iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Dme-031998

Ensembl Protein ID

FBpp0088208

UniProt Accession

Q86P06; Q7KQN8; Q86P06_DROME

Genbank Protein ID

AAO39551.1; AAS64605.2; ABB36445.1

Protein Name

Nuclear factor I, isoform B; RE01666p; RE01983p

Genbank Nucleotide ID

BT003547; AE014135; BT023941

Gene Name

NfI; CG2380-RB; DmelCG2380; NFI; CG2380; Dmel_CG2380

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
FBgn0042696	FBtr0089141	FBpp0088208
FBgn0042696	FBtr0333678	FBpp0305834

Annotation

mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
microRNA	TRANSFAC	RAID2
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/DCX/DDB1	38.30	4.50e-01	31.60	IUUC-Sce-106248

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Drosophila melanogaster

Protein Sequence
(Fasta)

MFIPETLRGC MIETDVSSYL QTSSSGQDEF HPFIEALLPY VKSFSYSWFN LQAAKRKYYK 60
KHEKRMSLEE ERHCKDELQN EKTEVKQKWA SRLLGKLRKD ITQESREDFV QSIIGKRKSI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTAGTCTATA AGCACAAGTT TTGCATAACA CAGCTACTCA GTTATTGTTC CGTGTACTAG 60
AAATTGCCTT TATATACATG TAAGTGTTAA CAAAAAAAAT ATGAAATTGT GTTTTTCACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0010--Activator
KW-0181--Complete proteome
KW-0235--DNA replication
KW-0238--DNA-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR000647--CTF/NFI
IPR020604--CTF/NFI_DNA-bd-dom
IPR019548--CTF/NFI_DNA-bd_N
IPR003619--MAD_homology1_Dwarfin-type

PROSITE

PS51080--CTF_NFI_2

Pfam

PF03165--MH1
PF10524--NfI_DNAbd_pre-N

SMART

SM00523--DWA

Gene Ontology

GO:0005634--C:nucleus
GO:0003677--F:DNA binding
GO:0000981--F:RNA polymerase II transcription factor activity, sequence-specific DNA binding
GO:0006260--P:DNA replication
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter
GO:0045944--P:positive regulation of transcription from RNA polymerase II promoter
GO:0006351--P:transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Dre-028382	Danio rerio	35.90	2.80e-01	29.60
IUUC-Oan-073212	Ornithorhynchus anatinus	37.50	1.80e-01	27.70
IUUC-Sce-106248	Saccharomyces cerevisiae	38.30	1.70e-01	31.60
IUUC-Spo-108201	Schizosaccharomyces pombe	28.32	8.50e-02	30.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence