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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Cel-018238
Ensembl Protein ID CC4.3.1
UniProt Accession G5EEG7; G5EEG7_CAEEL
Genbank Protein ID AAK00353.1; CAB04014.1
Protein Name SMU-1; Suppressor of Mec and Unc defects
Genbank Nucleotide ID AF330595; BX284601
Gene Name smu-1; CC4.3; CELE_CC4.3
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
WBGene00004895 CC4.3.1 CC4.3.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
microRNAmiRNAMapRAID2
Protein-protein Interaction
IIDiRefIndex
Protein 3D Structure
PDB
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.40e-32 110.6 266 300
UBD/Beta-Prp 2.10e-47 162.0 212 509
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 5    svtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
            v+c++f  d  +l++Gs Dg+ikvW + tg++l+
   Q: 266  AVRCISFsRDsEMLATGSIDGKIKVWKVETGDCLR 300
           59******777**********************96 PP
   

   UBD/Beta-Prp
   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkl........lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlk.ghedsvls 99
           + ks+  +  fspd ++l++gs+dg i+vw++ +gkl           l   +a+v++++fs+d+++l+tgs D+ ikvw ++tg+c++ +  +h++ v++
   Q: 212  STKSYPESAVFSPDANYLVSGSKDGFIEVWNYMNGKLrkdlkyqaQDNLMMMDAAVRCISFSRDSEMLATGSIDGKIKVWKVETGDCLRRFDrAHTKGVCA 312
           56788888999**************************555555555555555555************************************989******* PP
   S: 100  lsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl.tgghtdsvysls..fdsngkelvs 197
           ++fs+++++++sG++d ++rv  +++g+cl+   +gh++ ++ v+++++gn ++s+s+D+ +r+W  k+g++l t+  g  + ++  ++   +s+ ++++ 
   Q: 313  VRFSKDNSHILSGGNDHVVRVHGMKSGKCLK-EMRGHSSYITDVRYSDEGNHIISCSTDGSIRVWHGKSGECLSTFrVGSEDYPILNVIpiPKSDPPQMIV 412
           *******************************.********************************************634456677777766444459**** PP
   S: 198  gsldgtvklwdlqtgecvrtlnght....dnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsfgdnvlvlgsedskvniwk 293
           + + +t+ ++++ +g++vrt++  +    d+++++ +sp++e+ +  ++Dg+ +++ + sg+l +tl  ++   i  a+ ++ +n +++ +ed+ +++w 
   Q: 413  CNRSNTLYVVNI-SGQVVRTMTSGKrekgDFINCI-LSPKGEWAYAIAEDGVMYCFMVLSGTLETTLPVTERLPIGLAH-HPHQNLIASYAEDGLLKLWT 509
           ************.7888888877664554566654.678******************************9988888888.******************95 PP
   
Organism Caenorhabditis elegans
Protein Sequence
(Fasta)
MSSIEIESSD VIRLIEQFLK ESNLHRTLAI LQEETNVSLN TVDSIDGFCN EITSGNWDNV 60
LKTVQSLKLP AKKLIDLYEH VIIELVELRE LATARLVARQ TDPMILLKQI DPDRFARLES 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Cel-018238|E3,WD_repeat;UBD,Beta-Prp|Caenorhabditis elegans
Please wait for a moment...
Nucleotide Sequence
(Fasta)
AGGCTGGCGC ACTTCTCGTG TCCGAGGATA TTCGAATTTT ACACGTCATT TTCAGCCGTT 60
TTTCACCGAA TTTTCGCTGA AAATGTCATC GATTGAGATC GAATCTTCAG AGTAAGTTTA 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Cel-018238|E3,WD_repeat;UBD,Beta-Prp|Caenorhabditis elegans
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat
Interpro

IPR006595--CTLH_C
IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
PROSITE

PS50897--CTLH
PS50896--LISH
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40
Gene Ontology

GO:0005634--C:nucleus
GO:0009792--P:embryo development ending in birth or egg hatching
GO:0040011--P:locomotion
GO:0007638--P:mechanosensory behavior
GO:0048644--P:muscle organ morphogenesis
GO:0002119--P:nematode larval development
GO:0048666--P:neuron development
GO:0000381--P:regulation of alternative mRNA splicing, via spliceosome
KEGG cel:CELE_CC4.3
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000857 Aegilops tauschii 54.11 5.00e-42 161.00
IUUC-Aml-001330 Ailuropoda melanoleuca 62.04 0.00e+00 678.00
IUUC-Atr-002570 Amborella trichopoda 52.15 3.00e-165 573.00
IUUC-Apl-003826 Anas platyrhynchos 61.05 0.00e+00 646.00
IUUC-Aca-005183 Anolis carolinensis 61.99 0.00e+00 675.00
IUUC-Aly-005632 Arabidopsis lyrata 50.20 2.00e-162 563.00
IUUC-Ath-007219 Arabidopsis thaliana 50.59 2.00e-161 560.00
IUUC-Ame-011374 Astyanax mexicanus 62.82 0.00e+00 686.00
IUUC-Bta-012890 Bos taurus 62.04 0.00e+00 678.00
IUUC-Bdi-014061 Brachypodium distachyon 52.75 5.00e-165 572.00
IUUC-Bol-016332 Brassica oleracea 51.47 7.00e-167 578.00
IUUC-Bra-017612 Brassica rapa 51.27 4.00e-166 576.00
IUUC-Cja-019336 Callithrix jacchus 62.04 0.00e+00 678.00
IUUC-Cfa-021108 Canis familiaris 62.04 0.00e+00 678.00
IUUC-Cpo-022052 Cavia porcellus 62.04 0.00e+00 678.00
IUUC-Cre-022595 Chlamydomonas reinhardtii 52.94 7.00e-164 568.00
IUUC-Csa-023488 Chlorocebus sabaeus 62.04 0.00e+00 678.00
IUUC-Cho-025010 Choloepus hoffmanni 55.38 4.00e-169 586.00
IUUC-Cin-025251 Ciona intestinalis 59.30 0.00e+00 653.00
IUUC-Csv-026092 Ciona savignyi 54.61 3.00e-169 587.00
IUUC-Dre-027382 Danio rerio 63.01 0.00e+00 687.00
IUUC-Dno-029007 Dasypus novemcinctus 62.23 0.00e+00 678.00
IUUC-Dor-030180 Dipodomys ordii 54.08 9.00e-122 428.00
IUUC-Dme-031762 Drosophila melanogaster 60.16 0.00e+00 661.00
IUUC-Ete-032933 Echinops telfairi 61.40 2.00e-161 560.00
IUUC-Eca-033864 Equus caballus 61.43 0.00e+00 664.00
IUUC-Eeu-034635 Erinaceus europaeus 53.79 1.00e-134 471.00
IUUC-Fca-036119 Felis catus 62.04 0.00e+00 678.00
IUUC-Fal-037396 Ficedula albicollis 61.37 0.00e+00 657.00
IUUC-Gmo-038962 Gadus morhua 61.06 0.00e+00 669.00
IUUC-Gga-040134 Gallus gallus 62.23 0.00e+00 678.00
IUUC-Gac-041630 Gasterosteus aculeatus 61.45 0.00e+00 675.00
IUUC-Gma-043928 Glycine max 53.32 8.00e-171 592.00
IUUC-Ggo-045061 Gorilla gorilla 61.79 0.00e+00 674.00
IUUC-Hsa-046215 Homo sapiens 62.04 0.00e+00 678.00
IUUC-Hvu-047799 Hordeum vulgare 57.06 2.00e-125 440.00
IUUC-Itr-048826 Ictidomys tridecemlineatus 62.04 0.00e+00 678.00
IUUC-Lch-050209 Latimeria chalumnae 58.01 7.00e-177 612.00
IUUC-Lpe-050740 Leersia perrieri 52.64 3.00e-164 570.00
IUUC-Loc-052739 Lepisosteus oculatus 57.25 9.00e-176 608.00
IUUC-Laf-053895 Loxodonta africana 61.91 0.00e+00 674.00
IUUC-Mcc-055183 Macaca mulatta 62.04 0.00e+00 678.00
IUUC-Mtr-057730 Medicago truncatula 51.37 9.00e-162 561.00
IUUC-Mga-059222 Meleagris gallopavo 60.48 7.00e-157 545.00
IUUC-Mmr-061749 Microcebus murinus 61.13 0.00e+00 667.00
IUUC-Mdo-062552 Monodelphis domestica 62.16 0.00e+00 678.00
IUUC-Mmu-063228 Mus musculus 62.04 0.00e+00 678.00
IUUC-Mac-065084 Musa acuminata 53.52 2.00e-169 587.00
IUUC-Mpu-066162 Mustela putorius furo 62.04 0.00e+00 678.00
IUUC-Mlu-067471 Myotis lucifugus 61.84 0.00e+00 677.00
IUUC-Nle-070129 Nomascus leucogenys 62.04 0.00e+00 678.00
IUUC-Opr-071176 Ochotona princeps 61.43 0.00e+00 664.00
IUUC-Ont-071830 Oreochromis niloticus 62.04 0.00e+00 681.00
IUUC-Oan-072778 Ornithorhynchus anatinus 62.04 0.00e+00 678.00
IUUC-Ocu-074570 Oryctolagus cuniculus 62.04 0.00e+00 678.00
IUUC-Oba-075507 Oryza barthii 53.42 7.00e-166 575.00
IUUC-Obr-076672 Oryza brachyantha 53.62 2.00e-167 580.00
IUUC-Ogl-077110 Oryza glaberrima 53.42 7.00e-166 575.00
IUUC-Ogu-077976 Oryza glumaepatula 53.42 7.00e-166 575.00
IUUC-Oin-079525 Oryza indica 53.42 7.00e-166 575.00
IUUC-Olo-080391 Oryza longistaminata 51.62 1.00e-164 571.00
IUUC-Oni-082778 Oryza nivara 53.42 7.00e-166 575.00
IUUC-Opu-083710 Oryza punctata 53.42 6.00e-166 575.00
IUUC-Oru-084250 Oryza rufipogon 53.42 7.00e-166 575.00
IUUC-Osa-085363 Oryza sativa 53.42 7.00e-166 575.00
IUUC-Ola-087092 Oryzias latipes 61.84 0.00e+00 676.00
IUUC-Olu-087753 Ostreococcus lucimarinus 47.08 3.00e-127 447.00
IUUC-Oga-088278 Otolemur garnettii 58.14 1.00e-176 611.00
IUUC-Oar-089664 Ovis aries 61.67 0.00e+00 674.00
IUUC-Ptr-090991 Pan troglodytes 62.04 0.00e+00 678.00
IUUC-Pan-092697 Papio anubis 62.04 0.00e+00 678.00
IUUC-Psi-093204 Pelodiscus sinensis 61.17 0.00e+00 656.00
IUUC-Ppa-095325 Physcomitrella patens 52.73 5.00e-167 579.00
IUUC-Pfo-096988 Poecilia formosa 62.23 0.00e+00 681.00
IUUC-Pab-098288 Pongo abelii 62.04 0.00e+00 678.00
IUUC-Pop-098787 Populus trichocarpa 52.35 5.00e-166 576.00
IUUC-Pca-100583 Procavia capensis 58.45 2.00e-173 600.00
IUUC-Ppe-101307 Prunus persica 53.12 4.00e-170 589.00
IUUC-Pva-102711 Pteropus vampyrus 62.04 0.00e+00 678.00
IUUC-Rno-105614 Rattus norvegicus 62.04 0.00e+00 678.00
IUUC-Sha-107017 Sarcophilus harrisii 61.84 0.00e+00 677.00
IUUC-Smo-108800 Selaginella moellendorffii 52.94 1.00e-157 548.00
IUUC-Sit-110278 Setaria italica 53.03 2.00e-161 560.00
IUUC-Sly-111777 Solanum lycopersicum 53.62 7.00e-169 585.00
IUUC-Stu-112293 Solanum tuberosum 53.62 1.00e-168 585.00
IUUC-Sar-112955 Sorex araneus 56.25 5.00e-169 586.00
IUUC-Sbi-114802 Sorghum bicolor 52.45 4.00e-161 559.00
IUUC-Ssc-116054 Sus scrofa 62.04 0.00e+00 678.00
IUUC-Tgu-116909 Taeniopygia guttata 61.06 0.00e+00 669.00
IUUC-Tru-118195 Takifugu rubripes 61.64 0.00e+00 678.00
IUUC-Tsy-119420 Tarsius syrichta 56.95 2.00e-175 607.00
IUUC-Tni-120416 Tetraodon nigroviridis 61.25 0.00e+00 672.00
IUUC-Tca-121653 Theobroma cacao 51.86 3.00e-160 556.00
IUUC-Tae-125609 Triticum aestivum 52.55 7.00e-167 578.00
IUUC-Tur-126197 Triticum urartu 51.65 3.00e-117 413.00
IUUC-Tbe-128009 Tupaia belangeri 58.65 9.00e-123 432.00
IUUC-Ttr-128719 Tursiops truncatus 57.53 3.00e-174 603.00
IUUC-Vpa-130579 Vicugna pacos 61.84 0.00e+00 672.00
IUUC-Vvi-131127 Vitis vinifera 53.42 7.00e-170 588.00
IUUC-Xtr-132950 Xenopus tropicalis 58.06 8.00e-177 612.00
IUUC-Xma-133537 Xiphophorus maculatus 62.23 0.00e+00 681.00
Created Date 25-Jun-2017

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