• HOME
  • BROWSE
  • SEARCH
  • LINK
  • DOWNLOAD
  • USER GUIDE
  • Protein
  • Gene
  • Annotation
  • Classification
  • Domain Profile
  • Function
  • Protein Sequence
  • Nucleotide Sequence
  • Keyword
  • GO
  • Orthology
  • TOP

Basic Information Integrated Annotations

Tag Content
iUUCD ID IUUC-Hsa-046574
Ensembl Protein ID ENSP00000379026.2
UniProt Accession A0A087WSX6; A0A087WSX6_HUMAN
Genbank Protein ID ENSP00000379026
Protein Name CMT1A duplicated region transcript 1 protein
Genbank Nucleotide ID AC005324
Gene Name CDRT1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSG00000283295.1 ENST00000395667.6 ENSP00000379026.2
Annotation
Cancer Mutation
TCGACOSMICCGAPIntOGen
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOTCGAICGCHPM
DNA & RNA Element
UTRdbCircNetmicroRNARepTar
miRcodeRAID2
DNA Methylation
TCGAICGCCOSMIC
Protein Expression/Proteomics
THPAGPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 4.00e-28 97.9 493 530
UBD/Beta-Prp 2.70e-40 140.1 418 653
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclafsd.tllvsGsdDgtikvWDlrtgvllks 38
    gH++ +tc+++ + ++lvsG++D+++kvWD++tg++lk+
   Q: 493 GHQGTITCMDL-CkNRLVSGGRDCQVKVWDVDTGKCLKT 530
    8**********.4489********************986 PP
   


   UBD/Beta-Prp

   S: 16   vkfspdksllatgsrdgtikvwdvttgkll.rslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsg 106
    +++ +++l+a++s +++i + d+ + k++ ++ gh + v+a+ + +++++l++gs D i+ wdl++g c++++ gh+ +++++++++
   Q: 418 IHY-SGGDLIAVSS-NRKIHLLDIIQVKAIpVEFRGHAGSVRALFLCEEENFLLSGSYDLSIRYWDLKSGVCTRIFGGHQGTITCMDLCK-- 505
    455.6778888887.***********99962567********************************************************.. PP
   S: 107 dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsg 198
    ++lvsG++d ++vwd++tg+cl+ t+ h++ + +++++ ++vs++ + v++W +++++l++tl+g h+++v++l fd+ +l+sg
   Q: 506 NRLVSGGRDCQVKVWDVDTGKCLK-TF-RHKDPILATRIND--TYIVSSCERGLVKVWHIAMAQLVKTLSG-HEGAVKCLFFDQ--WHLLSG 590
    ***********************9.55.5777888889988..***************************9.************..8***** PP
   S: 199 sldgtvklwdlq..tgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlql 262
    s+dg v w++ ++c+++++ ++ + ++ r++s+ +Dg iri++ +g+++k+++
   Q: 591 STDGLVMAWSMVgkYERCLMAFKHPKEVLDVSLLF---LRVISACADGKIRIYNFFNGNCMKVIKA 653
    ***********988899999998777666655555...89**********************9976 PP
   

Organism Homo sapiens
Protein Sequence
(Fasta)
MENLESRLKN APYFRCEKGT DSIPLCRKCE TRVLAWKIFS TKEWFCRIND ISQRRFLVGI 60
LKQLNSLYLL HYFQNILQTT QGKDFIYNRS RIDLSKKEGK VVKSSLNQML DKTVEQKMKE 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Hsa-046574|E3,WD_repeat;UBD,Beta-Prp|Homo sapiens
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGGAAAACC TGGAATCAAG GCTCAAGAAT GCCCCCTATT TTCGTTGTGA GAAGGGAACC 60
GATTCCATCC CTCTATGCCG GAAGTGTGAG ACGCGTGTCT TAGCCTGGAA GATCTTCTCT 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Hsa-046574|E3,WD_repeat;UBD,Beta-Prp|Homo sapiens
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR001810--F-box_dom
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology
iUUCD ID Species Identity E-value Score
Created Date 25-Jun-2017

https://dev.news.makassarkota.go.id/public/pgsoft-demo/ https://jdih.sumbawabaratkab.go.id/lato/pg-soft-demo/ https://dev.news.makassarkota.go.id/public/slot-gacor/ http://pbb.tanahbumbukab.go.id/-/slot-gacor/ slot gacor https://siakad.unipra.ac.id/sass/slot-gacor-x500/ http://kpm.dinus.ac.id/assets/images/berita/slot/
Copyright © 2004-2017.The CUCKOO Workgroup. All Rights Reserved