iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
microRNA	RAID2
Protein-protein Interaction
IID
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-25	88.6	81	117

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           H++ vtcl+f  s ++l+sG+ Dg i vWD ++  +lk
   Q: 81   HSGTVTCLKFygS-RHLISGAEDGLICVWDAKKWECLK 117
           9*********854.9***************77766665 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MELVAGSYEQ VLFGFTVHRG PAKSGHRETW TPVADFTHHA HTASLSAVAA NNRYVVTGSK 60
DETIHIYDMK KKVEHGALVH HSGTVTCLKF YGSRHLISGA EDGLICVWDA KKWECLKSIK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGCGGCTTCA TTCCTCCAGC TTGTCGTAGA AGGGCCACGT GACATTCGAG AGCGTACTCC 60
GTTATTGCCA TCTGCAGGCG CCTAAAAGGT GCCCCCTGAT GGATGACGTA TAATTTGCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0008283--P:cell proliferation
GO:0060021--P:palate development

KEGG

rno:361232

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001803	Ailuropoda melanoleuca	77.57	2.00e-167	581.00
IUUC-Atr-003018	Amborella trichopoda	32.81	6.00e-44	171.00
IUUC-Apl-004199	Anas platyrhynchos	73.05	7.00e-125	440.00
IUUC-Aca-005157	Anolis carolinensis	68.81	8.00e-116	409.00
IUUC-Aly-006245	Arabidopsis lyrata	32.81	6.00e-36	144.00
IUUC-Ath-007309	Arabidopsis thaliana	33.12	4.00e-37	148.00
IUUC-Ago-007878	Ashbya gossypii	30.16	3.00e-31	129.00
IUUC-Acl-008015	Aspergillus clavatus	22.55	9.00e-17	81.60
IUUC-Afu-008760	Aspergillus fumigatus	23.92	3.00e-18	86.70
IUUC-Ani-009358	Aspergillus nidulans	21.94	5.00e-15	75.90
IUUC-Ate-010411	Aspergillus terreus	22.27	6.00e-15	75.50
IUUC-Ame-011121	Astyanax mexicanus	55.20	4.00e-105	374.00
IUUC-Bgr-012152	Blumeria graminis	24.27	1.00e-14	73.90
IUUC-Bta-012383	Bos taurus	73.68	2.00e-162	565.00
IUUC-Bdi-014505	Brachypodium distachyon	28.57	1.00e-16	80.50
IUUC-Bol-015458	Brassica oleracea	33.23	6.00e-39	154.00
IUUC-Bra-017790	Brassica rapa	33.54	6.00e-39	154.00
IUUC-Cja-018803	Callithrix jacchus	72.94	3.00e-144	504.00
IUUC-Cfa-020178	Canis familiaris	76.63	7.00e-164	570.00
IUUC-Cpo-021785	Cavia porcellus	74.35	4.00e-161	560.00
IUUC-Cre-022703	Chlamydomonas reinhardtii	31.80	6.00e-35	142.00
IUUC-Csa-023179	Chlorocebus sabaeus	75.89	4.00e-163	567.00
IUUC-Cho-025088	Choloepus hoffmanni	74.83	2.00e-124	438.00
IUUC-Cin-025484	Ciona intestinalis	32.11	6.00e-20	90.50
IUUC-Csv-025887	Ciona savignyi	35.63	5.00e-48	184.00
IUUC-Cgl-026525	Colletotrichum gloeosporioides	27.44	1.00e-14	74.70
IUUC-Cne-027021	Cryptococcus neoformans	35.36	6.00e-26	113.00
IUUC-Dre-027360	Danio rerio	63.38	2.00e-112	399.00
IUUC-Dno-029836	Dasypus novemcinctus	77.46	2.00e-160	557.00
IUUC-Dor-030677	Dipodomys ordii	86.43	2.00e-144	504.00
IUUC-Dse-031177	Dothistroma septosporum	23.27	1.00e-17	84.70
IUUC-Dme-032004	Drosophila melanogaster	29.90	5.00e-29	122.00
IUUC-Ete-032837	Echinops telfairi	83.93	6.00e-140	489.00
IUUC-Eca-033291	Equus caballus	77.43	4.00e-171	593.00
IUUC-Eeu-035347	Erinaceus europaeus	83.81	6.00e-138	483.00
IUUC-Fca-036577	Felis catus	76.23	8.00e-159	553.00
IUUC-Fal-036810	Ficedula albicollis	64.81	9.00e-122	429.00
IUUC-Fox-037844	Fusarium oxysporum	29.86	2.00e-16	80.10
IUUC-Fso-038338	Fusarium solani	25.60	6.00e-19	88.60
IUUC-Gmo-038537	Gadus morhua	68.61	9.00e-107	379.00
IUUC-Gga-040566	Gallus gallus	61.93	5.00e-131	460.00
IUUC-Gac-042422	Gasterosteus aculeatus	61.83	1.00e-118	419.00
IUUC-Gma-044199	Glycine max	31.43	5.00e-33	134.00
IUUC-Ggo-045365	Gorilla gorilla	64.52	2.00e-131	462.00
IUUC-Hsa-046121	Homo sapiens	76.99	2.00e-165	574.00
IUUC-Itr-048361	Ictidomys tridecemlineatus	79.29	4.00e-157	547.00
IUUC-Kpa-049407	Komagataella pastoris	33.88	6.00e-39	154.00
IUUC-Lch-049767	Latimeria chalumnae	68.32	7.00e-124	436.00
IUUC-Lpe-051569	Leersia perrieri	29.28	6.00e-19	88.20
IUUC-Loc-051940	Lepisosteus oculatus	56.16	1.00e-110	392.00
IUUC-Lma-053288	Leptosphaeria maculans	24.59	7.00e-19	88.60
IUUC-Laf-054463	Loxodonta africana	76.23	2.00e-164	571.00
IUUC-Mcc-055412	Macaca mulatta	76.16	2.00e-163	568.00
IUUC-Mor-056986	Magnaporthe oryzae	25.34	1.00e-12	67.80
IUUC-Mpo-057401	Magnaporthe poae	27.56	7.00e-13	68.60
IUUC-Mtr-057886	Medicago truncatula	31.71	1.00e-30	126.00
IUUC-Mla-058862	Melampsora laricipopulina	23.95	5.00e-17	82.40
IUUC-Mga-060109	Meleagris gallopavo	64.20	7.00e-124	436.00
IUUC-Mvi-060326	Microbotryum violaceum	26.18	2.00e-26	113.00
IUUC-Mmr-060681	Microcebus murinus	77.38	5.00e-163	566.00
IUUC-Mdo-063004	Monodelphis domestica	71.35	1.00e-152	532.00
IUUC-Mmu-064184	Mus musculus	83.51	0.00e+00	662.00
IUUC-Mac-064987	Musa acuminata	31.75	3.00e-35	142.00
IUUC-Mpu-065847	Mustela putorius furo	75.00	2.00e-170	592.00
IUUC-Mlu-067608	Myotis lucifugus	77.89	4.00e-173	600.00
IUUC-Nfi-068531	Neosartorya fischeri	23.69	8.00e-19	88.60
IUUC-Nle-069302	Nomascus leucogenys	77.26	4.00e-166	577.00
IUUC-Ont-072591	Oreochromis niloticus	65.89	1.00e-102	366.00
IUUC-Oan-073558	Ornithorhynchus anatinus	66.45	4.00e-115	407.00
IUUC-Ocu-074558	Oryctolagus cuniculus	76.57	3.00e-150	524.00
IUUC-Ogl-076960	Oryza glaberrima	27.90	2.00e-22	99.80
IUUC-Ogu-078660	Oryza glumaepatula	27.67	2.00e-19	90.10
IUUC-Oin-079790	Oryza indica	27.76	1.00e-25	110.00
IUUC-Ome-081631	Oryza meridionalis	25.95	5.00e-13	68.60
IUUC-Oni-083082	Oryza nivara	27.76	7.00e-22	97.80
IUUC-Opu-083394	Oryza punctata	28.71	7.00e-27	114.00
IUUC-Oru-084461	Oryza rufipogon	27.73	4.00e-21	95.10
IUUC-Osa-085655	Oryza sativa	28.22	7.00e-20	90.50
IUUC-Ola-086955	Oryzias latipes	64.85	3.00e-120	424.00
IUUC-Olu-087657	Ostreococcus lucimarinus	30.18	8.00e-25	108.00
IUUC-Oga-088108	Otolemur garnettii	77.05	1.00e-162	565.00
IUUC-Oar-090019	Ovis aries	73.95	7.00e-163	566.00
IUUC-Ptr-091544	Pan troglodytes	76.99	1.00e-165	575.00
IUUC-Pan-092562	Papio anubis	76.16	4.00e-163	567.00
IUUC-Psi-094025	Pelodiscus sinensis	64.69	2.00e-103	369.00
IUUC-Pma-094322	Petromyzon marinus	57.66	5.00e-95	340.00
IUUC-Ppa-095541	Physcomitrella patens	33.75	6.00e-38	151.00
IUUC-Pfo-096667	Poecilia formosa	63.08	4.00e-100	357.00
IUUC-Pab-098064	Pongo abelii	76.44	9.00e-164	569.00
IUUC-Pop-099969	Populus trichocarpa	32.47	3.00e-37	148.00
IUUC-Pca-101053	Procavia capensis	81.62	1.00e-158	552.00
IUUC-Ppe-101839	Prunus persica	33.97	2.00e-41	162.00
IUUC-Pva-102963	Pteropus vampyrus	76.47	1.00e-157	548.00
IUUC-Pgr-103276	Puccinia graminis	25.81	5.00e-14	72.40
IUUC-Pte-104117	Pyrenophora teres	25.55	1.00e-17	84.70
IUUC-Pyt-104649	Pyrenophora triticirepentis	24.61	2.00e-16	80.50
IUUC-Sce-106226	Saccharomyces cerevisiae	26.29	3.00e-28	119.00
IUUC-Sha-106907	Sarcophilus harrisii	68.31	2.00e-155	541.00
IUUC-Sja-107867	Schizosaccharomyces japonicus	25.73	2.00e-21	96.70
IUUC-Spo-108377	Schizosaccharomyces pombe	27.86	8.00e-23	100.00
IUUC-Ssl-108647	Sclerotinia sclerotiorum	22.93	2.00e-15	77.00
IUUC-Smo-109068	Selaginella moellendorffii	30.97	3.00e-34	139.00
IUUC-Sit-110114	Setaria italica	28.71	1.00e-21	96.70
IUUC-Sly-111581	Solanum lycopersicum	35.03	1.00e-37	150.00
IUUC-Stu-112770	Solanum tuberosum	34.82	1.00e-37	150.00
IUUC-Sbi-114797	Sorghum bicolor	29.63	3.00e-16	79.30
IUUC-Sre-114941	Sporisorium reilianum	28.61	6.00e-33	135.00
IUUC-Ssc-116346	Sus scrofa	75.54	5.00e-155	540.00
IUUC-Tgu-116628	Taeniopygia guttata	63.24	5.00e-129	454.00
IUUC-Tru-117646	Takifugu rubripes	64.69	1.00e-107	382.00
IUUC-Tsy-119593	Tarsius syrichta	58.91	2.00e-122	432.00
IUUC-Tni-119872	Tetraodon nigroviridis	63.91	7.00e-114	403.00
IUUC-Tca-121500	Theobroma cacao	33.76	3.00e-39	155.00
IUUC-Tre-122151	Trichoderma reesei	24.77	2.00e-18	87.40
IUUC-Tvi-122619	Trichoderma virens	24.35	9.00e-16	78.20
IUUC-Tae-125015	Triticum aestivum	28.89	9.00e-23	100.00
IUUC-Tbe-127959	Tupaia belangeri	82.76	1.00e-139	488.00
IUUC-Ttr-129125	Tursiops truncatus	75.07	1.00e-161	562.00
IUUC-Uma-129567	Ustilago maydis	27.06	2.00e-32	133.00
IUUC-Vpa-130157	Vicugna pacos	88.48	8.00e-85	306.00
IUUC-Vvi-131065	Vitis vinifera	33.55	2.00e-34	139.00
IUUC-Xtr-132601	Xenopus tropicalis	57.39	1.00e-106	379.00
IUUC-Xma-133142	Xiphophorus maculatus	65.35	2.00e-101	362.00
IUUC-Yli-134580	Yarrowia lipolytica	30.75	1.00e-33	137.00
IUUC-Zma-135330	Zea mays	31.25	9.00e-28	117.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence