iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Rno-104840

Ensembl Protein ID

ENSRNOP00000016066.4

UniProt Accession

A0A0H2UHJ4; A0A0H2UHJ4_RAT

Genbank Protein ID

ENSRNOP00000016066

Protein Name

Integrator complex subunit 12

Genbank Nucleotide ID

AABR07013462

Gene Name

Ints12

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000011844.6	ENSRNOT00000016066.6	ENSRNOP00000016066.4

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
microRNA	TRANSFAC	miRNAMap	RAID2
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	1.70e-08	34.9	167	219

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 4    ClvCgeggedek.slveCekCrewfHpaClklsveeelpnsek..wiCpkCrs 53
           C vC++ +  +  +lveC++C++ +H++C+k++v ++  n+ +  w+C +C++
   Q: 167  CVVCRQMTVASGnQLVECQECHNLYHQDCHKPQVTDKEVNDPRlvWYCARCTR 219
           ******9988756********************888888876689******86 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MQLVLAMAAT VNLELDPIFL KALGFLHSKS KDSAEKLKTL LDESLARGID ASYRPAQKDV 60
EPPKISSTKS LSIKQEPKTS SSLPSGSSNG KVLAAEKLKK EAEKRPADKM KDATEGVDVP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTTATTTTA ATAATTCCTT GCCTAGAAGG TATTTGTAAA AAGGACAGCC AAAAATAGAA 60
CCACATGATA ACATTGGTAT TAACTGGAGA CAAAACTTGA GTGCTGAGAA TTTTGCAGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF00628--PHD

SMART

SM00249--PHD

Gene Ontology

GO:0032039--C:integrator complex
GO:0008270--F:zinc ion binding
GO:0016180--P:snRNA processing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001485	Ailuropoda melanoleuca	89.36	2.00e-166	578.00
IUUC-Apl-003539	Anas platyrhynchos	77.70	1.00e-145	509.00
IUUC-Bta-013090	Bos taurus	90.47	3.00e-148	518.00
IUUC-Cja-019984	Callithrix jacchus	90.47	8.00e-156	543.00
IUUC-Cfa-020068	Canis familiaris	90.47	1.00e-170	592.00
IUUC-Cpo-021446	Cavia porcellus	88.03	2.00e-138	485.00
IUUC-Csa-023385	Chlorocebus sabaeus	90.91	3.00e-163	568.00
IUUC-Cho-025018	Choloepus hoffmanni	90.69	2.00e-155	541.00
IUUC-Dre-027546	Danio rerio	63.45	5.00e-95	341.00
IUUC-Dno-029989	Dasypus novemcinctus	90.31	1.00e-155	542.00
IUUC-Eca-033999	Equus caballus	88.47	2.00e-155	542.00
IUUC-Fca-035522	Felis catus	90.47	2.00e-161	562.00
IUUC-Gga-041056	Gallus gallus	75.33	1.00e-144	506.00
IUUC-Gac-042508	Gasterosteus aculeatus	59.23	3.00e-88	318.00
IUUC-Ggo-044647	Gorilla gorilla	90.23	2.00e-122	432.00
IUUC-Hsa-046655	Homo sapiens	90.47	2.00e-152	531.00
IUUC-Loc-052933	Lepisosteus oculatus	60.90	1.00e-100	360.00
IUUC-Laf-054471	Loxodonta africana	90.24	4.00e-164	570.00
IUUC-Mcc-055568	Macaca mulatta	90.91	3.00e-163	568.00
IUUC-Meu-056037	Macropus eugenii	86.80	1.00e-144	506.00
IUUC-Mga-059569	Meleagris gallopavo	74.67	4.00e-143	501.00
IUUC-Mmr-061180	Microcebus murinus	92.02	2.00e-157	548.00
IUUC-Mdo-062528	Monodelphis domestica	85.34	3.00e-152	531.00
IUUC-Mmu-064122	Mus musculus	96.22	6.00e-160	556.00
IUUC-Mpu-066477	Mustela putorius furo	91.13	1.00e-160	559.00
IUUC-Mlu-067391	Myotis lucifugus	91.13	9.00e-154	536.00
IUUC-Nle-069599	Nomascus leucogenys	90.02	1.00e-146	513.00
IUUC-Opr-070713	Ochotona princeps	88.69	2.00e-142	498.00
IUUC-Ont-072565	Oreochromis niloticus	63.66	2.00e-84	306.00
IUUC-Oan-073115	Ornithorhynchus anatinus	83.96	5.00e-107	380.00
IUUC-Ocu-074717	Oryctolagus cuniculus	91.13	3.00e-154	538.00
IUUC-Ola-087458	Oryzias latipes	68.09	6.00e-88	317.00
IUUC-Oga-088704	Otolemur garnettii	92.02	1.00e-158	552.00
IUUC-Oar-089184	Ovis aries	90.91	5.00e-150	524.00
IUUC-Ptr-091021	Pan troglodytes	90.02	4.00e-155	541.00
IUUC-Pan-091963	Papio anubis	90.91	3.00e-163	568.00
IUUC-Psi-093012	Pelodiscus sinensis	78.37	3.00e-137	481.00
IUUC-Pab-097870	Pongo abelii	90.24	2.00e-152	531.00
IUUC-Pca-100164	Procavia capensis	89.36	2.00e-160	558.00
IUUC-Pva-102873	Pteropus vampyrus	90.69	3.00e-153	534.00
IUUC-Sha-106551	Sarcophilus harrisii	84.51	3.00e-149	521.00
IUUC-Tsy-119236	Tarsius syrichta	86.03	6.00e-161	560.00
IUUC-Tni-120510	Tetraodon nigroviridis	65.57	8.00e-98	350.00
IUUC-Tbe-127947	Tupaia belangeri	83.37	5.00e-139	487.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence