iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-050070

Ensembl Protein ID

ENSLACP00000019394.1

UniProt Accession

H3BBX3; H3BBX3_LATCH

Genbank Protein ID

ENSLACP00000019394

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01013970

Gene Name

PACSIN1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000017058.1	ENSLACT00000019529.1	ENSLACP00000019394.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/SH3	5.50e-16	58.5	435	490

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/SH3

   S: 5    kvqvlydyeaqnddeLtlkkGdvvlviekeeqdegWlkgvkelegkrGlfPenFvekl 62
           +v++lydy++q++deL++k+Gd ++ + ++e ++gW+kg + ++g+ Gl P+n+ve +
   Q: 435  RVRALYDYDGQEQDELSFKAGDELTKL-EDEDEQGWCKG-RLDNGQLGLYPANYVEAI 490
           699************************.9**********.59*************975 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

MSGAYDESAN MEETTDSFWE IGNYKRTVKR IDDGHRLCND LMNCVHERAK IEKSYAQQLT 60
DWSKRWKQLI EKGPQYGTLE KAWMGIMTEA DKVSELHQEV KNGLMSEDFE KVKNWQKDAY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGGGGG CATACGATGA GTCTGCCAAC ATGGAGGAAA CAACAGACAG TTTTTGGGAA 60
GTAAGTTTCA TTTCTTTATA GTGTCTGGCA TTAAAAGCAG CACAAATGAA CTGCCTGTAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0728--SH3 domain

Interpro

IPR027267--AH/BAR-dom
IPR031160--F_BAR
IPR001060--FCH_dom
IPR028518--PACSIN1
IPR001452--SH3_domain

PROSITE

PS51741--F_BAR
PS50002--SH3

Pfam

PF00611--FCH
PF00018--SH3_1

PRINTS

PR00452--SH3DOMAIN

SMART

SM00055--FCH
SM00326--SH3

Gene Ontology

GO:0007015--P:actin filament organization
GO:0048666--P:neuron development
GO:0097320--P:plasma membrane tubulation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001861	Ailuropoda melanoleuca	72.73	0.00e+00	644.00
IUUC-Apl-003667	Anas platyrhynchos	74.00	0.00e+00	667.00
IUUC-Aca-005229	Anolis carolinensis	74.13	0.00e+00	707.00
IUUC-Ame-011410	Astyanax mexicanus	68.43	0.00e+00	631.00
IUUC-Bta-013509	Bos taurus	71.69	3.00e-178	617.00
IUUC-Cel-018168	Caenorhabditis elegans	32.47	3.00e-50	192.00
IUUC-Cja-019659	Callithrix jacchus	72.71	0.00e+00	664.00
IUUC-Cfa-020396	Canis familiaris	72.71	0.00e+00	639.00
IUUC-Cpo-022376	Cavia porcellus	73.12	0.00e+00	642.00
IUUC-Csa-023701	Chlorocebus sabaeus	72.51	0.00e+00	639.00
IUUC-Cin-025707	Ciona intestinalis	41.91	5.00e-105	374.00
IUUC-Csv-026244	Ciona savignyi	39.55	5.00e-50	190.00
IUUC-Dre-027456	Danio rerio	68.28	0.00e+00	671.00
IUUC-Dno-029429	Dasypus novemcinctus	63.76	9.00e-167	580.00
IUUC-Dor-030122	Dipodomys ordii	64.08	2.00e-171	595.00
IUUC-Dme-032120	Drosophila melanogaster	45.62	6.00e-80	291.00
IUUC-Eca-033367	Equus caballus	65.10	2.00e-173	601.00
IUUC-Eeu-034821	Erinaceus europaeus	50.61	2.00e-126	445.00
IUUC-Fca-036314	Felis catus	72.71	0.00e+00	640.00
IUUC-Fal-037300	Ficedula albicollis	76.37	0.00e+00	712.00
IUUC-Gmo-038571	Gadus morhua	63.16	8.00e-163	566.00
IUUC-Gga-040626	Gallus gallus	71.08	2.00e-176	611.00
IUUC-Gac-041445	Gasterosteus aculeatus	66.73	4.00e-174	603.00
IUUC-Ggo-045557	Gorilla gorilla	72.10	0.00e+00	634.00
IUUC-Hsa-045778	Homo sapiens	72.10	0.00e+00	634.00
IUUC-Itr-048856	Ictidomys tridecemlineatus	73.73	0.00e+00	646.00
IUUC-Loc-051764	Lepisosteus oculatus	75.97	0.00e+00	721.00
IUUC-Laf-054465	Loxodonta africana	72.15	0.00e+00	649.00
IUUC-Mcc-055324	Macaca mulatta	72.30	0.00e+00	639.00
IUUC-Meu-056348	Macropus eugenii	73.73	0.00e+00	657.00
IUUC-Mga-059285	Meleagris gallopavo	71.34	2.00e-173	602.00
IUUC-Mmr-061367	Microcebus murinus	72.10	4.00e-171	593.00
IUUC-Mdo-062600	Monodelphis domestica	47.43	3.00e-131	461.00
IUUC-Mmu-064347	Mus musculus	72.45	0.00e+00	679.00
IUUC-Mpu-066864	Mustela putorius furo	72.71	0.00e+00	639.00
IUUC-Mlu-067826	Myotis lucifugus	66.12	4.00e-180	624.00
IUUC-Nle-070027	Nomascus leucogenys	72.19	4.00e-176	610.00
IUUC-Opr-071050	Ochotona princeps	46.41	1.00e-126	446.00
IUUC-Ont-072188	Oreochromis niloticus	69.51	0.00e+00	670.00
IUUC-Oan-073256	Ornithorhynchus anatinus	53.29	2.00e-108	385.00
IUUC-Ocu-074297	Oryctolagus cuniculus	72.30	3.00e-179	620.00
IUUC-Ola-087188	Oryzias latipes	66.06	2.00e-160	558.00
IUUC-Oga-088856	Otolemur garnettii	72.51	0.00e+00	628.00
IUUC-Oar-089806	Ovis aries	65.31	4.00e-170	590.00
IUUC-Ptr-091111	Pan troglodytes	64.49	3.00e-165	574.00
IUUC-Pan-092056	Papio anubis	72.51	0.00e+00	639.00
IUUC-Psi-093704	Pelodiscus sinensis	66.18	3.00e-176	611.00
IUUC-Pfo-097281	Poecilia formosa	65.99	3.00e-179	620.00
IUUC-Pab-098202	Pongo abelii	72.30	0.00e+00	636.00
IUUC-Pca-100881	Procavia capensis	71.89	0.00e+00	631.00
IUUC-Pva-102181	Pteropus vampyrus	72.51	0.00e+00	637.00
IUUC-Rno-105295	Rattus norvegicus	70.61	0.00e+00	641.00
IUUC-Sha-106641	Sarcophilus harrisii	68.22	0.00e+00	634.00
IUUC-Sar-113461	Sorex araneus	60.73	8.00e-158	550.00
IUUC-Ssc-115685	Sus scrofa	72.51	0.00e+00	637.00
IUUC-Tgu-116876	Taeniopygia guttata	67.23	1.00e-175	609.00
IUUC-Tru-118248	Takifugu rubripes	63.75	1.00e-154	538.00
IUUC-Tsy-118901	Tarsius syrichta	58.11	2.00e-104	372.00
IUUC-Tni-120717	Tetraodon nigroviridis	63.88	2.00e-159	555.00
IUUC-Ttr-129069	Tursiops truncatus	71.91	1.00e-175	608.00
IUUC-Vpa-130760	Vicugna pacos	57.22	3.00e-63	235.00
IUUC-Xtr-132925	Xenopus tropicalis	66.40	0.00e+00	630.00
IUUC-Xma-134280	Xiphophorus maculatus	67.21	0.00e+00	638.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence