IUUC-Eca-033979	Equus caballus	62.09	2.00e-116	411.00
IUUC-Eeu-034862	Erinaceus europaeus	66.67	3.00e-51	194.00
IUUC-Fca-036110	Felis catus	60.70	5.00e-94	336.00
IUUC-Fal-037648	Ficedula albicollis	60.90	3.00e-116	410.00
IUUC-Fox-037861	Fusarium oxysporum	45.60	1.00e-90	325.00
IUUC-Fso-038405	Fusarium solani	45.93	2.00e-90	324.00
IUUC-Gmo-039383	Gadus morhua	57.60	9.00e-120	422.00
IUUC-Ggr-040082	Gaeumannomyces graminis	44.02	3.00e-83	301.00
IUUC-Gga-040785	Gallus gallus	61.66	1.00e-117	415.00
IUUC-Gac-041645	Gasterosteus aculeatus	60.19	8.00e-115	405.00
IUUC-Gma-043672	Glycine max	53.14	5.00e-105	373.00
IUUC-Ggo-044800	Gorilla gorilla	54.49	8.00e-94	336.00
IUUC-Hsa-045918	Homo sapiens	61.76	4.00e-116	410.00
IUUC-Hvu-047342	Hordeum vulgare	50.58	3.00e-104	370.00
IUUC-Itr-048047	Ictidomys tridecemlineatus	58.33	4.00e-59	219.00
IUUC-Kpa-049149	Komagataella pastoris	33.01	2.00e-38	151.00
IUUC-Lch-050395	Latimeria chalumnae	56.52	5.00e-125	439.00
IUUC-Lpe-051275	Leersia perrieri	50.29	2.00e-104	372.00
IUUC-Loc-052666	Lepisosteus oculatus	58.38	6.00e-114	402.00
IUUC-Lma-053129	Leptosphaeria maculans	39.55	2.00e-83	301.00
IUUC-Laf-054512	Loxodonta africana	62.09	2.00e-116	411.00
IUUC-Mcc-055819	Macaca mulatta	61.76	4.00e-116	410.00
IUUC-Meu-056350	Macropus eugenii	55.88	9.00e-100	355.00
IUUC-Mor-057063	Magnaporthe oryzae	50.16	4.00e-93	333.00
IUUC-Mpo-057369	Magnaporthe poae	46.03	3.00e-82	297.00
IUUC-Mtr-058228	Medicago truncatula	51.89	3.00e-104	370.00
IUUC-Mla-059093	Melampsora laricipopulina	40.06	1.00e-71	262.00
IUUC-Mga-059719	Meleagris gallopavo	61.02	6.00e-117	412.00
IUUC-Mvi-060285	Microbotryum violaceum	39.70	1.00e-66	246.00
IUUC-Mmr-061685	Microcebus murinus	57.84	4.00e-104	370.00
IUUC-Mdo-062121	Monodelphis domestica	61.76	5.00e-116	409.00
IUUC-Mmu-063216	Mus musculus	61.22	2.00e-117	414.00
IUUC-Mac-065463	Musa acuminata	51.46	1.00e-96	345.00
IUUC-Mpu-066390	Mustela putorius furo	61.54	2.00e-117	414.00
IUUC-Mlu-067686	Myotis lucifugus	59.74	1.00e-112	399.00
IUUC-Nfi-068509	Neosartorya fischeri	45.07	1.00e-94	339.00
IUUC-Ncr-068870	Neurospora crassa	48.53	1.00e-92	332.00
IUUC-Nle-069539	Nomascus leucogenys	61.76	5.00e-116	410.00
IUUC-Opr-070555	Ochotona princeps	55.23	7.00e-102	362.00
IUUC-Ont-071490	Oreochromis niloticus	56.80	5.00e-117	413.00
IUUC-Oan-073044	Ornithorhynchus anatinus	51.74	2.00e-96	345.00
IUUC-Ocu-073764	Oryctolagus cuniculus	61.54	1.00e-117	415.00
IUUC-Oba-075704	Oryza barthii	51.90	1.00e-103	369.00
IUUC-Obr-076455	Oryza brachyantha	50.29	8.00e-104	369.00
IUUC-Ogl-077382	Oryza glaberrima	50.59	6.00e-104	369.00
IUUC-Ogu-078739	Oryza glumaepatula	51.58	2.00e-103	368.00
IUUC-Oin-079072	Oryza indica	51.58	2.00e-103	368.00
IUUC-Olo-080809	Oryza longistaminata	51.58	2.00e-103	368.00
IUUC-Ome-081677	Oryza meridionalis	51.27	2.00e-102	364.00
IUUC-Oni-082937	Oryza nivara	51.58	2.00e-103	368.00
IUUC-Opu-083510	Oryza punctata	51.58	2.00e-103	368.00
IUUC-Oru-084360	Oryza rufipogon	50.29	2.00e-103	368.00
IUUC-Osa-085640	Oryza sativa	50.29	1.00e-103	369.00
IUUC-Ola-086504	Oryzias latipes	56.29	4.00e-117	413.00
IUUC-Olu-087869	Ostreococcus lucimarinus	41.33	2.00e-61	228.00
IUUC-Oga-088773	Otolemur garnettii	62.09	2.00e-116	410.00
IUUC-Oar-089677	Ovis aries	61.49	8.00e-115	405.00
IUUC-Ptr-090724	Pan troglodytes	60.68	2.00e-109	388.00
IUUC-Pan-092683	Papio anubis	61.76	4.00e-116	410.00
IUUC-Psi-093415	Pelodiscus sinensis	62.09	1.00e-116	411.00
IUUC-Pma-094562	Petromyzon marinus	53.06	4.00e-118	417.00
IUUC-Pno-095014	Phaeosphaeria nodorum	43.07	1.00e-83	302.00
IUUC-Ppa-095822	Physcomitrella patens	54.84	1.00e-107	382.00
IUUC-Pfo-096579	Poecilia formosa	61.17	2.00e-115	407.00
IUUC-Pab-098313	Pongo abelii	61.76	4.00e-116	410.00
IUUC-Pop-099747	Populus trichocarpa	54.52	8.00e-106	375.00
IUUC-Pca-100871	Procavia capensis	53.76	1.00e-84	305.00
IUUC-Ppe-101389	Prunus persica	52.58	7.00e-105	372.00
IUUC-Pva-102468	Pteropus vampyrus	49.35	3.00e-83	301.00
IUUC-Pgr-103523	Puccinia graminis	39.56	4.00e-75	273.00
IUUC-Ptt-103930	Puccinia triticina	40.00	1.00e-73	269.00
IUUC-Pte-104299	Pyrenophora teres	43.06	2.00e-87	314.00
IUUC-Pyt-104564	Pyrenophora triticirepentis	43.06	1.00e-88	319.00
IUUC-Rno-105796	Rattus norvegicus	61.81	2.00e-116	411.00
IUUC-Sha-107191	Sarcophilus harrisii	61.76	5.00e-116	409.00
IUUC-Sja-107952	Schizosaccharomyces japonicus	36.36	4.00e-64	237.00
IUUC-Spo-108249	Schizosaccharomyces pombe	42.19	4.00e-78	284.00
IUUC-Ssl-108448	Sclerotinia sclerotiorum	46.56	4.00e-92	330.00
IUUC-Sit-110805	Setaria italica	50.00	1.00e-103	369.00
IUUC-Sly-111567	Solanum lycopersicum	52.70	1.00e-105	375.00
IUUC-Stu-112562	Solanum tuberosum	52.70	3.00e-106	377.00
IUUC-Sar-112991	Sorex araneus	61.47	5.00e-80	289.00
IUUC-Sbi-114010	Sorghum bicolor	49.56	1.00e-103	368.00
IUUC-Sre-114947	Sporisorium reilianum	42.34	5.00e-74	270.00
IUUC-Ssc-115371	Sus scrofa	62.09	2.00e-116	411.00
IUUC-Tgu-117429	Taeniopygia guttata	61.44	3.00e-116	410.00
IUUC-Tru-118081	Takifugu rubripes	60.38	3.00e-116	410.00
IUUC-Tsy-119101	Tarsius syrichta	54.25	8.00e-96	342.00
IUUC-Tni-120532	Tetraodon nigroviridis	60.32	1.00e-115	408.00
IUUC-Tca-121373	Theobroma cacao	55.16	8.00e-107	379.00
IUUC-Tre-122050	Trichoderma reesei	47.23	3.00e-92	330.00
IUUC-Tvi-122394	Trichoderma virens	45.55	1.00e-85	308.00
IUUC-Tae-124661	Triticum aestivum	50.73	1.00e-103	368.00
IUUC-Tme-126998	Tuber melanosporum	49.35	4.00e-92	330.00
IUUC-Tbe-128032	Tupaia belangeri	62.42	2.00e-116	411.00
IUUC-Ttr-129102	Tursiops truncatus	53.92	1.00e-94	338.00
IUUC-Uma-129363	Ustilago maydis	43.54	1.00e-77	282.00
IUUC-Vda-129891	Verticillium dahliae	46.58	5.00e-90	323.00
IUUC-Vpa-130827	Vicugna pacos	61.76	6.00e-116	409.00
IUUC-Vvi-131202	Vitis vinifera	52.58	2.00e-104	371.00
IUUC-Xtr-132769	Xenopus tropicalis	60.40	1.00e-110	391.00
IUUC-Xma-133147	Xiphophorus maculatus	61.17	2.00e-115	407.00
IUUC-Yli-134352	Yarrowia lipolytica	34.32	1.00e-37	149.00
IUUC-Zma-135164	Zea mays	51.96	6.00e-102	362.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence