iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Mcc-055193

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

JSUE03029228

Gene Name

LRWD1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMMUG00000012021.3	ENSMMUT00000016837.3	ENSMMUP00000015768.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.10e-07	31.6	391	421

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWD 29
           H+  +  l+f   ++t+l ++s+D+ i +WD
   Q: 391  HKKAIATLCFspaHETHLFTASYDKRIILWD 421
           888899999*98666**************** PP

Organism

Macaca mulatta

Protein Sequence
(Fasta)

MGPLSARLLM QRGRPKSDRL GKIRSLDLSG LELLSEHLDP KLLCRLTQLQ ELDLSNNQLE 60
TLPDNLGLSH LRVLRCANNQ LGDVTALCQF PKLEELSLEG NPFLTVNDNL KVSFLLPTLR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTATCGCGG ACGCCAGTAC CGGGCTCCAG GAGACGCAGG GGGACGCCAG ACGCCGGGGC 60
CGCCGACTGG GTCGGCGCGG GCCGCGCCTC CTCGCCATGG GCCCCCTCTC GGCGCGGCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0433--Leucine-rich repeat
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR032675--L_dom-like
IPR001611--Leu-rich_rpt
IPR025875--Leu-rich_rpt_4
IPR003591--Leu-rich_rpt_typical-subtyp
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS51450--LRR
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12799--LRR_4

SMART

SM00369--LRR_TYP
SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0000776--C:kinetochore
GO:0005664--C:nuclear origin of replication recognition complex
GO:0005730--C:nucleolus
GO:0005654--C:nucleoplasm
GO:0005721--C:pericentric heterochromatin
GO:0031933--C:telomeric heterochromatin
GO:0003682--F:chromatin binding
GO:0008327--F:methyl-CpG binding
GO:0006325--P:chromatin organization
GO:0071169--P:establishment of protein localization to chromatin

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001948	Ailuropoda melanoleuca	85.68	0.00e+00	682.00
IUUC-Bta-012858	Bos taurus	80.43	0.00e+00	1007.00
IUUC-Cja-019702	Callithrix jacchus	96.91	0.00e+00	1181.00
IUUC-Cfa-020910	Canis familiaris	88.15	0.00e+00	1080.00
IUUC-Cpo-022523	Cavia porcellus	83.28	0.00e+00	1082.00
IUUC-Csa-023359	Chlorocebus sabaeus	98.76	0.00e+00	1238.00
IUUC-Dno-029426	Dasypus novemcinctus	87.83	0.00e+00	1066.00
IUUC-Dor-030654	Dipodomys ordii	81.52	0.00e+00	830.00
IUUC-Eca-034035	Equus caballus	89.32	0.00e+00	1096.00
IUUC-Eeu-034711	Erinaceus europaeus	77.86	5.00e-173	600.00
IUUC-Gmo-039096	Gadus morhua	34.31	6.00e-100	358.00
IUUC-Ggo-044714	Gorilla gorilla	97.53	0.00e+00	1194.00
IUUC-Hsa-046826	Homo sapiens	97.53	0.00e+00	1193.00
IUUC-Laf-054449	Loxodonta africana	86.90	0.00e+00	1061.00
IUUC-Mmr-061572	Microcebus murinus	89.94	0.00e+00	1131.00
IUUC-Mmu-063240	Mus musculus	77.81	0.00e+00	953.00
IUUC-Mpu-066295	Mustela putorius furo	88.14	0.00e+00	1081.00
IUUC-Mlu-067766	Myotis lucifugus	87.69	0.00e+00	1097.00
IUUC-Nle-069200	Nomascus leucogenys	94.75	0.00e+00	1112.00
IUUC-Ola-086965	Oryzias latipes	38.13	3.00e-85	310.00
IUUC-Oga-088411	Otolemur garnettii	82.17	0.00e+00	1078.00
IUUC-Oar-089415	Ovis aries	81.36	0.00e+00	953.00
IUUC-Ptr-090663	Pan troglodytes	97.68	0.00e+00	1194.00
IUUC-Pan-092467	Papio anubis	97.53	0.00e+00	1174.00
IUUC-Pab-098479	Pongo abelii	97.53	0.00e+00	1196.00
IUUC-Pca-101023	Procavia capensis	75.85	0.00e+00	887.00
IUUC-Pva-102812	Pteropus vampyrus	84.67	0.00e+00	1063.00
IUUC-Rno-105469	Rattus norvegicus	78.52	0.00e+00	978.00
IUUC-Ssc-115884	Sus scrofa	87.83	0.00e+00	1093.00
IUUC-Tbe-127247	Tupaia belangeri	89.97	6.00e-140	491.00
IUUC-Ttr-128723	Tursiops truncatus	87.00	0.00e+00	1077.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence