iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

mRNA Expression
GEO
DNA & RNA Element
microRNA	miRNAMap	RAID2
Protein-protein Interaction
IID
Post-translational Modifications (PTMs)
dbPAF	PHOSIDA
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.60e-09	36.6	187	221

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgt.ikvWDlrtg 33
           H++ + cl+f ++ ++++++s  gt i+v+++  g
   Q: 187  HEGTIACLKFnQEgNMIATASTKGTvIRVYSVPNG 221
           9*********9778***********999**98766 PP

Organism

Caenorhabditis elegans

Protein Sequence
(Fasta)

MSATTSEENP DSINYIGFNQ DSKVICVGHK DGYMFYKTAD ILENNTLTYE GENLTHLGLN 60
NCLIIERLFS SALMVVISQK DPRVLHVYHF TSRNIICDHR FNKSVLTVRL NRDRIVVCLE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGGCTA CAACATCAGA AGAGAATCCC GACTCGATCA ACTACATAGG CTTCAATCAA 60
GACTCTAAGT AAGAGTTTTA TTTATCGATT TCCTTATTCC ATCTGTTCAT ATTTACAGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0045335--C:phagocytic vesicle
GO:0080025--F:phosphatidylinositol-3,5-bisphosphate binding
GO:0032266--F:phosphatidylinositol-3-phosphate binding
GO:0070273--F:phosphatidylinositol-4-phosphate binding
GO:0010314--F:phosphatidylinositol-5-phosphate binding
GO:0043277--P:apoptotic cell clearance
GO:0006914--P:autophagy
GO:0040024--P:dauer larval development
GO:0008340--P:determination of adult lifespan
GO:0009792--P:embryo development ending in birth or egg hatching
GO:0048598--P:embryonic morphogenesis
GO:0061365--P:positive regulation of triglyceride lipase activity
GO:0012501--P:programmed cell death
GO:0030163--P:protein catabolic process

KEGG

cel:CELE_F41E6.13

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001087	Aegilops tauschii	36.94	6.00e-25	107.00
IUUC-Aml-001842	Ailuropoda melanoleuca	43.75	3.00e-81	294.00
IUUC-Atr-002710	Amborella trichopoda	30.93	3.00e-30	124.00
IUUC-Apl-003390	Anas platyrhynchos	44.06	5.00e-81	293.00
IUUC-Aca-004975	Anolis carolinensis	42.55	2.00e-83	301.00
IUUC-Aly-006355	Arabidopsis lyrata	33.45	7.00e-29	120.00
IUUC-Ath-007423	Arabidopsis thaliana	33.82	5.00e-29	120.00
IUUC-Ago-007768	Ashbya gossypii	26.93	9.00e-26	109.00
IUUC-Acl-008148	Aspergillus clavatus	29.79	9.00e-43	166.00
IUUC-Afl-008562	Aspergillus flavus	31.00	8.00e-44	169.00
IUUC-Afu-008936	Aspergillus fumigatus	30.37	1.00e-43	169.00
IUUC-Ani-009254	Aspergillus nidulans	30.41	8.00e-44	169.00
IUUC-Ang-009798	Aspergillus niger	31.32	4.00e-44	170.00
IUUC-Aor-010066	Aspergillus oryzae	31.00	8.00e-44	169.00
IUUC-Ate-010266	Aspergillus terreus	32.56	1.00e-46	179.00
IUUC-Ame-010727	Astyanax mexicanus	42.28	3.00e-83	300.00
IUUC-Bta-012655	Bos taurus	42.29	3.00e-84	303.00
IUUC-Bci-013627	Botrytis cinerea	30.41	1.00e-44	172.00
IUUC-Bdi-014719	Brachypodium distachyon	29.68	3.00e-29	121.00
IUUC-Bol-015404	Brassica oleracea	28.37	2.00e-25	108.00
IUUC-Bra-017319	Brassica rapa	28.02	2.00e-25	108.00
IUUC-Cja-018829	Callithrix jacchus	39.19	2.00e-74	271.00
IUUC-Cfa-020858	Canis familiaris	43.66	2.00e-81	294.00
IUUC-Cpo-022235	Cavia porcellus	40.65	8.00e-81	292.00
IUUC-Cre-022613	Chlamydomonas reinhardtii	27.22	3.00e-30	124.00
IUUC-Csa-023963	Chlorocebus sabaeus	39.31	5.00e-77	280.00
IUUC-Cho-024328	Choloepus hoffmanni	46.69	4.00e-78	283.00
IUUC-Cin-025343	Ciona intestinalis	39.87	6.00e-74	270.00
IUUC-Csv-025920	Ciona savignyi	43.84	1.00e-82	298.00
IUUC-Cgl-026425	Colletotrichum gloeosporioides	34.84	3.00e-18	84.30
IUUC-Cne-026947	Cryptococcus neoformans	30.18	4.00e-42	164.00
IUUC-Dre-027490	Danio rerio	41.73	8.00e-82	296.00
IUUC-Dno-030057	Dasypus novemcinctus	42.47	3.00e-83	300.00
IUUC-Dor-030472	Dipodomys ordii	43.87	2.00e-72	264.00
IUUC-Dse-031215	Dothistroma septosporum	28.67	3.00e-41	160.00
IUUC-Dme-031881	Drosophila melanogaster	26.89	8.00e-22	96.30
IUUC-Ete-032276	Echinops telfairi	43.91	8.00e-74	269.00
IUUC-Eca-034362	Equus caballus	42.11	8.00e-82	296.00
IUUC-Eeu-034479	Erinaceus europaeus	35.76	2.00e-20	90.90
IUUC-Fca-036230	Felis catus	44.57	6.00e-82	296.00
IUUC-Fal-036782	Ficedula albicollis	43.80	1.00e-80	292.00
IUUC-Fox-037797	Fusarium oxysporum	35.04	1.00e-39	155.00
IUUC-Fso-038174	Fusarium solani	34.43	3.00e-38	151.00
IUUC-Gmo-039706	Gadus morhua	41.71	3.00e-75	274.00
IUUC-Ggr-040113	Gaeumannomyces graminis	35.40	2.00e-38	152.00
IUUC-Gga-040690	Gallus gallus	43.94	1.00e-83	301.00
IUUC-Gac-041360	Gasterosteus aculeatus	43.22	9.00e-83	299.00
IUUC-Gma-043922	Glycine max	28.31	1.00e-24	106.00
IUUC-Ggo-045610	Gorilla gorilla	26.95	5.00e-30	124.00
IUUC-Hsa-046782	Homo sapiens	42.74	1.00e-76	279.00
IUUC-Hvu-047374	Hordeum vulgare	28.43	2.00e-28	119.00
IUUC-Itr-048693	Ictidomys tridecemlineatus	38.59	1.00e-77	281.00
IUUC-Kpa-049378	Komagataella pastoris	33.88	3.00e-46	178.00
IUUC-Lch-050413	Latimeria chalumnae	46.56	4.00e-77	280.00
IUUC-Lpe-051251	Leersia perrieri	28.57	1.00e-27	116.00
IUUC-Loc-052269	Lepisosteus oculatus	27.93	6.00e-31	126.00
IUUC-Lma-052948	Leptosphaeria maculans	29.53	1.00e-42	166.00
IUUC-Laf-054007	Loxodonta africana	42.55	2.00e-84	305.00
IUUC-Mcc-055829	Macaca mulatta	27.50	9.00e-32	129.00
IUUC-Meu-056020	Macropus eugenii	37.09	2.00e-22	97.80
IUUC-Mor-057125	Magnaporthe oryzae	35.40	4.00e-40	157.00
IUUC-Mpo-057416	Magnaporthe poae	29.39	2.00e-25	108.00
IUUC-Mtr-058536	Medicago truncatula	30.03	7.00e-32	130.00
IUUC-Mla-058885	Melampsora laricipopulina	32.31	5.00e-13	66.60
IUUC-Mga-059795	Meleagris gallopavo	44.06	9.00e-81	292.00
IUUC-Mvi-060219	Microbotryum violaceum	30.91	5.00e-38	150.00
IUUC-Mmr-061096	Microcebus murinus	43.47	9.00e-81	292.00
IUUC-Mdo-062881	Monodelphis domestica	43.09	4.00e-86	310.00
IUUC-Mmu-063787	Mus musculus	40.54	3.00e-85	307.00
IUUC-Mac-064838	Musa acuminata	28.61	2.00e-32	132.00
IUUC-Mpu-066019	Mustela putorius furo	42.21	2.00e-76	278.00
IUUC-Mlu-068016	Myotis lucifugus	42.55	2.00e-84	305.00
IUUC-Nfi-068424	Neosartorya fischeri	30.88	1.00e-44	172.00
IUUC-Ncr-068833	Neurospora crassa	30.65	5.00e-41	160.00
IUUC-Nle-069047	Nomascus leucogenys	30.47	4.00e-30	123.00
IUUC-Opr-070933	Ochotona princeps	44.62	6.00e-60	223.00
IUUC-Ont-072495	Oreochromis niloticus	43.79	9.00e-84	302.00
IUUC-Oan-073084	Ornithorhynchus anatinus	41.89	7.00e-80	289.00
IUUC-Ocu-074689	Oryctolagus cuniculus	40.45	7.00e-80	289.00
IUUC-Oba-075529	Oryza barthii	33.96	2.00e-26	113.00
IUUC-Obr-076316	Oryza brachyantha	31.37	7.00e-27	112.00
IUUC-Ogl-077403	Oryza glaberrima	30.26	8.00e-28	116.00
IUUC-Ogu-078223	Oryza glumaepatula	30.50	8.00e-28	116.00
IUUC-Oin-079580	Oryza indica	30.26	8.00e-28	116.00
IUUC-Olo-080794	Oryza longistaminata	28.50	7.00e-24	103.00
IUUC-Ome-081736	Oryza meridionalis	31.37	2.00e-26	113.00
IUUC-Oni-082413	Oryza nivara	30.50	8.00e-28	116.00
IUUC-Opu-083356	Oryza punctata	29.46	1.00e-27	116.00
IUUC-Oru-084972	Oryza rufipogon	30.26	8.00e-28	116.00
IUUC-Osa-085644	Oryza sativa	30.26	8.00e-28	116.00
IUUC-Ola-086343	Oryzias latipes	29.33	2.00e-31	128.00
IUUC-Olu-087808	Ostreococcus lucimarinus	30.22	8.00e-29	119.00
IUUC-Oga-088894	Otolemur garnettii	39.95	2.00e-77	281.00
IUUC-Oar-089850	Ovis aries	43.50	2.00e-81	295.00
IUUC-Ptr-090456	Pan troglodytes	39.31	4.00e-77	280.00
IUUC-Pan-092249	Papio anubis	40.66	7.00e-80	289.00
IUUC-Psi-094095	Pelodiscus sinensis	44.09	4.00e-81	293.00
IUUC-Pma-094403	Petromyzon marinus	31.85	2.00e-28	118.00
IUUC-Pno-095015	Phaeosphaeria nodorum	28.77	3.00e-37	147.00
IUUC-Ppa-095480	Physcomitrella patens	34.38	7.00e-28	117.00
IUUC-Pfo-096987	Poecilia formosa	42.74	7.00e-83	299.00
IUUC-Pab-097754	Pongo abelii	41.71	9.00e-77	279.00
IUUC-Pop-099760	Populus trichocarpa	28.13	2.00e-31	128.00
IUUC-Pca-100176	Procavia capensis	29.07	2.00e-21	95.10
IUUC-Ppe-101799	Prunus persica	30.96	5.00e-27	114.00
IUUC-Pva-103047	Pteropus vampyrus	44.61	7.00e-81	293.00
IUUC-Pgr-103496	Puccinia graminis	31.00	1.00e-08	53.90
IUUC-Ptt-103915	Puccinia triticina	24.65	1.00e-12	66.60
IUUC-Pte-104139	Pyrenophora teres	29.70	2.00e-40	158.00
IUUC-Pyt-104488	Pyrenophora triticirepentis	29.70	3.00e-40	157.00
IUUC-Rno-105990	Rattus norvegicus	41.87	5.00e-85	306.00
IUUC-Sce-106327	Saccharomyces cerevisiae	27.01	2.00e-20	92.80
IUUC-Sha-106581	Sarcophilus harrisii	44.35	4.00e-81	293.00
IUUC-Sja-107913	Schizosaccharomyces japonicus	29.66	5.00e-44	170.00
IUUC-Spo-108068	Schizosaccharomyces pombe	32.13	8.00e-39	152.00
IUUC-Ssl-108418	Sclerotinia sclerotiorum	31.00	1.00e-46	179.00
IUUC-Smo-108755	Selaginella moellendorffii	28.84	7.00e-33	133.00
IUUC-Sit-110655	Setaria italica	29.79	7.00e-29	120.00
IUUC-Sly-110866	Solanum lycopersicum	30.58	6.00e-32	130.00
IUUC-Stu-112534	Solanum tuberosum	28.61	2.00e-29	122.00
IUUC-Sar-113276	Sorex araneus	37.09	4.00e-22	96.70
IUUC-Sbi-114057	Sorghum bicolor	28.65	3.00e-27	114.00
IUUC-Sre-115219	Sporisorium reilianum	27.61	1.00e-38	153.00
IUUC-Ssc-116360	Sus scrofa	42.82	6.00e-85	306.00
IUUC-Tgu-116951	Taeniopygia guttata	44.06	5.00e-81	293.00
IUUC-Tru-117889	Takifugu rubripes	42.49	6.00e-81	293.00
IUUC-Tsy-119533	Tarsius syrichta	29.41	7.00e-18	82.40
IUUC-Tni-119984	Tetraodon nigroviridis	29.05	5.00e-32	130.00
IUUC-Tca-121406	Theobroma cacao	30.14	1.00e-30	125.00
IUUC-Tre-121895	Trichoderma reesei	36.13	3.00e-43	168.00
IUUC-Tvi-122311	Trichoderma virens	35.04	8.00e-43	166.00
IUUC-Tae-123067	Triticum aestivum	28.32	4.00e-28	118.00
IUUC-Tur-126757	Triticum urartu	27.93	3.00e-29	121.00
IUUC-Ttr-128940	Tursiops truncatus	35.84	7.00e-26	109.00
IUUC-Uma-129438	Ustilago maydis	34.05	5.00e-29	120.00
IUUC-Vda-129782	Verticillium dahliae	36.11	6.00e-27	113.00
IUUC-Vvi-131293	Vitis vinifera	29.84	7.00e-29	120.00
IUUC-Xtr-131754	Xenopus tropicalis	28.57	3.00e-26	111.00
IUUC-Xma-133370	Xiphophorus maculatus	42.74	7.00e-83	299.00
IUUC-Yli-134337	Yarrowia lipolytica	33.00	1.00e-41	162.00
IUUC-Zma-135090	Zea mays	31.09	3.00e-27	115.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence