iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gga-041241

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AADN04023951

Gene Name

USP54

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSGALG00000005232.6	ENSGALT00000008407.6	ENSGALP00000008393.6

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	5.00e-24	85.5	32	349

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNl..gNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelwkskkkavspre.....llkalkkeaee 83
           Gl+N   +N+C++NS+LQ+L+++  +r+ + +  ++k+  +       ++ ++l+ +f+++ ++++++v p++     l k++++e+ +
   Q: 32   GLSNEpgQNSCFLNSALQVLWHLDIFRRSFRQISTHKCMGD------SCIFCALKGIFNQF-QCSSEKVLPSDalrtaLAKTFQDEQ-R 112
           88887668************************999999986......69************.5555555555543333555555443.5 PP
   S: 84   fsgyeqqDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldl 172
           f+     Da E+++ ll +++ ++                    de +e+  +  +++ ++ F ++l +q++c +c+ +s    pf+++
   Q: 113  FQLGIMDDAAECFENLLMRIHFHI-------------------ADETKEDICTAPHCVSHQKFAMTLFEQCVCTSCGATSDPL-PFIQM 181
           99**********************...................34556778999************************99766.9**** PP
   S: 173  slpvpgkeetkke.........slqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkk 252
              ++  + +++             d++ +  ++ +  g+ +   ++c +k +  +++ +++ P+++++ L +   s + +  e +  +
   Q: 182  VHYISTTSLCNQAicmlerrekPTPDMFGELLQNASTMGDLRNCPSNCGEKIR-IRRVLMNS-PQIITIGLVWD--SDHSDLAEDVIHS 266
           *****999998889999999998899999999999999999889999999985.66666655.**********9..3333454444444 PP
   S: 253  vefpleLdlsp..fctspeekqkekkkYeLiavvvHsGslssGHYvayvknekgk.WllfdDskVtev..keeevleetg...staYvl 333
           + +   L+l    f ++++   +++ +  L+++++++G     HY ++  ++k + W++fdD +V+e+  k+++v++++     ++ +l
   Q: 267  LGTC--LKLGDlfFRVTDD--RAKHSELYLVGMICYYG----KHYSTFFFQTKIRkWMYFDDAHVKEIgpKWKDVVTKCIkghYQPLLL 347
           4444..5555521333333..33345555*********....9*****99987767************766899988655555555566 PP
   S: 334  fY 335
           +Y
   Q: 348  LY 349
           66 PP

Organism

Gallus gallus

Protein Sequence
(Fasta)

MSWKRSYFSV GRGNVQGMFT PRSTTSIAPS KGLSNEPGQN SCFLNSALQV LWHLDIFRRS 60
FRQISTHKCM GDSCIFCALK GIFNQFQCSS EKVLPSDALR TALAKTFQDE QRFQLGIMDD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTTGGA AAAGAAGTTA CTTTTCTGTG GGCCGAGGGA ATGTCCAGGG GATGTTTACT 60
CCACGAAGTA CAACTTCGAT AGCACCCAGT AAAGGTCTCA GCAACGAACC AGGGCAGAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR028889--USP_dom

PROSITE

PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000820	Aegilops tauschii	30.45	1.00e-18	87.00
IUUC-Aml-001414	Ailuropoda melanoleuca	61.00	0.00e+00	1601.00
IUUC-Atr-002451	Amborella trichopoda	31.29	2.00e-39	158.00
IUUC-Apl-004044	Anas platyrhynchos	95.25	0.00e+00	1474.00
IUUC-Aca-004351	Anolis carolinensis	66.47	0.00e+00	1935.00
IUUC-Aly-005468	Arabidopsis lyrata	33.05	1.00e-43	172.00
IUUC-Ath-006682	Arabidopsis thaliana	32.20	1.00e-42	169.00
IUUC-Ame-011525	Astyanax mexicanus	62.07	0.00e+00	992.00
IUUC-Bta-013344	Bos taurus	61.40	0.00e+00	1596.00
IUUC-Bdi-015058	Brachypodium distachyon	33.43	6.00e-43	170.00
IUUC-Bol-015670	Brassica oleracea	31.20	1.00e-39	158.00
IUUC-Bra-016731	Brassica rapa	31.75	2.00e-42	168.00
IUUC-Cja-018724	Callithrix jacchus	60.58	0.00e+00	1586.00
IUUC-Cfa-021222	Canis familiaris	60.72	0.00e+00	1648.00
IUUC-Cpo-021795	Cavia porcellus	63.88	0.00e+00	1457.00
IUUC-Cre-022697	Chlamydomonas reinhardtii	24.16	3.00e-18	88.60
IUUC-Csa-023262	Chlorocebus sabaeus	59.99	0.00e+00	1600.00
IUUC-Cho-024422	Choloepus hoffmanni	61.65	0.00e+00	1385.00
IUUC-Cin-025752	Ciona intestinalis	67.77	1.00e-48	184.00
IUUC-Csv-026063	Ciona savignyi	54.88	4.00e-112	397.00
IUUC-Dre-028046	Danio rerio	62.76	0.00e+00	971.00
IUUC-Dno-029417	Dasypus novemcinctus	57.42	0.00e+00	1413.00
IUUC-Dme-032071	Drosophila melanogaster	52.91	2.00e-103	371.00
IUUC-Eca-033235	Equus caballus	64.12	0.00e+00	1522.00
IUUC-Fca-036070	Felis catus	60.58	0.00e+00	1615.00
IUUC-Fal-037089	Ficedula albicollis	87.71	0.00e+00	2806.00
IUUC-Gmo-038653	Gadus morhua	75.46	4.00e-176	610.00
IUUC-Gac-042157	Gasterosteus aculeatus	54.49	0.00e+00	813.00
IUUC-Gma-043273	Glycine max	31.41	3.00e-39	157.00
IUUC-Ggo-045626	Gorilla gorilla	59.94	0.00e+00	1601.00
IUUC-Hsa-045767	Homo sapiens	59.93	0.00e+00	1602.00
IUUC-Hvu-047657	Hordeum vulgare	32.84	9.00e-44	172.00
IUUC-Itr-048187	Ictidomys tridecemlineatus	94.24	0.00e+00	793.00
IUUC-Lch-049712	Latimeria chalumnae	88.37	0.00e+00	726.00
IUUC-Lpe-051572	Leersia perrieri	31.45	1.00e-39	159.00
IUUC-Loc-052615	Lepisosteus oculatus	65.99	0.00e+00	1021.00
IUUC-Laf-054578	Loxodonta africana	94.50	0.00e+00	796.00
IUUC-Mcc-054696	Macaca mulatta	59.71	0.00e+00	1595.00
IUUC-Mtr-058682	Medicago truncatula	28.77	2.00e-34	141.00
IUUC-Mga-059519	Meleagris gallopavo	80.58	0.00e+00	2394.00
IUUC-Mmr-060701	Microcebus murinus	59.76	0.00e+00	1541.00
IUUC-Mdo-062433	Monodelphis domestica	60.01	0.00e+00	1642.00
IUUC-Mmu-063480	Mus musculus	91.36	0.00e+00	772.00
IUUC-Mac-064469	Musa acuminata	31.89	2.00e-19	91.30
IUUC-Mpu-066404	Mustela putorius furo	60.93	0.00e+00	1639.00
IUUC-Mlu-067841	Myotis lucifugus	94.24	0.00e+00	793.00
IUUC-Nle-070110	Nomascus leucogenys	64.29	0.00e+00	1528.00
