iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.4__1166__AT2G31830.1	fgenesh2_kg.4__1166__AT2G31830.1	fgenesh2_kg.4__1166__AT2G31830.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.40e-08	34.2	270	300

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclafsd.tllvsGsdDgtikvWDlr 31
           H ++v+ +  s+ + ++s+sd g+ik+W l+
   Q: 270  HRGPVNYIVISSyGDMWSCSDGGVIKIWTLD 300
           9999999977555789************875 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MDSVIIEADE REALASLVPA HPLPPRKTHS YVEQYEQKPH HPIRKYSLDE GSRSVTSDSE 60
AVYFDSSDGE FSTEGVVIIN GRTSGERGNG EEYGFVTPPS KPASQHGEND GGGEDDIESL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCATTTCCT CTTCATGGTT GGTTTCGTTC CGATTTCCAA ATTTCTTCAT TTGGCAAATA 60
CTTTTGATCT TCTTCCATGG ATTCGGTAAT TATTGAAGCA GATGAGCGGG AGGCGTTGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0255--Endonuclease
KW-0269--Exonuclease
KW-0378--Hydrolase
KW-0540--Nuclease
KW-1185--Reference proteome

Interpro

IPR005135--Endo/exonuclease/phosphatase
IPR013783--Ig-like_fold
IPR000300--IPPc
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat

Pfam

PF03372--Exo_endo_phos

SMART

SM00128--IPPc
SM00320--WD40

Gene Ontology

GO:0004519--F:endonuclease activity
GO:0004527--F:exonuclease activity
GO:0046856--P:phosphatidylinositol dephosphorylation

KEGG

aly:ARALYDRAFT_482106

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aca-005378	Anolis carolinensis	24.69	1.00e-27	118.00
IUUC-Ath-006638	Arabidopsis thaliana	96.55	0.00e+00	2134.00
IUUC-Bol-015139	Brassica oleracea	86.68	0.00e+00	1900.00
IUUC-Bra-017809	Brassica rapa	86.64	0.00e+00	1894.00
IUUC-Csv-026341	Ciona savignyi	31.29	3.00e-11	61.60
IUUC-Fal-037608	Ficedula albicollis	25.40	2.00e-27	117.00
IUUC-Mmu-063296	Mus musculus	25.12	4.00e-28	120.00
IUUC-Pca-101115	Procavia capensis	23.64	1.00e-07	51.60
IUUC-Rno-105658	Rattus norvegicus	25.12	2.00e-28	120.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence