iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.8__2491__AT5G64630.2	fgenesh2_kg.8__2491__AT5G64630.2	fgenesh2_kg.8__2491__AT5G64630.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.10e-18	66.3	111	146

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrtgvl 35
           H  +v +l++  +d +l+sGs D+++ +WD+++g++
   Q: 111  HRKDVLDLQWslDDAYLISGSVDNSCIIWDVSKGTV 146
           8889*******7779****************99876 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MKGGTIQISW HDGKPVLTLD FHPISGLLAT AGADYDIKLW LINSGQAEKK VPSVSYQSSL 60
TYHGCAVNTI RFSPSGELLA SGADGGELFI WKLHPSETNQ SWKVHKSLSF HRKDVLDLQW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTTAGTTCT TCTTCTTCCC ACTAATCCCA CAAACCCTAG AAATTTTCTC GAGAAAATCC 60
GAATCACGAT TCTGGGCATT GTGGAGGATT GACAAAAATG AAGGGAGGTA CGATACAGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0033186--C:CAF-1 complex
GO:0008283--P:cell proliferation
GO:0000724--P:double-strand break repair via homologous recombination
GO:0031507--P:heterochromatin assembly
GO:0048366--P:leaf development
GO:0009933--P:meristem structural organization
GO:0006334--P:nucleosome assembly
GO:0009555--P:pollen development
GO:0010026--P:trichome differentiation

KEGG

aly:ARALYDRAFT_496675

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000474	Aegilops tauschii	56.63	2.00e-161	561.00
IUUC-Aml-001755	Ailuropoda melanoleuca	39.69	9.00e-84	303.00
IUUC-Atr-002674	Amborella trichopoda	60.04	1.00e-167	582.00
IUUC-Apl-003701	Anas platyrhynchos	39.41	2.00e-86	312.00
IUUC-Aca-004692	Anolis carolinensis	42.12	1.00e-89	323.00
IUUC-Ath-007683	Arabidopsis thaliana	95.50	0.00e+00	974.00
IUUC-Ago-007940	Ashbya gossypii	37.56	3.00e-67	248.00
IUUC-Acl-008070	Aspergillus clavatus	39.69	2.00e-36	146.00
IUUC-Afl-008414	Aspergillus flavus	40.72	2.00e-37	150.00
IUUC-Ani-009399	Aspergillus nidulans	38.66	1.00e-35	144.00
IUUC-Ang-009650	Aspergillus niger	38.05	4.00e-34	139.00
IUUC-Aor-009937	Aspergillus oryzae	40.72	2.00e-37	150.00
IUUC-Ame-011094	Astyanax mexicanus	41.24	1.00e-92	333.00
IUUC-Bta-013423	Bos taurus	39.42	1.00e-84	306.00
IUUC-Bdi-014860	Brachypodium distachyon	68.17	6.00e-153	533.00
IUUC-Bol-016603	Brassica oleracea	87.73	0.00e+00	899.00
IUUC-Bra-017175	Brassica rapa	87.76	0.00e+00	858.00
IUUC-Cel-018272	Caenorhabditis elegans	31.37	6.00e-42	164.00
IUUC-Cja-019558	Callithrix jacchus	39.17	2.00e-84	306.00
IUUC-Cfa-020900	Canis familiaris	39.16	3.00e-82	298.00
IUUC-Cpo-022054	Cavia porcellus	40.00	1.00e-73	270.00
IUUC-Csa-023850	Chlorocebus sabaeus	39.16	2.00e-85	308.00
IUUC-Cho-024510	Choloepus hoffmanni	33.55	9.00e-40	157.00
IUUC-Cin-025178	Ciona intestinalis	40.20	1.00e-79	289.00
IUUC-Cme-027136	Cyanidioschyzon merolae	33.18	1.00e-58	220.00
IUUC-Dre-027879	Danio rerio	37.92	8.00e-88	317.00
IUUC-Dno-029335	Dasypus novemcinctus	39.91	7.00e-86	310.00
IUUC-Dor-030520	Dipodomys ordii	31.15	1.00e-52	200.00
IUUC-Dse-031566	Dothistroma septosporum	41.00	1.00e-34	140.00
IUUC-Dme-031838	Drosophila melanogaster	38.56	2.00e-79	289.00
IUUC-Eca-033563	Equus caballus	40.14	5.00e-86	311.00
IUUC-Fca-036052	Felis catus	41.69	2.00e-84	305.00
IUUC-Fal-037080	Ficedula albicollis	42.43	1.00e-88	320.00
IUUC-Fox-038022	Fusarium oxysporum	40.51	7.00e-35	141.00
IUUC-Fso-038115	Fusarium solani	38.34	2.00e-33	136.00
IUUC-Gmo-039461	Gadus morhua	45.30	4.00e-69	254.00
IUUC-Gga-041133	Gallus gallus	42.16	1.00e-87	316.00
IUUC-Gac-041769	Gasterosteus aculeatus	42.18	2.00e-89	322.00
IUUC-Gma-043339	Glycine max	69.57	1.00e-173	602.00
IUUC-Ggo-044561	Gorilla gorilla	39.38	8.00e-87	313.00
IUUC-Hsa-046150	Homo sapiens	39.38	6.00e-86	310.00
IUUC-Hvu-047792	Hordeum vulgare	65.57	5.00e-107	379.00
IUUC-Itr-048630	Ictidomys tridecemlineatus	41.49	7.00e-86	310.00
IUUC-Kpa-049397	Komagataella pastoris	37.40	2.00e-72	265.00
IUUC-Lch-050365	Latimeria chalumnae	34.33	7.00e-58	217.00
IUUC-Lpe-050875	Leersia perrieri	54.28	1.00e-159	555.00
IUUC-Loc-052770	Lepisosteus oculatus	42.04	2.00e-89	322.00
IUUC-Lma-053291	Leptosphaeria maculans	37.24	1.00e-34	140.00
IUUC-Laf-053505	Loxodonta africana	40.65	4.00e-85	308.00
IUUC-Mcc-054803	Macaca mulatta	39.16	2.00e-85	308.00
IUUC-Meu-056578	Macropus eugenii	40.72	3.00e-37	149.00
IUUC-Mtr-058066	Medicago truncatula	70.74	1.00e-168	585.00
IUUC-Mga-059735	Meleagris gallopavo	40.32	1.00e-88	320.00
IUUC-Mmr-061343	Microcebus murinus	40.05	3.00e-85	308.00
IUUC-Mdo-062065	Monodelphis domestica	40.90	4.00e-85	308.00
IUUC-Mmu-063501	Mus musculus	40.18	4.00e-85	308.00
IUUC-Mac-064864	Musa acuminata	64.68	1.00e-174	605.00
IUUC-Mpu-066549	Mustela putorius furo	41.56	9.00e-86	310.00
IUUC-Mlu-067121	Myotis lucifugus	38.85	8.00e-87	313.00
IUUC-Nfi-068462	Neosartorya fischeri	39.18	3.00e-36	145.00
IUUC-Ncr-068838	Neurospora crassa	37.06	4.00e-32	132.00
IUUC-Nle-069854	Nomascus leucogenys	39.38	9.00e-86	310.00
IUUC-Opr-070803	Ochotona princeps	36.12	4.00e-74	271.00
IUUC-Ont-071642	Oreochromis niloticus	42.43	7.00e-90	324.00
IUUC-Oan-073675	Ornithorhynchus anatinus	41.94	6.00e-88	317.00
IUUC-Ocu-073863	Oryctolagus cuniculus	40.91	1.00e-82	299.00
IUUC-Oba-075682	Oryza barthii	52.02	3.00e-149	521.00
IUUC-Obr-076039	Oryza brachyantha	54.94	2.00e-157	548.00
IUUC-Ogu-078021	Oryza glumaepatula	54.55	1.00e-155	542.00
IUUC-Oin-079908	Oryza indica	46.48	8.00e-124	436.00
IUUC-Olo-081063	Oryza longistaminata	53.37	1.00e-155	541.00
IUUC-Ome-081930	Oryza meridionalis	53.56	5.00e-156	543.00
IUUC-Oni-082547	Oryza nivara	54.02	7.00e-155	539.00
IUUC-Opu-084089	Oryza punctata	66.31	7.00e-154	537.00
IUUC-Oru-084844	Oryza rufipogon	54.55	1.00e-155	542.00
IUUC-Osa-085582	Oryza sativa	54.55	1.00e-155	542.00
IUUC-Ola-087187	Oryzias latipes	42.43	1.00e-90	326.00
IUUC-Olu-087792	Ostreococcus lucimarinus	39.44	1.00e-77	282.00
IUUC-Oga-088390	Otolemur garnettii	40.10	1.00e-84	306.00
IUUC-Oar-089740	Ovis aries	38.78	3.00e-79	288.00
IUUC-Ptr-091581	Pan troglodytes	39.38	6.00e-86	310.00
IUUC-Pan-092258	Papio anubis	35.51	3.00e-72	265.00
IUUC-Psi-093761	Pelodiscus sinensis	35.84	2.00e-89	322.00
IUUC-Ppa-095428	Physcomitrella patens	54.43	5.00e-128	451.00
IUUC-Pfo-097357	Poecilia formosa	42.18	5.00e-90	324.00
IUUC-Pab-098520	Pongo abelii	39.38	1.00e-85	309.00
IUUC-Pop-099331	Populus trichocarpa	67.48	0.00e+00	668.00
IUUC-Ppe-101548	Prunus persica	58.89	0.00e+00	650.00
IUUC-Pva-103243	Pteropus vampyrus	40.67	6.00e-76	277.00
IUUC-Pte-104247	Pyrenophora teres	38.58	2.00e-35	143.00
IUUC-Pyt-104641	Pyrenophora triticirepentis	38.58	2.00e-35	143.00
IUUC-Rno-105202	Rattus norvegicus	40.00	1.00e-84	306.00
IUUC-Sce-106250	Saccharomyces cerevisiae	36.02	6.00e-68	250.00
IUUC-Sha-107036	Sarcophilus harrisii	40.47	2.00e-86	312.00
IUUC-Sja-107912	Schizosaccharomyces japonicus	33.69	2.00e-69	256.00
IUUC-Spo-108050	Schizosaccharomyces pombe	31.59	9.00e-60	223.00
IUUC-Ssl-108607	Sclerotinia sclerotiorum	37.76	1.00e-33	137.00
IUUC-Sit-109838	Setaria italica	55.58	8.00e-161	559.00
IUUC-Sly-110872	Solanum lycopersicum	62.17	2.00e-175	608.00
IUUC-Stu-111933	Solanum tuberosum	62.22	2.00e-174	604.00
IUUC-Sbi-114587	Sorghum bicolor	55.77	3.00e-161	560.00
IUUC-Ssc-115462	Sus scrofa	40.00	5.00e-86	311.00
IUUC-Tgu-117186	Taeniopygia guttata	42.43	2.00e-88	319.00
IUUC-Tru-118310	Takifugu rubripes	40.47	9.00e-88	317.00
IUUC-Tsy-118927	Tarsius syrichta	36.53	6.00e-50	191.00
IUUC-Tni-120832	Tetraodon nigroviridis	41.77	3.00e-88	318.00
IUUC-Tca-121584	Theobroma cacao	67.89	0.00e+00	684.00
IUUC-Tre-122140	Trichoderma reesei	39.49	5.00e-34	138.00
IUUC-Tvi-122663	Trichoderma virens	40.00	1.00e-34	140.00
IUUC-Tae-124502	Triticum aestivum	56.44	8.00e-161	559.00
IUUC-Tur-126239	Triticum urartu	56.44	1.00e-161	562.00
IUUC-Tme-127108	Tuber melanosporum	34.83	5.00e-64	238.00
IUUC-Ttr-129010	Tursiops truncatus	41.85	2.00e-85	308.00
IUUC-Vda-129825	Verticillium dahliae	36.60	6.00e-32	131.00
IUUC-Vpa-130374	Vicugna pacos	37.65	1.00e-25	110.00
IUUC-Vvi-131136	Vitis vinifera	73.82	0.00e+00	639.00
IUUC-Xtr-132141	Xenopus tropicalis	37.25	2.00e-86	312.00
IUUC-Xma-133980	Xiphophorus maculatus	42.93	9.00e-91	327.00
IUUC-Yli-134457	Yarrowia lipolytica	35.65	8.00e-30	124.00
IUUC-Zma-135321	Zea mays	54.63	1.00e-155	541.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence