iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
microRNA	RAID2
Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.40e-19	67.6	143	175

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDlr 31
           H+ s tcl++  ++  +lvsGs+D+t+k +D+r
   Q: 143  HERSATCLDWhaTTpYILVSGSRDCTVKSYDMR 175
           9999*******9665778***********9986 PP

Organism

Caenorhabditis elegans

Protein Sequence
(Fasta)

MEEPDPNNVF KKPSPEILFA EYGRSSTEGE DPTPENKRVI DLYDPVDAMS LNREKDRVVV 60
SGIRGVLQII KIQNSTNDLI EGPSIVKDLD MRVYRKGKVN ILYSAQNVKW NQLYDQYIAT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CACATGGAAG AACCGGATCC CAACAATGTG TTTAAAAAAC CGTCGCCCGA GATTTTGTTT 60
GCAGAATATG GAAGAAGTTC CACCGAAGGC GAGGTAAATA TTTTATAAAT CTCAGAGTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

KEGG

cel:CELE_Y32H12A.8

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001294	Ailuropoda melanoleuca	33.26	2.00e-57	216.00
IUUC-Apl-004177	Anas platyrhynchos	32.65	1.00e-50	193.00
IUUC-Acl-008356	Aspergillus clavatus	26.58	2.00e-26	113.00
IUUC-Afu-009013	Aspergillus fumigatus	24.20	2.00e-22	100.00
IUUC-Ani-009185	Aspergillus nidulans	25.61	1.00e-28	120.00
IUUC-Ang-009533	Aspergillus niger	24.30	3.00e-23	103.00
IUUC-Aor-010148	Aspergillus oryzae	25.36	7.00e-26	112.00
IUUC-Ate-010528	Aspergillus terreus	23.66	9.00e-26	111.00
IUUC-Ame-011386	Astyanax mexicanus	33.48	7.00e-58	217.00
IUUC-Bgr-012040	Blumeria graminis	27.87	1.00e-16	81.60
IUUC-Bta-013092	Bos taurus	33.92	8.00e-57	214.00
IUUC-Bci-013751	Botrytis cinerea	24.80	9.00e-22	98.20
IUUC-Cja-019083	Callithrix jacchus	32.69	1.00e-26	113.00
IUUC-Cfa-020652	Canis familiaris	32.79	3.00e-34	139.00
IUUC-Cpo-021847	Cavia porcellus	33.92	9.00e-57	213.00
IUUC-Csa-023407	Chlorocebus sabaeus	33.70	3.00e-56	212.00
IUUC-Cin-025129	Ciona intestinalis	31.65	5.00e-49	187.00
IUUC-Csv-025991	Ciona savignyi	29.98	2.00e-49	189.00
IUUC-Cgl-026445	Colletotrichum gloeosporioides	27.24	2.00e-19	90.50
IUUC-Dre-028566	Danio rerio	32.47	2.00e-56	213.00
IUUC-Dno-029775	Dasypus novemcinctus	31.86	4.00e-21	95.10
IUUC-Dor-030781	Dipodomys ordii	28.91	2.00e-11	63.50
IUUC-Dse-031422	Dothistroma septosporum	22.19	2.00e-18	87.40
IUUC-Dme-032155	Drosophila melanogaster	27.67	1.00e-54	206.00
IUUC-Ete-032984	Echinops telfairi	33.26	2.00e-58	219.00
IUUC-Eca-034065	Equus caballus	33.26	3.00e-55	208.00
IUUC-Eeu-034460	Erinaceus europaeus	31.30	8.00e-45	174.00
IUUC-Fca-035432	Felis catus	33.26	2.00e-57	216.00
IUUC-Fal-037575	Ficedula albicollis	31.85	4.00e-55	208.00
IUUC-Fox-037810	Fusarium oxysporum	25.09	1.00e-15	77.80
IUUC-Fso-038116	Fusarium solani	24.88	5.00e-16	79.30
IUUC-Gmo-038937	Gadus morhua	31.57	1.00e-55	209.00
IUUC-Ggr-039930	Gaeumannomyces graminis	23.50	7.00e-17	82.40
IUUC-Gga-040827	Gallus gallus	31.91	8.00e-46	177.00
IUUC-Gac-042168	Gasterosteus aculeatus	31.56	4.00e-55	208.00
IUUC-Ggo-044772	Gorilla gorilla	27.43	2.00e-34	140.00
IUUC-Hsa-046676	Homo sapiens	27.45	7.00e-35	141.00
IUUC-Itr-048506	Ictidomys tridecemlineatus	34.14	1.00e-58	219.00
IUUC-Kpa-049109	Komagataella pastoris	24.46	2.00e-25	110.00
IUUC-Lch-050410	Latimeria chalumnae	31.35	3.00e-53	201.00
IUUC-Loc-051786	Lepisosteus oculatus	33.41	1.00e-57	217.00
IUUC-Lma-053068	Leptosphaeria maculans	24.10	2.00e-22	100.00
IUUC-Laf-054171	Loxodonta africana	33.92	2.00e-58	219.00
IUUC-Mcc-055764	Macaca mulatta	33.44	6.00e-34	138.00
IUUC-Meu-055941	Macropus eugenii	35.25	3.00e-17	82.80
IUUC-Mga-059495	Meleagris gallopavo	31.91	8.00e-46	177.00
IUUC-Mvi-060314	Microbotryum violaceum	23.60	2.00e-11	64.30
IUUC-Mmr-061375	Microcebus murinus	33.04	3.00e-56	212.00
IUUC-Mdo-062605	Monodelphis domestica	32.45	2.00e-54	206.00
IUUC-Mmu-064313	Mus musculus	33.33	8.00e-58	217.00
IUUC-Mpu-066860	Mustela putorius furo	33.04	3.00e-57	215.00
IUUC-Mlu-067268	Myotis lucifugus	27.29	9.00e-37	147.00
IUUC-Nfi-068523	Neosartorya fischeri	24.20	6.00e-23	102.00
IUUC-Nle-070011	Nomascus leucogenys	29.69	2.00e-11	63.90
IUUC-Opr-070270	Ochotona princeps	32.79	2.00e-34	139.00
IUUC-Ont-071681	Oreochromis niloticus	31.87	3.00e-56	212.00
IUUC-Oan-072887	Ornithorhynchus anatinus	29.69	8.00e-12	64.70
IUUC-Ola-086651	Oryzias latipes	26.76	5.00e-46	178.00
IUUC-Oga-088730	Otolemur garnettii	28.16	3.00e-36	145.00
IUUC-Oar-090328	Ovis aries	36.00	5.00e-33	133.00
IUUC-Ptr-091668	Pan troglodytes	27.39	2.00e-35	142.00
IUUC-Pan-092619	Papio anubis	33.70	1.00e-56	213.00
IUUC-Psi-093906	Pelodiscus sinensis	31.40	4.00e-54	204.00
IUUC-Pno-094980	Phaeosphaeria nodorum	25.34	4.00e-24	106.00
IUUC-Pfo-096284	Poecilia formosa	32.31	4.00e-57	214.00
IUUC-Pab-097668	Pongo abelii	30.98	6.00e-49	187.00
IUUC-Pca-100865	Procavia capensis	32.07	9.00e-53	200.00
IUUC-Pva-102869	Pteropus vampyrus	27.49	7.00e-36	144.00
IUUC-Pte-104040	Pyrenophora teres	24.35	2.00e-24	107.00
IUUC-Pyt-104648	Pyrenophora triticirepentis	28.57	2.00e-12	67.00
IUUC-Rno-105555	Rattus norvegicus	33.33	2.00e-57	216.00
IUUC-Sha-106936	Sarcophilus harrisii	32.68	7.00e-32	131.00
IUUC-Sja-107793	Schizosaccharomyces japonicus	21.89	5.00e-15	75.10
IUUC-Spo-108236	Schizosaccharomyces pombe	25.05	8.00e-34	137.00
IUUC-Ssl-108603	Sclerotinia sclerotiorum	23.82	6.00e-21	95.50
IUUC-Sar-113686	Sorex araneus	35.97	3.00e-17	82.80
IUUC-Ssc-116279	Sus scrofa	34.09	5.00e-35	142.00
IUUC-Tgu-116557	Taeniopygia guttata	33.48	5.00e-25	108.00
IUUC-Tru-118545	Takifugu rubripes	30.79	5.00e-54	204.00
IUUC-Tsy-119306	Tarsius syrichta	30.88	4.00e-07	49.30
IUUC-Tni-120098	Tetraodon nigroviridis	31.57	2.00e-55	209.00
IUUC-Tre-121960	Trichoderma reesei	25.34	9.00e-13	68.60
IUUC-Tvi-122484	Trichoderma virens	26.37	1.00e-14	74.70
IUUC-Tme-127028	Tuber melanosporum	27.39	3.00e-38	152.00
IUUC-Ttr-128346	Tursiops truncatus	33.77	5.00e-35	141.00
IUUC-Vda-129729	Verticillium dahliae	25.00	1.00e-18	88.20
IUUC-Vpa-130493	Vicugna pacos	28.91	1.00e-11	63.90
IUUC-Xtr-131862	Xenopus tropicalis	32.09	2.00e-54	205.00
IUUC-Xma-133385	Xiphophorus maculatus	32.31	4.00e-57	215.00
IUUC-Yli-134444	Yarrowia lipolytica	27.36	1.00e-17	84.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence