iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000000480.7	ENSRNOT00000092247.1	ENSRNOP00000075915.1
ENSRNOG00000000480.7	ENSRNOT00000059548.3	ENSRNOP00000056303.3

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
microRNA	TRANSFAC
Protein-protein Interaction
IID
Post-translational Modifications (PTMs)
dbPAF	PhosphositePlus
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	7.30e-10	39.3	89	140

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedek.slveCekCrewfHpaClklsveeelpnsek.wiCpkCr 52
            C vC++++      lv CekCr+++H++C+ + +  + +++   w C++C 
   Q: 89   LCCVCRSETVVPGnRLVSCEKCRHAYHQDCHVPRAPAPGEGEGSsWVCRQCV 140
           588***999876459*******************55444444447******7 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MAQLPRLSRL GAPSLWDPAS PAPTSGPRPR LWEGQDVLAR WTDGLLYLGT IKKVDSAREV 60
CLVQFEDDSQ FLVLWKDISP AALPGEELLC CVCRSETVVP GNRLVSCEKC RHAYHQDCHV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGGCTAGCT GCCAAGAAGG TTATTTCCTG CTGCCCTCAG AGCAAGCCTC CTATCCGAAA 60
AGGGGGCTAC AGGGATTTCC TCGTCCTCCC CGACCGGCCG CGCCTCCAAT AGCGCAGCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR025894--Mtf2_C_dom
IPR031202--PHF1
IPR002999--Tudor
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF14061--Mtf2_C
PF00628--PHD

SMART

SM00249--PHD
SM00333--TUDOR

Gene Ontology

GO:0005634--C:nucleus
GO:0003682--F:chromatin binding
GO:0008270--F:zinc ion binding
GO:0006974--P:cellular response to DNA damage stimulus
GO:0031060--P:regulation of histone methylation

KEGG

rno:294287

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001720	Ailuropoda melanoleuca	93.47	0.00e+00	919.00
IUUC-Ame-011369	Astyanax mexicanus	47.45	7.00e-128	450.00
IUUC-Bta-012536	Bos taurus	92.42	0.00e+00	884.00
IUUC-Cja-019049	Callithrix jacchus	92.95	0.00e+00	895.00
IUUC-Cfa-021211	Canis familiaris	92.95	0.00e+00	915.00
IUUC-Cpo-021980	Cavia porcellus	91.39	0.00e+00	905.00
IUUC-Csa-023154	Chlorocebus sabaeus	92.42	0.00e+00	919.00
IUUC-Dre-028597	Danio rerio	50.74	3.00e-138	484.00
IUUC-Dor-030431	Dipodomys ordii	91.90	0.00e+00	875.00
IUUC-Ete-032589	Echinops telfairi	87.78	0.00e+00	900.00
IUUC-Eca-034315	Equus caballus	93.30	0.00e+00	942.00
IUUC-Gmo-039382	Gadus morhua	65.00	5.00e-120	423.00
IUUC-Gac-041748	Gasterosteus aculeatus	65.83	2.00e-122	431.00
IUUC-Ggo-044966	Gorilla gorilla	93.12	0.00e+00	899.00
IUUC-Hsa-046188	Homo sapiens	93.12	0.00e+00	868.00
IUUC-Itr-048249	Ictidomys tridecemlineatus	94.65	0.00e+00	926.00
IUUC-Lch-050336	Latimeria chalumnae	53.50	4.00e-150	524.00
IUUC-Laf-053729	Loxodonta africana	88.99	0.00e+00	859.00
IUUC-Mcc-055486	Macaca mulatta	92.42	0.00e+00	919.00
IUUC-Meu-055933	Macropus eugenii	92.92	0.00e+00	671.00
IUUC-Mmr-061114	Microcebus murinus	92.25	0.00e+00	926.00
IUUC-Mdo-062033	Monodelphis domestica	90.74	0.00e+00	658.00
IUUC-Mmu-063482	Mus musculus	96.96	0.00e+00	989.00
IUUC-Mpu-065725	Mustela putorius furo	92.77	0.00e+00	929.00
IUUC-Mlu-067243	Myotis lucifugus	90.30	0.00e+00	903.00
IUUC-Nle-069759	Nomascus leucogenys	92.95	0.00e+00	897.00
IUUC-Ont-071655	Oreochromis niloticus	54.17	6.00e-126	444.00
IUUC-Ocu-073930	Oryctolagus cuniculus	93.12	0.00e+00	902.00
IUUC-Oga-088161	Otolemur garnettii	90.65	0.00e+00	902.00
IUUC-Oar-089582	Ovis aries	92.08	0.00e+00	879.00
IUUC-Ptr-090810	Pan troglodytes	92.95	0.00e+00	919.00
IUUC-Pan-091980	Papio anubis	92.42	0.00e+00	919.00
IUUC-Pfo-097260	Poecilia formosa	61.02	1.00e-123	436.00
IUUC-Pab-098556	Pongo abelii	92.77	0.00e+00	894.00
IUUC-Pca-100360	Procavia capensis	93.74	0.00e+00	806.00
IUUC-Pva-102900	Pteropus vampyrus	91.70	0.00e+00	891.00
IUUC-Sha-107357	Sarcophilus harrisii	81.09	0.00e+00	828.00
IUUC-Ssc-116070	Sus scrofa	91.36	0.00e+00	863.00
IUUC-Tsy-119247	Tarsius syrichta	98.10	0.00e+00	632.00
IUUC-Tbe-127780	Tupaia belangeri	86.77	0.00e+00	833.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence