iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111599

Ensembl Protein ID

Solyc07g061720.2.1

UniProt Accession

A4GVL8; A4GVL8_SOLLC

Genbank Protein ID

ABO27635.1

Protein Name

Gibberellin 2-oxidase

Genbank Nucleotide ID

EF441354

Gene Name

SlGA2ox4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc07g061720.2	Solyc07g061720.2.1	Solyc07g061720.2.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/ZnF/UBZ	37.04	7.40e-02	35.00	IUUC-Rno-105535

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MVVLTKPAIT HFPIVKNSFK SPSYINDIPV IDLSKANSKN LIVNACEEFG FFKVINHDVP 60
MEFISKLESE AVKFFSSPLS EKLKAGPADP FGYGNKKIGQ NGDIGWVEYI LLSTNSEFNY 120

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Nucleotide Sequence
(Fasta)

TCATCACTAC ACAGCTAAGT TCCTACAGTT ATAATAACAA ACAACAATTT CTACCAAAGT 60
TTTTCAAATT CTAAATTTCA TCAAAAAAAC AACAACAATG GTGGTCTTAA CAAAACCTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0408--Iron
KW-0479--Metal-binding
KW-0560--Oxidoreductase
KW-1185--Reference proteome

Interpro

IPR026992--DIOX_N
IPR027443--IPNS-like
IPR005123--Oxoglu/Fe-dep_dioxygenase

PROSITE

PS51471--FE2OG_OXY

Pfam

PF03171--2OG-FeII_Oxy
PF14226--DIOX_N

Gene Ontology

GO:0052634--F:C-19 gibberellin 2-beta-dioxygenase activity
GO:0046872--F:metal ion binding
GO:0045487--P:gibberellin catabolic process
GO:0009416--P:response to light stimulus

KEGG

sly:100134889

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Eca-034005	Equus caballus	27.40	4.00e-01	29.30
IUUC-Ppa-096011	Physcomitrella patens	29.64	7.00e-29	120.00
IUUC-Rno-105535	Rattus norvegicus	37.04	9.00e-03	35.00
IUUC-Spo-108139	Schizosaccharomyces pombe	27.15	1.00e-17	83.20
IUUC-Stu-112660	Solanum tuberosum	92.06	5.00e-137	479.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence