iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000009781.8	ENSRNOT00000067729.4	ENSRNOP00000060919.3
ENSRNOG00000009781.8	ENSRNOT00000047243.4	ENSRNOP00000042414.2
ENSRNOG00000009781.8	ENSRNOT00000013400.6	ENSRNOP00000013400.4

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
microRNA	TRANSFAC	RAID2
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.00e-14	53.5	474	516

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf......sd..tllvsGsdDgtikvWDlrtgvl 35
           gH++++t+++        d  +l+v++s D t+k+W ++ +++
   Q: 474  GHQGPITGIHChaavgaVDfsHLFVTSSFDWTVKLWTTKNNKP 516
           8********999999**4444899************8776665 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MSDKSELKAE LERKKQRLAQ IREEKKRKEE ERKKKETDQK KEAAVSVQEE SDLEKKRREA 60
EALLQSMGLT TDSPIVFSEH WVPPPMSPSS KSVSTPSEAG SQDSGDGAVG SRTLHWDTDP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGCGTACTCC GCCCCAGGAT GTGAGGTGTA GTTGTCCAGC TTTTGCCAAA GCGGAAACGC 60
TTCGGATCCC GCGGCCGGTG TGTCTCTATT TCACCGGTCA GATTCTGTTT TGCAAAAGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR025956--DYNC1I1/DYNC1I2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50294--WD_REPEATS_REGION

Pfam

PF11540--Dynein_IC2
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005813--C:centrosome
GO:0005868--C:cytoplasmic dynein complex
GO:0005874--C:microtubule
GO:0031982--C:vesicle
GO:0007018--P:microtubule-based movement

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002108	Ailuropoda melanoleuca	97.65	0.00e+00	1142.00
IUUC-Apl-003265	Anas platyrhynchos	89.64	0.00e+00	1038.00
IUUC-Aca-004911	Anolis carolinensis	89.50	0.00e+00	999.00
IUUC-Acl-008245	Aspergillus clavatus	39.45	5.00e-91	328.00
IUUC-Afl-008509	Aspergillus flavus	39.83	4.00e-92	332.00
IUUC-Afu-009032	Aspergillus fumigatus	35.77	1.00e-90	327.00
IUUC-Ani-009498	Aspergillus nidulans	39.62	1.00e-93	337.00
IUUC-Ang-009680	Aspergillus niger	37.87	2.00e-92	333.00
IUUC-Aor-010087	Aspergillus oryzae	39.83	4.00e-92	332.00
IUUC-Ate-010443	Aspergillus terreus	39.28	6.00e-93	335.00
IUUC-Ame-011786	Astyanax mexicanus	81.97	0.00e+00	993.00
IUUC-Bta-013350	Bos taurus	91.38	0.00e+00	1048.00
IUUC-Bci-013835	Botrytis cinerea	40.09	5.00e-100	358.00
IUUC-Cel-018207	Caenorhabditis elegans	43.55	2.00e-104	372.00
IUUC-Cja-019943	Callithrix jacchus	94.86	0.00e+00	1144.00
IUUC-Cfa-020325	Canis familiaris	94.04	0.00e+00	1070.00
IUUC-Cpo-022271	Cavia porcellus	97.90	0.00e+00	1134.00
IUUC-Csa-023526	Chlorocebus sabaeus	95.21	0.00e+00	1108.00
IUUC-Cho-025091	Choloepus hoffmanni	79.14	0.00e+00	707.00
IUUC-Cin-025487	Ciona intestinalis	56.21	2.00e-173	602.00
IUUC-Cne-026971	Cryptococcus neoformans	46.58	5.00e-117	415.00
IUUC-Dre-028011	Danio rerio	81.97	0.00e+00	976.00
IUUC-Dno-029574	Dasypus novemcinctus	96.08	0.00e+00	1112.00
IUUC-Dor-030788	Dipodomys ordii	88.40	0.00e+00	941.00
IUUC-Dse-031518	Dothistroma septosporum	37.39	2.00e-88	320.00
IUUC-Dme-032157	Drosophila melanogaster	63.33	2.00e-170	592.00
IUUC-Ete-032732	Echinops telfairi	97.89	0.00e+00	734.00
IUUC-Eca-033654	Equus caballus	97.90	0.00e+00	1140.00
IUUC-Eeu-035271	Erinaceus europaeus	91.24	0.00e+00	1013.00
IUUC-Fca-035962	Felis catus	97.50	0.00e+00	1141.00
IUUC-Fal-037591	Ficedula albicollis	93.10	0.00e+00	1045.00
IUUC-Fox-037992	Fusarium oxysporum	40.17	1.00e-99	357.00
IUUC-Fso-038209	Fusarium solani	38.23	1.00e-94	340.00
IUUC-Gmo-039036	Gadus morhua	67.79	0.00e+00	795.00
IUUC-Gga-040996	Gallus gallus	92.79	0.00e+00	1048.00
IUUC-Gac-041771	Gasterosteus aculeatus	82.97	0.00e+00	1021.00
IUUC-Ggo-044656	Gorilla gorilla	97.65	0.00e+00	1149.00
IUUC-Hsa-046136	Homo sapiens	97.65	0.00e+00	1149.00
IUUC-Itr-048711	Ictidomys tridecemlineatus	97.49	0.00e+00	1146.00
IUUC-Lch-050416	Latimeria chalumnae	87.06	0.00e+00	1003.00
IUUC-Loc-051856	Lepisosteus oculatus	82.71	0.00e+00	914.00
IUUC-Lma-052957	Leptosphaeria maculans	33.69	8.00e-73	268.00
IUUC-Laf-054418	Loxodonta africana	97.81	0.00e+00	1144.00
IUUC-Mcc-055539	Macaca mulatta	95.08	0.00e+00	1127.00
IUUC-Meu-056899	Macropus eugenii	90.61	0.00e+00	1068.00
IUUC-Mor-056924	Magnaporthe oryzae	38.86	2.00e-100	360.00
IUUC-Mpo-057521	Magnaporthe poae	37.74	2.00e-82	300.00
IUUC-Mla-058954	Melampsora laricipopulina	43.04	2.00e-106	379.00
IUUC-Mga-060055	Meleagris gallopavo	91.49	0.00e+00	1038.00
IUUC-Mvi-060541	Microbotryum violaceum	43.45	2.00e-112	400.00
IUUC-Mmr-061254	Microcebus murinus	94.78	0.00e+00	1123.00
IUUC-Mdo-061887	Monodelphis domestica	99.53	0.00e+00	871.00
IUUC-Mmu-064021	Mus musculus	99.06	0.00e+00	1161.00
IUUC-Mpu-065831	Mustela putorius furo	97.81	0.00e+00	1137.00
IUUC-Mlu-066987	Myotis lucifugus	93.14	0.00e+00	1086.00
IUUC-Nfi-068441	Neosartorya fischeri	35.88	3.00e-90	326.00
IUUC-Ncr-068656	Neurospora crassa	39.38	1.00e-102	367.00
IUUC-Nle-069113	Nomascus leucogenys	96.24	0.00e+00	1118.00
IUUC-Opr-070488	Ochotona princeps	85.22	0.00e+00	900.00
IUUC-Ont-071319	Oreochromis niloticus	78.32	0.00e+00	945.00
IUUC-Oan-073420	Ornithorhynchus anatinus	93.42	0.00e+00	1060.00
IUUC-Ocu-074046	Oryctolagus cuniculus	89.97	0.00e+00	1041.00
IUUC-Ola-086484	Oryzias latipes	78.25	0.00e+00	987.00
IUUC-Oga-088759	Otolemur garnettii	94.98	0.00e+00	1092.00
IUUC-Oar-090204	Ovis aries	96.08	0.00e+00	1120.00
IUUC-Ptr-091193	Pan troglodytes	97.65	0.00e+00	1149.00
IUUC-Pan-092842	Papio anubis	97.65	0.00e+00	1149.00
IUUC-Psi-092969	Pelodiscus sinensis	91.49	0.00e+00	1082.00
IUUC-Pma-094729	Petromyzon marinus	72.26	0.00e+00	875.00
IUUC-Pno-095122	Phaeosphaeria nodorum	38.61	2.00e-92	333.00
IUUC-Pfo-097067	Poecilia formosa	77.99	0.00e+00	877.00
IUUC-Pab-098223	Pongo abelii	97.65	0.00e+00	1149.00
IUUC-Pva-102326	Pteropus vampyrus	94.67	0.00e+00	1093.00
IUUC-Pgr-103384	Puccinia graminis	42.15	7.00e-109	388.00
IUUC-Ptt-103792	Puccinia triticina	43.01	2.00e-109	389.00
IUUC-Pte-104046	Pyrenophora teres	37.50	1.00e-88	321.00
IUUC-Pyt-104796	Pyrenophora triticirepentis	38.08	2.00e-85	310.00
IUUC-Sha-107044	Sarcophilus harrisii	92.16	0.00e+00	1017.00
IUUC-Spo-108374	Schizosaccharomyces pombe	31.13	2.00e-49	190.00
IUUC-Ssl-108411	Sclerotinia sclerotiorum	39.71	2.00e-93	337.00
IUUC-Sar-113334	Sorex araneus	87.60	0.00e+00	998.00
IUUC-Sre-114966	Sporisorium reilianum	42.89	1.00e-96	347.00
IUUC-Ssc-116396	Sus scrofa	94.04	0.00e+00	1070.00
IUUC-Tgu-116477	Taeniopygia guttata	93.26	0.00e+00	1043.00
IUUC-Tru-117872	Takifugu rubripes	80.12	0.00e+00	971.00
IUUC-Tsy-118912	Tarsius syrichta	97.02	0.00e+00	1129.00
IUUC-Tni-120754	Tetraodon nigroviridis	78.88	0.00e+00	949.00
IUUC-Tre-122022	Trichoderma reesei	42.79	6.00e-101	361.00
IUUC-Tvi-122391	Trichoderma virens	42.20	2.00e-100	359.00
IUUC-Tme-126997	Tuber melanosporum	39.69	2.00e-99	356.00
IUUC-Tbe-127693	Tupaia belangeri	84.01	1.00e-168	586.00
IUUC-Ttr-128834	Tursiops truncatus	96.74	0.00e+00	1081.00
IUUC-Uma-129615	Ustilago maydis	40.25	3.00e-102	365.00
IUUC-Vda-129769	Verticillium dahliae	34.68	5.00e-25	107.00
IUUC-Vpa-130062	Vicugna pacos	96.87	0.00e+00	1141.00
IUUC-Xtr-132003	Xenopus tropicalis	81.45	0.00e+00	993.00
IUUC-Xma-133021	Xiphophorus maculatus	79.36	0.00e+00	921.00
IUUC-Yli-134587	Yarrowia lipolytica	36.21	1.00e-71	264.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence