iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
miRNAMap	RAID2
Protein-protein Interaction
IID
Post-translational Modifications (PTMs)
dbPAF	PhosphositePlus
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-22	79.0	253	289

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrtgv 34
           gHtd v +l++  +  + l+s+s D t+ +WDl+ g+
   Q: 253  GHTDAVLDLSWnkTVrNVLASASADSTVILWDLSVGK 289
           8**********9633689**************98776 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MNRSRQVTCV AWVRRGVAKE TPDKVELSKE EVKRLIAEAK EKLQEEGGSE EEEVGSPSED 60
GMQRARVQAR PTEPLEDGDP QDDRTLDDDE LAEYDLDNYD QEDNPDAETI GESLLGLTVY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTCATAGTC TCTCCCAGCG ACCAGGTGTC TTGTTCGCGC TGGGTTCAAG CGGAACATCA 60
TGAACCGCAG CCGCCAAGTG ACCTGCGTGG CCTGGGTCCG CCGCGGCGTG GCCAAAGAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005794--C:Golgi apparatus
GO:0005730--C:nucleolus
GO:0005634--C:nucleus
GO:0034773--P:histone H4-K20 trimethylation
GO:1903262--P:negative regulation of serine phosphorylation of STAT3 protein
GO:2000738--P:positive regulation of stem cell differentiation

KEGG

rno:362856

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000884	Aegilops tauschii	35.13	1.00e-57	216.00
IUUC-Aml-001975	Ailuropoda melanoleuca	89.80	0.00e+00	825.00
IUUC-Atr-002719	Amborella trichopoda	37.25	2.00e-54	206.00
IUUC-Apl-004171	Anas platyrhynchos	78.49	3.00e-175	607.00
IUUC-Aca-005184	Anolis carolinensis	69.75	0.00e+00	637.00
IUUC-Aly-005967	Arabidopsis lyrata	34.41	5.00e-63	235.00
IUUC-Ath-006878	Arabidopsis thaliana	36.02	3.00e-57	216.00
IUUC-Ago-007922	Ashbya gossypii	34.62	7.00e-54	205.00
IUUC-Acl-008064	Aspergillus clavatus	35.18	2.00e-76	279.00
IUUC-Afl-008590	Aspergillus flavus	41.69	4.00e-74	271.00
IUUC-Afu-009081	Aspergillus fumigatus	39.22	2.00e-87	316.00
IUUC-Ani-009187	Aspergillus nidulans	37.90	8.00e-81	294.00
IUUC-Aor-010018	Aspergillus oryzae	41.84	2.00e-73	269.00
IUUC-Ate-010542	Aspergillus terreus	42.38	5.00e-56	211.00
IUUC-Ame-011810	Astyanax mexicanus	67.80	6.00e-180	623.00
IUUC-Bgr-012023	Blumeria graminis	35.73	1.00e-71	264.00
IUUC-Bta-012671	Bos taurus	89.40	0.00e+00	816.00
IUUC-Bci-013981	Botrytis cinerea	34.87	5.00e-68	252.00
IUUC-Bdi-014598	Brachypodium distachyon	39.90	4.00e-69	255.00
IUUC-Bol-016451	Brassica oleracea	34.52	2.00e-64	240.00
IUUC-Bra-017210	Brassica rapa	34.78	3.00e-64	239.00
IUUC-Cel-018525	Caenorhabditis elegans	37.08	1.00e-65	243.00
IUUC-Cja-018931	Callithrix jacchus	89.80	0.00e+00	777.00
IUUC-Cfa-020421	Canis familiaris	90.00	0.00e+00	768.00
IUUC-Cpo-022066	Cavia porcellus	84.89	0.00e+00	810.00
IUUC-Cre-022807	Chlamydomonas reinhardtii	37.26	8.00e-74	271.00
IUUC-Csa-024120	Chlorocebus sabaeus	87.85	0.00e+00	803.00
IUUC-Cho-024765	Choloepus hoffmanni	73.95	1.00e-157	549.00
IUUC-Cin-025441	Ciona intestinalis	42.52	9.00e-73	267.00
IUUC-Csv-025867	Ciona savignyi	32.85	2.00e-22	99.00
IUUC-Cgl-026678	Colletotrichum gloeosporioides	39.57	2.00e-68	253.00
IUUC-Cne-026879	Cryptococcus neoformans	32.58	9.00e-58	218.00
IUUC-Cme-027322	Cyanidioschyzon merolae	24.70	2.00e-19	90.50
IUUC-Dre-027584	Danio rerio	67.63	6.00e-180	623.00
IUUC-Dno-029634	Dasypus novemcinctus	88.60	0.00e+00	850.00
IUUC-Dor-030767	Dipodomys ordii	88.45	0.00e+00	718.00
IUUC-Dse-031449	Dothistroma septosporum	33.86	1.00e-72	266.00
IUUC-Dme-032070	Drosophila melanogaster	36.25	1.00e-73	270.00
IUUC-Ete-032857	Echinops telfairi	82.96	5.00e-132	464.00
IUUC-Eca-033871	Equus caballus	83.83	0.00e+00	745.00
IUUC-Eeu-034899	Erinaceus europaeus	86.80	0.00e+00	812.00
IUUC-Fca-036260	Felis catus	89.80	0.00e+00	767.00
IUUC-Fal-036704	Ficedula albicollis	76.90	6.00e-174	603.00
IUUC-Fox-037875	Fusarium oxysporum	38.38	1.00e-45	177.00
IUUC-Fso-038104	Fusarium solani	41.24	6.00e-70	258.00
IUUC-Gmo-038715	Gadus morhua	70.90	5.00e-156	544.00
IUUC-Ggr-040060	Gaeumannomyces graminis	34.67	7.00e-70	258.00
IUUC-Gga-040402	Gallus gallus	70.50	0.00e+00	691.00
IUUC-Gac-042618	Gasterosteus aculeatus	72.09	6.00e-163	567.00
IUUC-Gma-044165	Glycine max	37.87	5.00e-64	238.00
IUUC-Ggo-044778	Gorilla gorilla	79.21	0.00e+00	747.00
IUUC-Hsa-046975	Homo sapiens	88.42	0.00e+00	790.00
IUUC-Hvu-047774	Hordeum vulgare	36.00	2.00e-33	135.00
IUUC-Itr-048829	Ictidomys tridecemlineatus	89.40	0.00e+00	778.00
IUUC-Kpa-049194	Komagataella pastoris	32.01	3.00e-54	206.00
IUUC-Lch-049524	Latimeria chalumnae	65.27	2.00e-166	578.00
IUUC-Lpe-050918	Leersia perrieri	37.19	3.00e-62	232.00
IUUC-Loc-051947	Lepisosteus oculatus	68.55	0.00e+00	654.00
IUUC-Lma-053310	Leptosphaeria maculans	35.63	1.00e-73	270.00
IUUC-Laf-053737	Loxodonta africana	88.80	0.00e+00	835.00
IUUC-Mcc-054770	Macaca mulatta	88.22	0.00e+00	806.00
IUUC-Meu-056892	Macropus eugenii	68.87	3.00e-118	418.00
IUUC-Mor-057110	Magnaporthe oryzae	38.83	2.00e-70	259.00
IUUC-Mpo-057610	Magnaporthe poae	38.68	2.00e-42	166.00
IUUC-Mtr-058677	Medicago truncatula	35.11	7.00e-71	261.00
IUUC-Mla-059056	Melampsora laricipopulina	33.14	3.00e-70	259.00
IUUC-Mga-059434	Meleagris gallopavo	75.00	3.00e-175	607.00
IUUC-Mvi-060307	Microbotryum violaceum	38.67	1.00e-74	273.00
IUUC-Mmr-061729	Microcebus murinus	89.20	0.00e+00	800.00
IUUC-Mdo-062905	Monodelphis domestica	73.54	0.00e+00	704.00
IUUC-Mmu-063191	Mus musculus	95.01	0.00e+00	898.00
IUUC-Mac-064937	Musa acuminata	39.63	3.00e-62	232.00
IUUC-Mpu-066036	Mustela putorius furo	89.80	0.00e+00	784.00
IUUC-Mlu-068240	Myotis lucifugus	88.05	0.00e+00	794.00
IUUC-Nfi-068446	Neosartorya fischeri	38.04	4.00e-81	295.00
IUUC-Ncr-068630	Neurospora crassa	41.22	3.00e-67	249.00
IUUC-Nle-069444	Nomascus leucogenys	88.42	0.00e+00	790.00
IUUC-Opr-070284	Ochotona princeps	82.98	0.00e+00	650.00
IUUC-Ont-071946	Oreochromis niloticus	66.81	6.00e-175	607.00
IUUC-Oan-073312	Ornithorhynchus anatinus	81.99	0.00e+00	646.00
IUUC-Ocu-074548	Oryctolagus cuniculus	90.20	0.00e+00	778.00
IUUC-Oba-075486	Oryza barthii	39.80	1.00e-61	230.00
IUUC-Obr-076759	Oryza brachyantha	40.20	5.00e-65	241.00
IUUC-Ogu-078324	Oryza glumaepatula	37.60	8.00e-53	201.00
IUUC-Oin-079455	Oryza indica	40.40	1.00e-70	260.00
IUUC-Olo-080518	Oryza longistaminata	39.64	1.00e-60	227.00
IUUC-Ome-081585	Oryza meridionalis	38.68	9.00e-59	221.00
IUUC-Oni-082084	Oryza nivara	40.46	2.00e-66	246.00
IUUC-Opu-084114	Oryza punctata	39.95	6.00e-66	244.00
IUUC-Oru-084211	Oryza rufipogon	40.46	2.00e-66	246.00
IUUC-Osa-085974	Oryza sativa	40.40	1.00e-70	260.00
IUUC-Ola-087544	Oryzias latipes	65.51	9.00e-178	616.00
IUUC-Olu-087732	Ostreococcus lucimarinus	37.14	8.00e-61	228.00
IUUC-Oga-088626	Otolemur garnettii	89.20	0.00e+00	797.00
IUUC-Oar-089641	Ovis aries	86.06	0.00e+00	813.00
IUUC-Ptr-091379	Pan troglodytes	88.42	0.00e+00	790.00
IUUC-Pan-092669	Papio anubis	81.94	0.00e+00	747.00
IUUC-Psi-093753	Pelodiscus sinensis	78.70	0.00e+00	643.00
IUUC-Pma-094478	Petromyzon marinus	69.72	5.00e-113	400.00
IUUC-Pno-095033	Phaeosphaeria nodorum	38.42	1.00e-72	267.00
IUUC-Ppa-095650	Physcomitrella patens	38.70	1.00e-73	270.00
IUUC-Pfo-097516	Poecilia formosa	66.87	1.00e-179	622.00
IUUC-Pab-097912	Pongo abelii	83.40	8.00e-113	399.00
IUUC-Pop-099606	Populus trichocarpa	36.12	8.00e-71	261.00
IUUC-Pca-100653	Procavia capensis	82.00	1.00e-175	609.00
IUUC-Ppe-101910	Prunus persica	37.70	1.00e-69	256.00
IUUC-Pva-103106	Pteropus vampyrus	88.60	0.00e+00	771.00
IUUC-Pgr-103382	Puccinia graminis	34.78	2.00e-68	253.00
IUUC-Ptt-103725	Puccinia triticina	33.63	2.00e-31	130.00
IUUC-Pte-104400	Pyrenophora teres	39.44	2.00e-72	266.00
IUUC-Pyt-104707	Pyrenophora triticirepentis	35.86	3.00e-72	265.00
IUUC-Sce-106279	Saccharomyces cerevisiae	32.58	1.00e-52	200.00
IUUC-Sha-106556	Sarcophilus harrisii	76.04	0.00e+00	706.00
IUUC-Sja-107920	Schizosaccharomyces japonicus	35.14	5.00e-58	218.00
IUUC-Spo-108023	Schizosaccharomyces pombe	36.04	4.00e-67	248.00
IUUC-Ssl-108635	Sclerotinia sclerotiorum	39.63	9.00e-68	251.00
IUUC-Smo-109124	Selaginella moellendorffii	37.37	2.00e-63	236.00
IUUC-Sit-110604	Setaria italica	39.25	3.00e-71	262.00
IUUC-Sly-111400	Solanum lycopersicum	35.41	1.00e-63	237.00
IUUC-Stu-112208	Solanum tuberosum	39.91	5.00e-43	168.00
IUUC-Sar-113458	Sorex araneus	61.00	3.00e-95	342.00
IUUC-Sbi-114069	Sorghum bicolor	38.40	2.00e-69	256.00
IUUC-Sre-115034	Sporisorium reilianum	34.78	5.00e-66	245.00
IUUC-Ssc-115281	Sus scrofa	89.00	0.00e+00	778.00
IUUC-Tgu-117052	Taeniopygia guttata	63.77	6.00e-166	577.00
IUUC-Tru-118113	Takifugu rubripes	67.86	7.00e-177	613.00
IUUC-Tsy-119546	Tarsius syrichta	89.78	0.00e+00	715.00
IUUC-Tni-120562	Tetraodon nigroviridis	67.15	1.00e-176	612.00
IUUC-Tca-121431	Theobroma cacao	38.43	5.00e-78	285.00
IUUC-Tre-122165	Trichoderma reesei	41.11	2.00e-69	256.00
IUUC-Tvi-122282	Trichoderma virens	40.85	3.00e-69	255.00
IUUC-Tae-125103	Triticum aestivum	37.38	3.00e-65	242.00
IUUC-Tur-126252	Triticum urartu	34.41	4.00e-56	212.00
IUUC-Tme-127183	Tuber melanosporum	38.34	9.00e-62	231.00
IUUC-Tbe-128052	Tupaia belangeri	77.40	3.00e-178	617.00
IUUC-Ttr-129310	Tursiops truncatus	85.60	0.00e+00	724.00
IUUC-Uma-129566	Ustilago maydis	33.71	3.00e-60	226.00
IUUC-Vda-129705	Verticillium dahliae	40.62	1.00e-68	254.00
IUUC-Vpa-130511	Vicugna pacos	82.36	0.00e+00	674.00
IUUC-Vvi-131241	Vitis vinifera	37.14	9.00e-63	234.00
IUUC-Xtr-132170	Xenopus tropicalis	67.99	0.00e+00	669.00
IUUC-Xma-133266	Xiphophorus maculatus	66.53	7.00e-178	616.00
IUUC-Yli-134585	Yarrowia lipolytica	35.91	1.00e-68	254.00
IUUC-Zma-135830	Zea mays	39.40	2.00e-71	263.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence