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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Sce-106229
Ensembl Protein ID YAR003W
UniProt Accession P39706; D6VPL8; SWD1_YEAST
Genbank Protein ID AAC04959.1; DAA06988.1
Protein Name COMPASS component SWD1; Complex proteins associated with SET1 protein SWD1; Set1C component SWD1
Genbank Nucleotide ID L22015; BK006935
Gene Name SWD1; CPS50; SAF49; YAR003W; FUN16
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
YAR003W YAR003W YAR003W
Annotation
mRNA Expression
GEOFFGED
Protein-protein Interaction
IIDiRefIndexHINTMentha
Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 4.40e-14 50.6 71 103
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           H  ++t++a+ +d +ll+++s+D +ik+WDl++
   Q: 71   HVRPITSIAWsPDgRLLLTSSRDWSIKLWDLSK 103
           999********999****************975 PP
   
Organism Saccharomyces cerevisiae
Functional Description
(View)

Functional Description


     The COMPASS (Set1C) complex specifically mono-, di- and trimethylates histone H3 to form H3K4me1/2/3, which subsequently plays a role in telomere length maintenance and transcription elongation regulation.
 The COMPASS (Set1C) complex specifically mono-, di- and trimethylates histone H3 to form H3K4me1/2/3, which subsequently plays a role in telomere length maintenance and transcription elongation regulation.
Protein Sequence
(Fasta)
MNILLQDPFA VLKEHPEKLT HTIENPLRTE CLQFSPCGDY LALGCANGAL VIYDMDTFRP 60
ICVPGNMLGA HVRPITSIAW SPDGRLLLTS SRDWSIKLWD LSKPSKPLKE IRFDSPIWGC 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Sce-106229|E3,WD_repeat|Saccharomyces cerevisiae
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGAACATCC TTTTACAGGA TCCATTCGCT GTTCTTAAGG AACATCCTGA GAAGCTCACA 60
CATACGATTG AGAACCCTTT ACGCACTGAA TGTCTCCAGT TCAGTCCTTG CGGTGATTAC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Sce-106229|E3,WD_repeat|Saccharomyces cerevisiae
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0158--Chromosome
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0779--Telomere
KW-0853--WD repeat
Interpro

IPR027295--Quinoprotein_ADH-like_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
SMART

SM00320--WD40
Gene Ontology

GO:0000781--C:chromosome, telomeric region
GO:0048188--C:Set1C/COMPASS complex
GO:0000922--C:spindle pole
GO:0006348--P:chromatin silencing at telomere
GO:0051568--P:histone H3-K4 methylation
GO:0006355--P:regulation of transcription, DNA-templated
GO:0000723--P:telomere maintenance
KEGG sce:YAR003W
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000616 Aegilops tauschii 26.98 9.00e-27 113.00
IUUC-Aml-002118 Ailuropoda melanoleuca 29.53 1.00e-27 115.00
IUUC-Atr-002777 Amborella trichopoda 25.62 2.00e-26 111.00
IUUC-Apl-004056 Anas platyrhynchos 29.92 4.00e-27 114.00
IUUC-Aca-004999 Anolis carolinensis 29.92 1.00e-27 115.00
IUUC-Aly-006092 Arabidopsis lyrata 30.13 1.00e-31 129.00
IUUC-Ath-006947 Arabidopsis thaliana 29.01 7.00e-32 129.00
IUUC-Ago-007753 Ashbya gossypii 57.04 5.00e-141 492.00
IUUC-Acl-008105 Aspergillus clavatus 35.47 2.00e-58 218.00
IUUC-Afl-008633 Aspergillus flavus 36.27 1.00e-60 225.00
IUUC-Afu-009075 Aspergillus fumigatus 33.58 3.00e-38 150.00
IUUC-Ani-009233 Aspergillus nidulans 38.27 1.00e-69 254.00
IUUC-Ang-009695 Aspergillus niger 36.53 4.00e-60 223.00
IUUC-Aor-009988 Aspergillus oryzae 36.27 1.00e-60 225.00
IUUC-Ate-010313 Aspergillus terreus 35.47 4.00e-60 223.00
IUUC-Ame-011134 Astyanax mexicanus 30.52 2.00e-27 115.00
IUUC-Bgr-012302 Blumeria graminis 33.78 9.00e-55 205.00
IUUC-Bta-012946 Bos taurus 29.65 3.00e-28 117.00
IUUC-Bci-013968 Botrytis cinerea 33.42 3.00e-56 210.00
IUUC-Bdi-014387 Brachypodium distachyon 29.06 2.00e-36 144.00
IUUC-Bra-017414 Brassica rapa 28.39 2.00e-29 121.00
IUUC-Cel-018610 Caenorhabditis elegans 29.60 1.00e-31 129.00
IUUC-Cja-019938 Callithrix jacchus 29.53 1.00e-27 115.00
IUUC-Cfa-020726 Canis familiaris 29.38 1.00e-27 115.00
IUUC-Cpo-021560 Cavia porcellus 28.71 6.00e-24 102.00
IUUC-Cre-022588 Chlamydomonas reinhardtii 36.84 2.00e-19 88.20
IUUC-Csa-024192 Chlorocebus sabaeus 29.65 3.00e-28 117.00
IUUC-Cho-024355 Choloepus hoffmanni 29.65 1.00e-28 119.00
IUUC-Cin-025285 Ciona intestinalis 29.19 8.00e-33 132.00
IUUC-Csv-026366 Ciona savignyi 28.38 3.00e-31 127.00
IUUC-Cgl-026450 Colletotrichum gloeosporioides 37.82 1.00e-47 182.00
IUUC-Cne-027092 Cryptococcus neoformans 28.00 2.00e-35 141.00
IUUC-Cme-027137 Cyanidioschyzon merolae 30.82 5.00e-20 90.50
IUUC-Dre-027374 Danio rerio 29.57 2.00e-27 115.00
IUUC-Dno-030003 Dasypus novemcinctus 29.61 3.00e-23 101.00
IUUC-Dor-030355 Dipodomys ordii 29.65 3.00e-28 117.00
IUUC-Dse-031442 Dothistroma septosporum 35.68 2.00e-63 234.00
IUUC-Dme-031932 Drosophila melanogaster 29.87 4.00e-34 137.00
IUUC-Ete-032858 Echinops telfairi 29.02 5.00e-17 80.50
IUUC-Eca-034217 Equus caballus 29.65 2.00e-28 118.00
IUUC-Eeu-035024 Erinaceus europaeus 29.76 3.00e-29 121.00
IUUC-Fca-035370 Felis catus 29.53 1.00e-27 115.00
IUUC-Fal-036628 Ficedula albicollis 30.18 7.00e-27 113.00
IUUC-Fox-037739 Fusarium oxysporum 36.39 2.00e-49 187.00
IUUC-Fso-038094 Fusarium solani 35.88 1.00e-50 191.00
IUUC-Gmo-039088 Gadus morhua 29.81 6.00e-27 113.00
IUUC-Ggr-040063 Gaeumannomyces graminis 37.90 4.00e-62 230.00
IUUC-Gga-041160 Gallus gallus 30.03 5.00e-28 117.00
IUUC-Gac-041333 Gasterosteus aculeatus 29.84 3.00e-27 114.00
IUUC-Gma-043909 Glycine max 28.82 4.00e-30 124.00
IUUC-Ggo-044657 Gorilla gorilla 29.65 3.00e-28 117.00
IUUC-Hsa-045894 Homo sapiens 29.65 3.00e-28 117.00
IUUC-Hvu-047662 Hordeum vulgare 26.77 2.00e-28 118.00
IUUC-Itr-048125 Ictidomys tridecemlineatus 30.47 3.00e-27 114.00
IUUC-Kpa-049095 Komagataella pastoris 42.30 2.00e-73 267.00
IUUC-Lch-049495 Latimeria chalumnae 33.94 1.00e-15 75.50
IUUC-Lpe-051038 Leersia perrieri 28.29 2.00e-25 108.00
IUUC-Loc-052680 Lepisosteus oculatus 30.48 9.00e-29 119.00
IUUC-Laf-053717 Loxodonta africana 29.53 2.00e-27 115.00
IUUC-Mcc-055007 Macaca mulatta 30.47 3.00e-27 114.00
IUUC-Meu-056494 Macropus eugenii 36.84 8.00e-08 50.10
IUUC-Mor-057173 Magnaporthe oryzae 38.07 4.00e-63 233.00
IUUC-Mpo-057622 Magnaporthe poae 37.47 3.00e-62 230.00
IUUC-Mtr-057672 Medicago truncatula 27.71 2.00e-31 128.00
IUUC-Mla-059057 Melampsora laricipopulina 28.50 2.00e-36 144.00
IUUC-Mga-060037 Meleagris gallopavo 29.64 4.00e-27 114.00
IUUC-Mvi-060321 Microbotryum violaceum 25.68 3.00e-31 127.00
IUUC-Mmr-060755 Microcebus murinus 30.47 4.00e-27 114.00
IUUC-Mdo-061859 Monodelphis domestica 29.38 4.00e-28 117.00
IUUC-Mmu-063755 Mus musculus 29.65 3.00e-28 117.00
IUUC-Mac-065292 Musa acuminata 28.94 3.00e-30 125.00
IUUC-Mpu-065896 Mustela putorius furo 29.65 2.00e-28 118.00
IUUC-Mlu-067927 Myotis lucifugus 29.53 2.00e-27 115.00
IUUC-Nfi-068429 Neosartorya fischeri 35.47 4.00e-60 223.00
IUUC-Ncr-068738 Neurospora crassa 35.37 1.00e-55 208.00
IUUC-Nle-069608 Nomascus leucogenys 29.65 3.00e-28 117.00
IUUC-Opr-070319 Ochotona princeps 29.53 1.00e-27 115.00
IUUC-Ont-071451 Oreochromis niloticus 29.57 1.00e-27 115.00
IUUC-Oan-073445 Ornithorhynchus anatinus 29.01 2.00e-26 111.00
IUUC-Ocu-074341 Oryctolagus cuniculus 29.65 3.00e-28 117.00
IUUC-Oba-075664 Oryza barthii 27.90 5.00e-26 110.00
IUUC-Obr-076630 Oryza brachyantha 28.40 9.00e-27 112.00
IUUC-Ogl-077847 Oryza glaberrima 27.90 5.00e-26 110.00
IUUC-Ogu-077970 Oryza glumaepatula 27.61 4.00e-25 107.00
IUUC-Oin-079374 Oryza indica 27.90 7.00e-26 110.00
IUUC-Olo-080992 Oryza longistaminata 27.90 7.00e-26 110.00
IUUC-Ome-081683 Oryza meridionalis 27.65 2.00e-25 108.00
IUUC-Oni-082594 Oryza nivara 27.90 7.00e-26 110.00
IUUC-Opu-083907 Oryza punctata 27.90 7.00e-26 109.00
IUUC-Oru-084400 Oryza rufipogon 27.90 5.00e-26 110.00
IUUC-Osa-085442 Oryza sativa 27.90 5.00e-26 110.00
IUUC-Ola-086569 Oryzias latipes 30.48 6.00e-28 116.00
IUUC-Oga-088947 Otolemur garnettii 27.45 3.00e-23 101.00
IUUC-Oar-090358 Ovis aries 29.53 2.00e-27 115.00
IUUC-Ptr-091601 Pan troglodytes 29.65 2.00e-28 118.00
IUUC-Pan-092466 Papio anubis 29.65 3.00e-28 117.00
IUUC-Psi-093614 Pelodiscus sinensis 29.92 4.00e-27 114.00
IUUC-Pma-094450 Petromyzon marinus 29.40 6.00e-26 110.00
IUUC-Pno-094819 Phaeosphaeria nodorum 31.50 7.00e-50 189.00
IUUC-Pfo-096312 Poecilia formosa 30.21 1.00e-27 115.00
IUUC-Pab-098058 Pongo abelii 29.65 3.00e-28 117.00
IUUC-Pop-099039 Populus trichocarpa 28.28 1.00e-30 125.00
IUUC-Pca-100623 Procavia capensis 29.65 2.00e-28 118.00
IUUC-Ppe-102053 Prunus persica 28.57 3.00e-31 127.00
IUUC-Pva-102779 Pteropus vampyrus 28.77 4.00e-25 107.00
IUUC-Pgr-103398 Puccinia graminis 31.46 2.00e-41 160.00
IUUC-Ptt-103912 Puccinia triticina 30.61 5.00e-41 160.00
IUUC-Pte-104246 Pyrenophora teres 31.98 2.00e-48 184.00
IUUC-Pyt-104582 Pyrenophora triticirepentis 31.71 4.00e-48 183.00
IUUC-Rno-104838 Rattus norvegicus 29.65 2.00e-28 117.00
IUUC-Sha-106527 Sarcophilus harrisii 29.38 5.00e-28 117.00
IUUC-Sja-107862 Schizosaccharomyces japonicus 37.43 2.00e-62 230.00
IUUC-Spo-108025 Schizosaccharomyces pombe 36.29 3.00e-53 200.00
IUUC-Ssl-108544 Sclerotinia sclerotiorum 32.88 1.00e-55 208.00
IUUC-Smo-109474 Selaginella moellendorffii 27.51 9.00e-23 99.40
IUUC-Sit-110687 Setaria italica 27.48 4.00e-28 117.00
IUUC-Sly-111597 Solanum lycopersicum 26.60 4.00e-27 114.00
IUUC-Stu-112389 Solanum tuberosum 26.34 3.00e-26 110.00
IUUC-Sar-113284 Sorex araneus 32.98 3.00e-16 78.20
IUUC-Sbi-114362 Sorghum bicolor 28.14 2.00e-27 115.00
IUUC-Sre-115146 Sporisorium reilianum 29.05 2.00e-34 138.00
IUUC-Ssc-115604 Sus scrofa 29.53 2.00e-27 115.00
IUUC-Tru-118258 Takifugu rubripes 30.21 2.00e-27 114.00
IUUC-Tsy-119169 Tarsius syrichta 29.73 6.00e-23 100.00
IUUC-Tni-119939 Tetraodon nigroviridis 30.13 2.00e-26 111.00
IUUC-Tca-121010 Theobroma cacao 27.07 4.00e-31 127.00
IUUC-Tre-121944 Trichoderma reesei 36.34 5.00e-51 193.00
IUUC-Tvi-122283 Trichoderma virens 37.18 4.00e-52 196.00
IUUC-Tae-123766 Triticum aestivum 34.31 3.00e-09 55.80
IUUC-Tur-126395 Triticum urartu 26.98 8.00e-27 113.00
IUUC-Tme-127150 Tuber melanosporum 34.95 7.00e-64 235.00
IUUC-Ttr-129187 Tursiops truncatus 29.65 2.00e-28 118.00
IUUC-Uma-129654 Ustilago maydis 28.05 1.00e-31 129.00
IUUC-Vda-129788 Verticillium dahliae 34.84 8.00e-60 222.00
IUUC-Vpa-130182 Vicugna pacos 29.79 8.00e-20 89.40
IUUC-Vvi-131557 Vitis vinifera 29.11 1.00e-33 135.00
IUUC-Xtr-132007 Xenopus tropicalis 30.29 4.00e-29 120.00
IUUC-Xma-133909 Xiphophorus maculatus 29.95 2.00e-27 115.00
IUUC-Yli-134524 Yarrowia lipolytica 38.46 2.00e-66 244.00
IUUC-Zma-134821 Zea mays 28.32 7.00e-28 116.00
Created Date 25-Jun-2017

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