iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000011054.6	ENSRNOT00000015198.6	ENSRNOP00000015198.4
ENSRNOG00000011054.6	ENSRNOT00000083028.1	ENSRNOP00000071739.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
microRNA	RAID2
Protein-protein Interaction
IID
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/UIM	93.87	2.00e-129	458.00	IUUC-Mmu-064111

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MASRAVPVRQ TCCCFNVRVA TVALAIYHIV MSVLLFIEHV VEVARGKVSC RFSKMPYLRL 60
ADLLSSFLLI GVLFIISLSL LFGVVKNREK YLIPFLSLQI MDFLLCLLTL LGSYIELPAY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGCACCATG GCCTCCCGTG CAGTGCCAGT CAGGCAGACA TGCTGTTGTT TCAATGTCCG 60
AGTTGCCACC GTAGCCCTGG CCATCTACCA TATAGTGAGT ATTGGGGTGT CTGGTGTGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR004687--LAPTM4/5
IPR018396--LAPTM_4A/5
IPR018397--Lysosomal-assoc_TM_prot5

Pfam

PF03821--Mtp

Gene Ontology

GO:0005887--C:integral component of plasma membrane
GO:0005765--C:lysosomal membrane
GO:0005764--C:lysosome
GO:0006810--P:transport

KEGG

rno:89783

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002045	Ailuropoda melanoleuca	78.54	2.00e-113	401.00
IUUC-Apl-003791	Anas platyrhynchos	53.82	4.00e-61	227.00
IUUC-Bta-013477	Bos taurus	79.92	6.00e-104	370.00
IUUC-Cja-019476	Callithrix jacchus	82.06	2.00e-118	417.00
IUUC-Cfa-021270	Canis familiaris	79.85	4.00e-106	377.00
IUUC-Cpo-021959	Cavia porcellus	77.65	1.00e-100	358.00
IUUC-Csa-023290	Chlorocebus sabaeus	80.53	7.00e-117	412.00
IUUC-Dno-029099	Dasypus novemcinctus	80.92	2.00e-118	418.00
IUUC-Dor-030794	Dipodomys ordii	74.81	2.00e-92	331.00
IUUC-Ete-032961	Echinops telfairi	69.53	1.00e-84	305.00
IUUC-Eca-033510	Equus caballus	82.42	3.00e-115	407.00
IUUC-Eeu-034658	Erinaceus europaeus	79.69	1.00e-106	379.00
IUUC-Fca-036133	Felis catus	79.09	4.00e-115	407.00
IUUC-Fal-036847	Ficedula albicollis	49.81	5.00e-54	204.00
IUUC-Gga-040267	Gallus gallus	52.78	9.00e-68	249.00
IUUC-Ggo-045536	Gorilla gorilla	80.15	1.00e-115	408.00
IUUC-Hsa-045725	Homo sapiens	78.63	1.00e-108	385.00
IUUC-Itr-048309	Ictidomys tridecemlineatus	69.47	1.00e-88	318.00
IUUC-Lch-050140	Latimeria chalumnae	36.09	4.00e-26	111.00
IUUC-Loc-052067	Lepisosteus oculatus	28.52	1.00e-17	83.20
IUUC-Laf-053429	Loxodonta africana	75.47	1.00e-98	352.00
IUUC-Mcc-054614	Macaca mulatta	80.53	4.00e-117	413.00
IUUC-Meu-056154	Macropus eugenii	68.44	2.00e-97	348.00
IUUC-Mga-059988	Meleagris gallopavo	51.34	2.00e-67	249.00
IUUC-Mmr-061540	Microcebus murinus	79.77	3.00e-113	400.00
IUUC-Mdo-062233	Monodelphis domestica	68.56	9.00e-99	353.00
IUUC-Mmu-064111	Mus musculus	93.87	3.00e-138	483.00
IUUC-Mpu-066426	Mustela putorius furo	76.43	3.00e-109	387.00
IUUC-Mlu-066997	Myotis lucifugus	75.31	1.00e-98	352.00
IUUC-Nle-069725	Nomascus leucogenys	79.39	2.00e-115	408.00
IUUC-Opr-070198	Ochotona princeps	81.96	4.00e-98	350.00
IUUC-Oan-073370	Ornithorhynchus anatinus	61.54	7.00e-70	256.00
IUUC-Ocu-074337	Oryctolagus cuniculus	83.67	2.00e-109	388.00
IUUC-Oga-088795	Otolemur garnettii	80.23	2.00e-113	401.00
IUUC-Oar-089326	Ovis aries	80.30	2.00e-115	407.00
IUUC-Ptr-090612	Pan troglodytes	78.28	4.00e-99	354.00
IUUC-Pan-091790	Papio anubis	80.92	8.00e-118	416.00
IUUC-Psi-093316	Pelodiscus sinensis	50.00	5.00e-64	237.00
IUUC-Pab-097954	Pongo abelii	80.15	9.00e-116	409.00
IUUC-Pca-100283	Procavia capensis	82.44	3.00e-108	384.00
IUUC-Pva-102601	Pteropus vampyrus	59.23	3.00e-78	284.00
IUUC-Sha-107231	Sarcophilus harrisii	67.05	2.00e-89	322.00
IUUC-Ssc-115840	Sus scrofa	79.12	1.00e-105	375.00
IUUC-Tgu-117333	Taeniopygia guttata	53.16	3.00e-67	248.00
IUUC-Tsy-119025	Tarsius syrichta	54.15	6.00e-58	216.00
IUUC-Tbe-128046	Tupaia belangeri	69.08	3.00e-95	341.00
IUUC-Ttr-129234	Tursiops truncatus	81.75	6.00e-119	419.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence