iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Sce-106408

Ensembl Protein ID

YLR007W

UniProt Accession

Q07913; D6VY09; NSE1_YEAST

Genbank Protein ID

CAA97529.1; DAA09325.1

Protein Name

Non-structural maintenance of chromosomes element 1

Genbank Nucleotide ID

Z73179; BK006945

Gene Name

NSE1; YLR007W

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
YLR007W	YLR007W	YLR007W

Annotation

mRNA Expression
GEO	FFGED
Protein-protein Interaction
IID	iRefIndex	HINT	Mentha
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	25.54	3.00e-07	53.50	IUUC-Hsa-046194

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Saccharomyces cerevisiae

Functional Description
(View)

Acts in a DNA repair pathway for removal of UV-induced DNA damage that is distinct from classical nucleotide excision repair and in repair of ionizing radiation damage. Functions in homologous recombination repair of DNA double strand breaks and in recovery of stalled replication forks.

Protein Sequence
(Fasta)

MEVHEEQVSA PVTGDATAKY LLQYILSARG ICHENALILA LMRLETDAST LNTEWSIQQW 60
VDKLNDYINA INVKLNLLGY KIIRINHGIG RNAVTLKAKQ NFESFEDNTA IRAHNNDYAV 120

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Nucleotide Sequence
(Fasta)

ATGGAGGTAC ATGAAGAGCA GGTCTCTGCA CCTGTAACAG GGGATGCTAC AGCAAAATAT 60
CTGCTGCAAT ATATCTTGTC AGCAAGAGGC ATTTGCCATG AAAATGCTCT CATTCTAGCC 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0227--DNA damage
KW-0233--DNA recombination
KW-0234--DNA repair
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR011513--Nse1
IPR014857--Znf_RING-like

Pfam

PF07574--SMC_Nse1
PF08746--zf-RING-like

Gene Ontology

GO:0005634--C:nucleus
GO:0030915--C:Smc5-Smc6 complex
GO:0046872--F:metal ion binding
GO:0004842--F:ubiquitin-protein transferase activity
GO:0006281--P:DNA repair
GO:0000724--P:double-strand break repair via homologous recombination
GO:0006301--P:postreplication repair
GO:0016925--P:protein sumoylation
GO:0016567--P:protein ubiquitination

KEGG

sce:YLR007W

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000235	Aegilops tauschii	21.32	5.00e-05	39.70
IUUC-Aml-002226	Ailuropoda melanoleuca	24.32	1.00e-08	51.60
IUUC-Apl-003221	Anas platyrhynchos	25.54	5.00e-09	52.80
IUUC-Aca-004369	Anolis carolinensis	25.64	1.00e-07	48.10
IUUC-Aly-005460	Arabidopsis lyrata	23.94	3.00e-04	37.40
IUUC-Ath-007414	Arabidopsis thaliana	25.35	4.00e-04	36.60
IUUC-Acl-008122	Aspergillus clavatus	26.74	7.00e-10	56.20
IUUC-Afl-008641	Aspergillus flavus	24.60	3.00e-10	57.40
IUUC-Afu-008941	Aspergillus fumigatus	25.00	7.00e-09	52.80
IUUC-Ang-009852	Aspergillus niger	25.48	1.00e-12	65.50
IUUC-Aor-010041	Aspergillus oryzae	24.60	2.00e-10	57.80
IUUC-Ame-011050	Astyanax mexicanus	22.36	2.00e-08	50.80
IUUC-Bgr-012061	Blumeria graminis	22.40	2.00e-04	38.10
IUUC-Bta-012376	Bos taurus	25.62	2.00e-07	46.60
IUUC-Bci-013706	Botrytis cinerea	20.71	7.00e-06	42.70
IUUC-Bdi-014858	Brachypodium distachyon	24.24	2.00e-06	44.70
IUUC-Bol-015509	Brassica oleracea	25.35	9.00e-05	38.90
IUUC-Bra-017956	Brassica rapa	25.35	8.00e-05	38.90
IUUC-Cfa-020418	Canis familiaris	26.49	5.00e-09	52.80
IUUC-Cpo-022527	Cavia porcellus	25.11	4.00e-08	49.70
IUUC-Csa-023268	Chlorocebus sabaeus	25.54	2.00e-09	54.70
IUUC-Cin-025337	Ciona intestinalis	33.80	7.00e-07	45.40
IUUC-Csv-025935	Ciona savignyi	33.80	3.00e-06	42.00
IUUC-Cgl-026400	Colletotrichum gloeosporioides	22.73	4.00e-09	53.50
IUUC-Cne-027096	Cryptococcus neoformans	24.47	1.00e-12	65.10
IUUC-Dre-028628	Danio rerio	24.39	7.00e-09	52.00
IUUC-Dno-029636	Dasypus novemcinctus	25.41	2.00e-08	50.80
IUUC-Dor-030523	Dipodomys ordii	26.88	4.00e-08	49.70
IUUC-Dse-031163	Dothistroma septosporum	23.67	1.00e-08	51.60
IUUC-Ete-032673	Echinops telfairi	27.03	1.00e-07	48.10
IUUC-Eca-034155	Equus caballus	25.95	7.00e-09	52.00
IUUC-Eeu-034647	Erinaceus europaeus	26.49	9.00e-10	54.70
IUUC-Fca-036073	Felis catus	24.86	1.00e-04	37.70
IUUC-Fal-037212	Ficedula albicollis	24.19	3.00e-07	46.60
IUUC-Fox-037947	Fusarium oxysporum	22.50	9.00e-09	52.40
IUUC-Fso-038221	Fusarium solani	22.77	9.00e-10	55.50
IUUC-Gmo-039682	Gadus morhua	31.58	7.00e-07	45.40
IUUC-Ggr-039809	Gaeumannomyces graminis	20.79	2.00e-03	34.70
IUUC-Gga-040407	Gallus gallus	24.62	2.00e-08	50.40
IUUC-Gac-042107	Gasterosteus aculeatus	24.26	5.00e-09	52.80
IUUC-Gma-043783	Glycine max	22.11	2.00e-03	34.70
IUUC-Ggo-044492	Gorilla gorilla	25.54	4.00e-09	53.10
IUUC-Hsa-046194	Homo sapiens	25.54	2.00e-09	53.50
IUUC-Hvu-047237	Hordeum vulgare	24.12	3.00e-07	47.40
IUUC-Itr-048287	Ictidomys tridecemlineatus	24.89	8.00e-10	55.10
IUUC-Kpa-049342	Komagataella pastoris	26.39	7.00e-06	42.00
IUUC-Lch-049840	Latimeria chalumnae	24.35	2.00e-09	53.90
IUUC-Lpe-051000	Leersia perrieri	25.47	4.00e-07	47.00
IUUC-Loc-052108	Lepisosteus oculatus	26.09	2.00e-12	63.90
IUUC-Lma-053012	Leptosphaeria maculans	20.29	1.00e-03	35.00
IUUC-Laf-054200	Loxodonta africana	25.95	4.00e-09	53.10
IUUC-Mor-056929	Magnaporthe oryzae	20.93	2.00e-05	41.20
IUUC-Mtr-057860	Medicago truncatula	20.10	4.00e-04	37.00
IUUC-Mla-059141	Melampsora laricipopulina	69.23	5.30e-01	27.30
IUUC-Mga-059471	Meleagris gallopavo	22.56	4.00e-07	46.20
IUUC-Mmr-060817	Microcebus murinus	27.03	2.00e-09	54.30
IUUC-Mdo-062697	Monodelphis domestica	28.21	3.00e-09	53.50
IUUC-Mmu-064233	Mus musculus	24.68	4.00e-09	52.80
IUUC-Mpu-066266	Mustela putorius furo	26.49	5.00e-09	52.80
IUUC-Mlu-068073	Myotis lucifugus	25.62	6.00e-08	49.30
IUUC-Nfi-068425	Neosartorya fischeri	23.84	2.00e-07	47.80
IUUC-Ncr-068940	Neurospora crassa	20.97	1.20e-02	32.00
IUUC-Nle-069922	Nomascus leucogenys	25.54	2.00e-09	54.30
IUUC-Ont-071615	Oreochromis niloticus	23.08	1.00e-10	58.20
IUUC-Oan-073522	Ornithorhynchus anatinus	27.10	1.00e-08	50.40
IUUC-Ocu-074543	Oryctolagus cuniculus	26.49	3.00e-09	53.90
IUUC-Oba-075231	Oryza barthii	24.22	6.00e-07	46.20
IUUC-Obr-076211	Oryza brachyantha	22.36	3.00e-06	43.90
IUUC-Ogl-077548	Oryza glaberrima	24.22	9.00e-07	45.40
IUUC-Ogu-078723	Oryza glumaepatula	26.09	2.00e-07	47.40
IUUC-Oin-079772	Oryza indica	26.09	2.00e-07	47.40
IUUC-Olo-080397	Oryza longistaminata	25.47	2.00e-04	37.70
IUUC-Ome-081537	Oryza meridionalis	30.30	5.00e-04	36.20
IUUC-Oni-082597	Oryza nivara	26.09	2.00e-07	47.40
IUUC-Opu-083649	Oryza punctata	25.47	1.00e-06	45.10
IUUC-Oru-084611	Oryza rufipogon	26.09	2.00e-07	47.40
IUUC-Osa-086105	Oryza sativa	26.09	2.00e-07	47.40
IUUC-Oga-088199	Otolemur garnettii	27.57	2.00e-09	54.30
IUUC-Ptr-090997	Pan troglodytes	25.54	4.00e-09	53.10
IUUC-Pan-092860	Papio anubis	25.54	2.00e-09	53.50
IUUC-Psi-093622	Pelodiscus sinensis	23.04	6.00e-08	49.30
IUUC-Pma-094103	Petromyzon marinus	28.21	2.00e-07	47.00
IUUC-Pno-095144	Phaeosphaeria nodorum	21.50	4.00e-08	50.10
IUUC-Ppa-095269	Physcomitrella patens	22.78	2.00e-05	41.20
IUUC-Pfo-096929	Poecilia formosa	23.48	6.00e-12	62.40
IUUC-Pab-098338	Pongo abelii	28.21	3.00e-08	50.40
IUUC-Ppe-102017	Prunus persica	22.36	2.00e-04	37.70
IUUC-Pva-102220	Pteropus vampyrus	26.49	3.00e-09	52.80
IUUC-Pte-104393	Pyrenophora teres	25.42	1.00e-10	58.50
IUUC-Pyt-104539	Pyrenophora triticirepentis	26.14	2.00e-09	54.30
IUUC-Rno-105065	Rattus norvegicus	25.97	4.00e-09	53.10
IUUC-Sha-107648	Sarcophilus harrisii	26.64	8.00e-12	62.00
IUUC-Spo-108064	Schizosaccharomyces pombe	21.76	1.30e-02	31.20
IUUC-Ssl-108419	Sclerotinia sclerotiorum	23.64	3.00e-06	43.50
IUUC-Smo-109269	Selaginella moellendorffii	24.54	2.00e-07	47.40
IUUC-Sit-110804	Setaria italica	22.58	5.00e-03	33.10
IUUC-Sly-111075	Solanum lycopersicum	24.84	1.00e-04	38.50
IUUC-Stu-112619	Solanum tuberosum	24.04	4.00e-05	39.70
IUUC-Sbi-114444	Sorghum bicolor	21.77	1.00e-03	35.40
IUUC-Sre-115122	Sporisorium reilianum	27.12	5.00e-03	33.50
IUUC-Ssc-115716	Sus scrofa	20.61	1.50e-01	28.90
IUUC-Tgu-117379	Taeniopygia guttata	27.83	5.00e-09	52.40
IUUC-Tru-118342	Takifugu rubripes	23.27	7.00e-10	55.50
IUUC-Tsy-119378	Tarsius syrichta	31.17	2.00e-03	33.10
IUUC-Tni-120275	Tetraodon nigroviridis	22.22	1.00e-10	58.20
IUUC-Tca-121152	Theobroma cacao	26.09	4.00e-05	40.00
IUUC-Tre-121956	Trichoderma reesei	22.66	3.00e-07	47.00
IUUC-Tvi-122418	Trichoderma virens	23.04	3.00e-07	47.40
IUUC-Tae-123908	Triticum aestivum	23.74	1.00e-07	48.50
IUUC-Tur-126685	Triticum urartu	21.32	6.00e-05	39.30
IUUC-Tme-126983	Tuber melanosporum	21.29	2.00e-03	34.70
IUUC-Tbe-127855	Tupaia belangeri	27.56	5.00e-09	52.40
IUUC-Ttr-129282	Tursiops truncatus	24.89	2.00e-09	53.90
IUUC-Uma-129501	Ustilago maydis	30.88	6.00e-04	36.20
IUUC-Vda-129809	Verticillium dahliae	20.09	4.00e-07	46.60
IUUC-Vvi-131264	Vitis vinifera	20.20	1.00e-05	41.60
IUUC-Xtr-131816	Xenopus tropicalis	26.75	1.00e-08	51.20
IUUC-Xma-134145	Xiphophorus maculatus	22.88	3.00e-11	60.10
IUUC-Zma-134965	Zea mays	22.89	1.00e-04	38.90

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence