iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMUSG00000030323.13	ENSMUST00000112925.7	ENSMUSP00000108547.1
ENSMUSG00000030323.13	ENSMUST00000038234.12	ENSMUSP00000045468.6
ENSMUSG00000030323.13	ENSMUST00000141305.7	ENSMUSP00000138535.1
ENSMUSG00000030323.13	ENSMUST00000112923.6	ENSMUSP00000108545.2

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress	GXD
DNA & RNA Element
AREsite	microRNA	TRANSFAC	RepTar
RAID2
Protein-protein Interaction
HINT
Post-translational Modifications (PTMs)
CPLM	mUbiSiDa
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-15	58.1	51	80

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvW 28
           gH+d v+c+a+  d ++++sGs D++i +W
   Q: 51   GHKDTVYCVAYaKDgKRFASGSADKSIIIW 80
           8***********777*************** PP

Organism

Mus musculus

Protein Sequence
(Fasta)

MRAVLTWRDK AEQCIYDLAF KPDGTQLILA AGNRLLVYDT SDGTLLQPLK GHKDTVYCVA 60
YAKDGKRFAS GSADKSIIIW TSKLEGILKY THNDSIQCVS YNPVTHQLAS CSSSDFGLWS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTCCCTACGC GCCCGGCGCT TCGGCGGAGG AGGTGGGCTC CCTTTTGTAC ATGCGCACTT 60
GGAGCTTTGG GAAACTCATG CGCGGTTCAT TGCGCATGTG CGTTGCTAAG GGTAGCGCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001933	Ailuropoda melanoleuca	94.29	0.00e+00	2319.00
IUUC-Apl-003504	Anas platyrhynchos	84.78	0.00e+00	2111.00
IUUC-Aca-004767	Anolis carolinensis	85.17	0.00e+00	2147.00
IUUC-Ame-011642	Astyanax mexicanus	75.10	0.00e+00	1905.00
IUUC-Bta-012969	Bos taurus	91.86	0.00e+00	2254.00
IUUC-Cel-018670	Caenorhabditis elegans	38.38	0.00e+00	894.00
IUUC-Cja-019249	Callithrix jacchus	86.32	0.00e+00	2110.00
IUUC-Cfa-020915	Canis familiaris	94.45	0.00e+00	2282.00
IUUC-Cpo-021888	Cavia porcellus	85.31	0.00e+00	2161.00
IUUC-Cre-022789	Chlamydomonas reinhardtii	48.87	0.00e+00	1123.00
IUUC-Csa-023533	Chlorocebus sabaeus	90.89	0.00e+00	2248.00
IUUC-Cin-025121	Ciona intestinalis	58.06	0.00e+00	1503.00
IUUC-Csv-026240	Ciona savignyi	58.55	0.00e+00	1435.00
IUUC-Dno-029685	Dasypus novemcinctus	89.77	0.00e+00	2222.00
IUUC-Dme-032005	Drosophila melanogaster	26.18	2.00e-08	55.10
IUUC-Ete-032682	Echinops telfairi	83.96	0.00e+00	1667.00
IUUC-Eca-033831	Equus caballus	94.52	0.00e+00	2362.00
IUUC-Eeu-034919	Erinaceus europaeus	84.40	0.00e+00	1004.00
IUUC-Fca-036559	Felis catus	93.31	0.00e+00	2323.00
IUUC-Fal-037340	Ficedula albicollis	82.50	0.00e+00	2057.00
IUUC-Gga-040595	Gallus gallus	83.66	0.00e+00	2115.00
IUUC-Ggo-045356	Gorilla gorilla	87.60	0.00e+00	2228.00
IUUC-Hsa-046135	Homo sapiens	87.46	0.00e+00	2226.00
IUUC-Itr-048228	Ictidomys tridecemlineatus	81.67	0.00e+00	1957.00
IUUC-Lch-050183	Latimeria chalumnae	81.15	0.00e+00	1158.00
IUUC-Loc-052049	Lepisosteus oculatus	80.75	0.00e+00	2039.00
IUUC-Laf-053728	Loxodonta africana	93.32	0.00e+00	2329.00
IUUC-Mcc-054971	Macaca mulatta	88.15	0.00e+00	2234.00
IUUC-Meu-056446	Macropus eugenii	84.83	0.00e+00	2164.00
IUUC-Mga-059296	Meleagris gallopavo	80.43	0.00e+00	2082.00
IUUC-Mmr-061232	Microcebus murinus	89.95	0.00e+00	2241.00
IUUC-Mdo-062115	Monodelphis domestica	92.67	0.00e+00	2315.00
IUUC-Mpu-066136	Mustela putorius furo	90.43	0.00e+00	2243.00
IUUC-Mlu-068238	Myotis lucifugus	89.76	0.00e+00	2250.00
IUUC-Nle-069003	Nomascus leucogenys	87.37	0.00e+00	2140.00
IUUC-Ont-072080	Oreochromis niloticus	75.52	0.00e+00	1928.00
IUUC-Oan-072891	Ornithorhynchus anatinus	82.64	0.00e+00	910.00
IUUC-Ocu-074262	Oryctolagus cuniculus	90.82	0.00e+00	2238.00
IUUC-Ola-086538	Oryzias latipes	72.72	0.00e+00	1840.00
IUUC-Oga-088722	Otolemur garnettii	88.85	0.00e+00	2196.00
IUUC-Oar-089249	Ovis aries	88.56	0.00e+00	2196.00
IUUC-Ptr-090752	Pan troglodytes	90.61	0.00e+00	2064.00
IUUC-Pan-092472	Papio anubis	91.07	0.00e+00	2248.00
IUUC-Psi-093335	Pelodiscus sinensis	85.67	0.00e+00	2168.00
IUUC-Pma-094520	Petromyzon marinus	67.04	0.00e+00	1588.00
IUUC-Ppa-095600	Physcomitrella patens	62.83	6.00e-40	156.00
IUUC-Pfo-096526	Poecilia formosa	72.49	0.00e+00	1804.00
IUUC-Pab-098428	Pongo abelii	88.00	0.00e+00	1091.00
IUUC-Pca-100233	Procavia capensis	70.82	0.00e+00	961.00
IUUC-Pva-103064	Pteropus vampyrus	80.72	0.00e+00	1967.00
IUUC-Rno-105764	Rattus norvegicus	98.31	0.00e+00	2447.00
IUUC-Sha-106649	Sarcophilus harrisii	92.19	0.00e+00	2279.00
IUUC-Smo-109287	Selaginella moellendorffii	40.02	0.00e+00	873.00
IUUC-Tgu-116870	Taeniopygia guttata	83.10	0.00e+00	2028.00
IUUC-Tru-118661	Takifugu rubripes	70.79	0.00e+00	1794.00
IUUC-Tsy-119640	Tarsius syrichta	75.75	0.00e+00	655.00
IUUC-Tni-120812	Tetraodon nigroviridis	72.00	0.00e+00	1801.00
IUUC-Ttr-128862	Tursiops truncatus	89.71	0.00e+00	2298.00
IUUC-Vpa-130049	Vicugna pacos	78.01	6.00e-150	525.00
IUUC-Xtr-131914	Xenopus tropicalis	78.50	0.00e+00	1978.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence