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Basic Information Integrated Annotations

Tag Content
UUCD2 ID IUUC-Rno-106105
UUCD1 version UUC-RaN-00345
Ensembl Protein ID ENSRNOP00000028786.6
UniProt Accession D3ZZP8; D3ZZP8_RAT
Genbank Protein ID ENSRNOP00000028786
Protein Name Cullin 9
Genbank Nucleotide ID AABR07066803
Gene Name Cul9
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000018372.7 ENSRNOT00000080815.1 ENSRNOP00000073679.1
ENSRNOG00000018372.7 ENSRNOT00000028786.7 ENSRNOP00000028786.6
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
miRNAMapRAID2
Protein-protein Interaction
IID
Post-translational Modifications (PTMs)
CPLMdbPAF
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/Cullin 2.40e-124 416.7 1289 1808
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/Cullin

   S: 66   LktynreWekfreqlkvlrkifayldrtyvkkskkvsevrkLaldlwrkeivedikkrllelllklieaeRkgeavdrrllsgvves 152
    L ++W+ freql++ +++f y+ + +++w+++i+ed ++rll+l +l++ +R+++++++r+l++++++
   Q: 1289 LGPKPTFWPLFREQLCRRTCLF------YTIR-----------AQAWSRDIAED-RQRLLQLYPRLNRVLRHEQNFADRFLPDDEAA 1357
    5555689***************......9999...........***********.******************************** PP
   S: 153 lveLslnklaiykesFEakfleatqefykaesaeflqe.nevdeYlkkvearlneeeeraaryleestetkLlevvekeliakhles 238
    +a++k+++Ea++++ +q+++++++ +++ + +d+Yl+++e++ + ++a+++++++++++Ll++ve+ +
   Q: 1358 --------QALGKTCWEALVSPLVQNITSPDAGGVSSLgWLLDQYLEHREKARSRQGQAASFASQVRRLCHLLVHVEAPPGP----- 1431
    ........**************************************************************************..... PP
   S: 239 llaelvallrdkktedlsrmykLlsrvln..gleellkeleshikeqgkaaltaeekekdpkkyVerllelknklqklvseaFnnda 323
    ++ ++ +k ++ ++ + + v++ +l+++++++ ++++ q++++l++++++ d +V+r+++l+++lq++ se+F+++a
   Q: 1432 --SPEPSSQPLSKSSKSQDGSPAPAPVRPstTLRNITQCWLAVVQGQASRFLASAWRASD---FVPRYCDLYERLQRAGSELFGPRA 1513
    ..999999999999999**********9999*****************************...************************ PP
   S: 324 kFlkaldkafetfvnknsvlkaakspEllAryiDqlLrks.skglteeeleaqldkvllvfkyisekdv...FekyYkkhLakRLls 406
    +F+ al+++f+ +++++s+l+aa+ +E++Ar+iDq+++++ ++g+ + e++ +l+++l+ ++++s++++ Fe++Y+ ++a+RLls
   Q: 1514 AFTLALRSGFSGALLQQSFLTAAHISEQFARHIDQQIQGGlLGGAAGVEMLGRLQRHLEPIMVLSGLELattFEHFYQYYMADRLLS 1600
    *************************************************************************************** PP
   S: 407 gksasseaEesviekLkeecgaeftskL.erMfqdlkvSedlnrqFk.................................eekente 459
    ss++E++v+e++ g++f+++L + M+q+l +Se+l+r F + +e
   Q: 1601 --LGSSWLEGAVLEQI----GLCFPNRLpQLMLQSLRTSEELQRGFLlfqlqqldrqlleqgeqeewklerleeedrgqeTGRELLT 1681
    ..**************....********************************************************99866667778 PP
   S: 460 esesvelsvlvLsagaWpta..set..ekvsLPaelektiekfeefY........lekhsgRkLqWqhtlgraelkaelkkgkyelq 534
    e++++++svlvLs+++Wp++ + ++ +LP+e++++++ f++fY l+++++R+LqW++ lgrael++ g ++l+
   Q: 1682 EDPGPAISVLVLSPRCWPVSplCYLhqPRKHLPTEFCDALDGFSSFYshsqhypvLDMGPHRRLQWTW-LGRAELQF----GDQTLH 1763
    99******************98544559****************************************.********....****** PP
   S: 535 VstfQmavLLafnnsekvsveelkkatelpeeeLrrtlqsLvssk 579
    Vst+Qm++LL fn++e+vsve l ++l++e+L+++l +L+s
   Q: 1764 VSTVQMWLLLNFNQTEEVSVEILLRNSGLSPELLHQALLPLTSDS 1808
    ******************************************964 PP
   

Organism Rattus norvegicus
Protein Sequence
(Fasta)
MVGEQRAGDL MVPLGPRLQA YPEELIRQRP GHDGHPEYLI RWRVLKCSEE GKVSLEEEKT 60
EYLLMWLSAP EVYANCPMLL RERSVSKGPQ YEPTGEVGSF PRDPGGLDEL AMAEMEDDVR 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Rno-106105|E3,Cullin|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CGGAAAGGAG CTGTGGAGGA GGCGGGCCGA CCTGCGGACC CGCTGCTGGG TGACAGCGAA 60
GGTTCAGCCG GGTGGTGAGA GGTGAGAAGA GAGCTCTGCG CGGAGCTGTC CCTTCTCCTT 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Rno-106105|E3,Cullin|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR004939--APC_su10/DOC_dom
IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR016150--Casein_kin_II_reg-sub_b-sht
IPR021097--CPH_domain
IPR031222--CUL9
IPR016157--Cullin_CS
IPR016158--Cullin_homology
IPR001373--Cullin_N
IPR019559--Cullin_neddylation_domain
IPR008979--Galactose-bd-like
IPR002867--IBR_dom
IPR014722--Rib_L2_dom2
IPR011030--Vitellinogen_superhlx
IPR011991--WHTH_DNA-bd_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS01256--CULLIN_1
PS50069--CULLIN_2
PS51284--DOC
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF03256--ANAPC10
PF11515--Cul7
PF00888--Cullin
PF10557--Cullin_Nedd8
PF01485--IBR

SMART

SM01337--APC10
SM00884--Cullin_Nedd8
SM00647--IBR

Gene Ontology

GO:0031461--C:cullin-RING ubiquitin ligase complex
GO:0005829--C:cytosol
GO:0008270--F:zinc ion binding
GO:0000226--P:microtubule cytoskeleton organization
GO:0016567--P:protein ubiquitination
GO:0007088--P:regulation of mitotic nuclear division
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG rno:316228
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001405 Ailuropoda melanoleuca 85.41 0.00e+00 4015.00
IUUC-Apl-003458 Anas platyrhynchos 63.55 0.00e+00 713.00
IUUC-Aca-004815 Anolis carolinensis 54.54 0.00e+00 2430.00
IUUC-Ame-010611 Astyanax mexicanus 49.54 0.00e+00 2205.00
IUUC-Bta-012877 Bos taurus 83.16 0.00e+00 3817.00
IUUC-Cja-019255 Callithrix jacchus 85.87 0.00e+00 3970.00
IUUC-Cfa-020119 Canis familiaris 85.77 0.00e+00 3996.00
IUUC-Cpo-022473 Cavia porcellus 80.72 0.00e+00 3659.00
IUUC-Csa-024157 Chlorocebus sabaeus 85.75 0.00e+00 3982.00
IUUC-Cho-024879 Choloepus hoffmanni 81.32 0.00e+00 834.00
IUUC-Cin-025402 Ciona intestinalis 31.84 2.00e-105 377.00
IUUC-Dno-028904 Dasypus novemcinctus 82.92 0.00e+00 3855.00
IUUC-Dor-030112 Dipodomys ordii 83.79 0.00e+00 1295.00
IUUC-Ete-032516 Echinops telfairi 75.39 0.00e+00 1284.00
IUUC-Eca-034394 Equus caballus 84.54 0.00e+00 3879.00
IUUC-Eeu-035166 Erinaceus europaeus 83.89 0.00e+00 2033.00
IUUC-Fca-035740 Felis catus 85.17 0.00e+00 3972.00
IUUC-Fal-036672 Ficedula albicollis 50.45 0.00e+00 1507.00
IUUC-Gga-040154 Gallus gallus 60.52 0.00e+00 873.00
IUUC-Ggo-045570 Gorilla gorilla 86.12 0.00e+00 3950.00
IUUC-Hsa-046690 Homo sapiens 85.99 0.00e+00 3946.00
IUUC-Itr-048680 Ictidomys tridecemlineatus 86.19 0.00e+00 4051.00
IUUC-Loc-052706 Lepisosteus oculatus 51.20 0.00e+00 2269.00
IUUC-Mcc-055727 Macaca mulatta 85.75 0.00e+00 4023.00
IUUC-Meu-056074 Macropus eugenii 74.59 0.00e+00 1444.00
IUUC-Mga-059683 Meleagris gallopavo 49.40 1.00e-97 349.00
IUUC-Mmr-060869 Microcebus murinus 85.55 0.00e+00 3986.00
IUUC-Mdo-062902 Monodelphis domestica 72.22 0.00e+00 3196.00
IUUC-Mmu-063991 Mus musculus 92.44 0.00e+00 4296.00
IUUC-Mpu-065974 Mustela putorius furo 84.96 0.00e+00 3956.00
IUUC-Nle-069292 Nomascus leucogenys 86.95 0.00e+00 2554.00
IUUC-Opr-071020 Ochotona princeps 82.84 0.00e+00 2054.00
IUUC-Ont-071953 Oreochromis niloticus 49.84 0.00e+00 2119.00
IUUC-Oan-073534 Ornithorhynchus anatinus 58.04 0.00e+00 2018.00
IUUC-Ocu-074244 Oryctolagus cuniculus 84.96 0.00e+00 3916.00
IUUC-Ola-087072 Oryzias latipes 49.94 0.00e+00 2172.00
IUUC-Oga-088310 Otolemur garnettii 83.47 0.00e+00 3900.00
IUUC-Oar-090174 Ovis aries 83.08 0.00e+00 3779.00
IUUC-Ptr-091410 Pan troglodytes 85.95 0.00e+00 3921.00
IUUC-Pan-091856 Papio anubis 85.37 0.00e+00 2524.00
IUUC-Pma-094192 Petromyzon marinus 44.94 0.00e+00 1381.00
IUUC-Pfo-096773 Poecilia formosa 54.25 0.00e+00 922.00
IUUC-Pab-098635 Pongo abelii 87.35 0.00e+00 2754.00
IUUC-Pca-100539 Procavia capensis 86.26 0.00e+00 1279.00
IUUC-Pva-102813 Pteropus vampyrus 80.45 0.00e+00 1535.00
IUUC-Sha-106896 Sarcophilus harrisii 76.62 0.00e+00 1129.00
IUUC-Ssl-108406 Sclerotinia sclerotiorum 58.33 2.00e-07 50.40
IUUC-Sar-113132 Sorex araneus 77.73 0.00e+00 1231.00
IUUC-Ssc-116000 Sus scrofa 84.63 0.00e+00 3904.00
IUUC-Tgu-116915 Taeniopygia guttata 62.04 2.00e-135 475.00
IUUC-Tru-118013 Takifugu rubripes 53.76 0.00e+00 1506.00
IUUC-Tsy-119037 Tarsius syrichta 76.31 0.00e+00 997.00
IUUC-Tni-120062 Tetraodon nigroviridis 53.71 0.00e+00 1680.00
IUUC-Ttr-128780 Tursiops truncatus 80.29 0.00e+00 2462.00
IUUC-Vpa-130086 Vicugna pacos 79.79 2.00e-173 603.00
IUUC-Xtr-132882 Xenopus tropicalis 48.86 0.00e+00 1793.00
Created Date 25-Jun-2017

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