IUUC-Opr-070676	Ochotona princeps	70.94	0.00e+00	1065.00
IUUC-Ont-072289	Oreochromis niloticus	66.50	0.00e+00	733.00
IUUC-Oan-073551	Ornithorhynchus anatinus	66.73	0.00e+00	1721.00
IUUC-Ocu-074729	Oryctolagus cuniculus	60.39	0.00e+00	1600.00
IUUC-Oba-075174	Oryza barthii	30.41	7.00e-36	146.00
IUUC-Obr-076268	Oryza brachyantha	32.85	1.00e-44	175.00
IUUC-Ogl-077138	Oryza glaberrima	31.59	4.00e-41	164.00
IUUC-Ogu-078705	Oryza glumaepatula	30.41	7.00e-36	146.00
IUUC-Oin-079125	Oryza indica	31.59	4.00e-41	164.00
IUUC-Olo-080872	Oryza longistaminata	30.41	6.00e-36	146.00
IUUC-Ome-081864	Oryza meridionalis	29.43	1.00e-35	146.00
IUUC-Oni-082109	Oryza nivara	30.41	6.00e-36	146.00
IUUC-Opu-083823	Oryza punctata	31.88	2.00e-41	165.00
IUUC-Oru-084310	Oryza rufipogon	30.41	7.00e-36	146.00
IUUC-Osa-085583	Oryza sativa	31.96	3.00e-40	159.00
IUUC-Ola-086742	Oryzias latipes	80.43	0.00e+00	657.00
IUUC-Oga-088920	Otolemur garnettii	64.18	0.00e+00	1484.00
IUUC-Oar-089644	Ovis aries	60.64	0.00e+00	1586.00
IUUC-Ptr-091530	Pan troglodytes	64.36	0.00e+00	1530.00
IUUC-Pan-092190	Papio anubis	77.54	0.00e+00	1336.00
IUUC-Psi-094022	Pelodiscus sinensis	73.44	0.00e+00	2247.00
IUUC-Pma-094745	Petromyzon marinus	58.81	5.00e-134	470.00
IUUC-Pfo-096072	Poecilia formosa	79.01	0.00e+00	706.00
IUUC-Pab-097979	Pongo abelii	64.01	0.00e+00	1434.00
IUUC-Pop-099539	Populus trichocarpa	31.79	4.00e-37	150.00
IUUC-Pca-101005	Procavia capensis	50.90	0.00e+00	1185.00
IUUC-Ppe-101918	Prunus persica	30.90	2.00e-39	158.00
IUUC-Pva-103125	Pteropus vampyrus	60.23	0.00e+00	1597.00
IUUC-Rno-105463	Rattus norvegicus	56.25	0.00e+00	1442.00
IUUC-Sha-107164	Sarcophilus harrisii	61.22	0.00e+00	1534.00
IUUC-Sit-110021	Setaria italica	32.46	6.00e-39	156.00
IUUC-Sly-110975	Solanum lycopersicum	31.06	3.00e-40	161.00
IUUC-Stu-112904	Solanum tuberosum	31.42	5.00e-39	157.00
IUUC-Sbi-114345	Sorghum bicolor	33.04	2.00e-42	168.00
IUUC-Ssc-116206	Sus scrofa	58.76	0.00e+00	1541.00
IUUC-Tgu-116521	Taeniopygia guttata	98.69	0.00e+00	826.00
IUUC-Tru-118155	Takifugu rubripes	70.45	5.00e-174	603.00
IUUC-Tsy-118998	Tarsius syrichta	60.77	0.00e+00	1481.00
IUUC-Tni-120257	Tetraodon nigroviridis	80.10	0.00e+00	667.00
IUUC-Tca-121692	Theobroma cacao	31.87	3.00e-39	157.00
IUUC-Tae-125619	Triticum aestivum	32.94	1.00e-44	176.00
IUUC-Tur-126027	Triticum urartu	32.94	2.00e-44	175.00
IUUC-Ttr-128290	Tursiops truncatus	63.02	0.00e+00	1333.00
IUUC-Vpa-130213	Vicugna pacos	61.04	0.00e+00	1430.00
IUUC-Vvi-131652	Vitis vinifera	31.49	1.00e-39	159.00
IUUC-Xtr-131831	Xenopus tropicalis	55.63	0.00e+00	1555.00
IUUC-Xma-133409	Xiphophorus maculatus	59.26	0.00e+00	842.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence