iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
microRNA	RAID2
Protein-protein Interaction
IID	iRefIndex	PINA	Mentha
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.50e-28	95.3	315	350

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrtgvl 35
           H+++v+ +++  ++++++sG+dDg +++WDlr++ +
   Q: 315  HQSDVNVISWnrNEPFIASGGDDGYLHIWDLRQFQS 350
           9**********655*****************99865 PP

Organism

Drosophila melanogaster

Protein Sequence
(Fasta)

MDDGNENISM EVVEPEDAES DMSSDSGSDA EDDTAEPKAP KEVYLPGTKL ADDEELVCDE 60
SAYVMLHQAS TGAPCLSFDV IPDELGSGRQ SFPMTAYIVA GTQASRAHVN NLIVMKMSNL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACACTAAAAC TGAATTACTA TCAGCCACTC TTTATTTCAA AGCCGCACGT GCTAAATTTA 60
ACAGGCTAGT TTCGTGAATC CAAAGCCCAG TAGAAAGCTA TGGATGATGG AAATGAAAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

KEGG

dme:Dmel_CG12792

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000677	Aegilops tauschii	40.05	3.00e-73	268.00
IUUC-Aml-002309	Ailuropoda melanoleuca	53.47	6.00e-131	459.00
IUUC-Atr-002461	Amborella trichopoda	44.99	1.00e-94	339.00
IUUC-Aca-004760	Anolis carolinensis	56.51	3.00e-136	477.00
IUUC-Aly-005405	Arabidopsis lyrata	42.86	1.00e-90	326.00
IUUC-Ath-007178	Arabidopsis thaliana	42.73	3.00e-91	328.00
IUUC-Ago-007735	Ashbya gossypii	35.00	8.00e-70	256.00
IUUC-Acl-008294	Aspergillus clavatus	38.18	5.00e-76	277.00
IUUC-Afl-008486	Aspergillus flavus	36.99	2.00e-72	265.00
IUUC-Afu-009019	Aspergillus fumigatus	37.50	3.00e-76	278.00
IUUC-Ani-009465	Aspergillus nidulans	36.65	2.00e-73	269.00
IUUC-Ang-009641	Aspergillus niger	36.85	3.00e-72	265.00
IUUC-Ate-010426	Aspergillus terreus	37.50	9.00e-77	280.00
IUUC-Ame-010856	Astyanax mexicanus	52.96	5.00e-125	440.00
IUUC-Bgr-012258	Blumeria graminis	39.02	2.00e-64	238.00
IUUC-Bta-012437	Bos taurus	53.07	1.00e-128	451.00
IUUC-Bci-013647	Botrytis cinerea	38.88	3.00e-76	278.00
IUUC-Bdi-014728	Brachypodium distachyon	42.43	3.00e-91	328.00
IUUC-Bol-015126	Brassica oleracea	42.00	3.00e-89	321.00
IUUC-Bra-017677	Brassica rapa	45.41	9.00e-42	162.00
IUUC-Cel-018454	Caenorhabditis elegans	43.03	1.00e-102	365.00
IUUC-Cja-018859	Callithrix jacchus	53.33	3.00e-131	460.00
IUUC-Cfa-020912	Canis familiaris	53.49	1.00e-130	458.00
IUUC-Cpo-021368	Cavia porcellus	52.90	3.00e-130	457.00
IUUC-Cre-022850	Chlamydomonas reinhardtii	44.54	9.00e-50	190.00
IUUC-Csa-023599	Chlorocebus sabaeus	53.33	3.00e-131	461.00
IUUC-Cin-025718	Ciona intestinalis	57.01	2.00e-136	478.00
IUUC-Csv-025806	Ciona savignyi	58.69	2.00e-106	377.00
IUUC-Cgl-026766	Colletotrichum gloeosporioides	36.77	9.00e-61	226.00
IUUC-Cne-026781	Cryptococcus neoformans	43.51	5.00e-89	320.00
IUUC-Cme-027129	Cyanidioschyzon merolae	32.54	5.00e-48	184.00
IUUC-Dre-028225	Danio rerio	55.61	4.00e-130	457.00
IUUC-Dno-029792	Dasypus novemcinctus	52.87	5.00e-128	450.00
IUUC-Dor-030773	Dipodomys ordii	46.70	8.00e-55	206.00
IUUC-Dse-031289	Dothistroma septosporum	39.22	1.00e-72	266.00
IUUC-Eca-033618	Equus caballus	53.01	9.00e-129	452.00
IUUC-Fca-036102	Felis catus	54.15	1.00e-131	462.00
IUUC-Fox-037899	Fusarium oxysporum	39.62	5.00e-77	281.00
IUUC-Fso-038130	Fusarium solani	39.86	5.00e-76	277.00
IUUC-Gmo-038741	Gadus morhua	52.98	4.00e-124	437.00
IUUC-Ggr-040086	Gaeumannomyces graminis	38.32	5.00e-73	267.00
IUUC-Gac-042243	Gasterosteus aculeatus	52.27	3.00e-125	440.00
IUUC-Gma-044177	Glycine max	42.79	8.00e-89	320.00
IUUC-Ggo-044564	Gorilla gorilla	53.56	5.00e-132	463.00
IUUC-Hsa-046021	Homo sapiens	53.79	5.00e-132	463.00
IUUC-Hvu-047721	Hordeum vulgare	40.00	2.00e-84	305.00
IUUC-Itr-048189	Ictidomys tridecemlineatus	52.64	2.00e-130	457.00
IUUC-Kpa-049271	Komagataella pastoris	35.63	4.00e-67	248.00
IUUC-Lch-049974	Latimeria chalumnae	49.77	6.00e-122	430.00
IUUC-Lpe-051388	Leersia perrieri	38.26	3.00e-70	258.00
IUUC-Lma-053010	Leptosphaeria maculans	38.99	7.00e-75	273.00
IUUC-Laf-054058	Loxodonta africana	54.48	7.00e-132	462.00
IUUC-Mcc-055246	Macaca mulatta	53.56	3.00e-132	464.00
IUUC-Meu-056795	Macropus eugenii	54.61	6.00e-129	452.00
IUUC-Mor-057175	Magnaporthe oryzae	39.04	9.00e-74	270.00
IUUC-Mpo-057388	Magnaporthe poae	35.35	9.00e-59	220.00
IUUC-Mtr-057752	Medicago truncatula	41.80	5.00e-87	314.00
IUUC-Mla-058904	Melampsora laricipopulina	38.79	9.00e-77	280.00
IUUC-Mvi-060525	Microbotryum violaceum	40.77	4.00e-81	294.00
IUUC-Mmr-060905	Microcebus murinus	53.70	1.00e-130	459.00
IUUC-Mmu-063428	Mus musculus	52.42	6.00e-131	459.00
IUUC-Mac-065276	Musa acuminata	45.75	8.00e-88	316.00
IUUC-Mpu-066062	Mustela putorius furo	52.98	9.00e-132	462.00
IUUC-Mlu-068115	Myotis lucifugus	60.18	1.00e-78	285.00
IUUC-Nfi-068512	Neosartorya fischeri	37.50	7.00e-74	270.00
IUUC-Ncr-068629	Neurospora crassa	38.51	5.00e-73	267.00
IUUC-Nle-070016	Nomascus leucogenys	50.45	7.00e-124	436.00
IUUC-Ont-072230	Oreochromis niloticus	52.14	7.00e-125	439.00
IUUC-Oan-072759	Ornithorhynchus anatinus	32.27	5.00e-57	214.00
IUUC-Ocu-074511	Oryctolagus cuniculus	54.76	6.00e-126	443.00
IUUC-Oba-075093	Oryza barthii	40.37	2.00e-81	295.00
IUUC-Obr-076130	Oryza brachyantha	41.71	3.00e-89	321.00
IUUC-Ogl-077397	Oryza glaberrima	42.59	3.00e-90	324.00
IUUC-Ogu-078111	Oryza glumaepatula	39.85	1.00e-74	274.00
IUUC-Oin-079162	Oryza indica	40.28	1.00e-82	299.00
IUUC-Olo-080909	Oryza longistaminata	33.27	2.00e-63	236.00
IUUC-Ome-081768	Oryza meridionalis	40.59	9.00e-77	280.00
IUUC-Oni-082453	Oryza nivara	40.66	4.00e-80	292.00
IUUC-Opu-084133	Oryza punctata	39.20	3.00e-68	251.00
IUUC-Oru-085056	Oryza rufipogon	38.57	9.00e-61	226.00
IUUC-Osa-085735	Oryza sativa	42.36	2.00e-89	322.00
IUUC-Ola-087066	Oryzias latipes	53.68	2.00e-121	428.00
IUUC-Olu-087594	Ostreococcus lucimarinus	43.39	6.00e-84	303.00
IUUC-Oga-087974	Otolemur garnettii	52.41	4.00e-129	453.00
IUUC-Oar-089902	Ovis aries	53.40	3.00e-129	454.00
IUUC-Ptr-090469	Pan troglodytes	50.80	2.00e-123	434.00
IUUC-Pan-092858	Papio anubis	53.33	2.00e-131	461.00
IUUC-Psi-094092	Pelodiscus sinensis	45.43	2.00e-73	268.00
IUUC-Pno-094919	Phaeosphaeria nodorum	37.44	3.00e-67	248.00
IUUC-Ppa-095849	Physcomitrella patens	41.72	3.00e-94	338.00
IUUC-Pfo-096535	Poecilia formosa	53.37	5.00e-124	436.00
IUUC-Pab-098478	Pongo abelii	53.33	6.00e-132	462.00
IUUC-Pop-098902	Populus trichocarpa	42.99	1.00e-91	329.00
IUUC-Pca-100403	Procavia capensis	57.79	1.00e-98	351.00
IUUC-Ppe-101997	Prunus persica	43.58	3.00e-91	328.00
IUUC-Pva-102423	Pteropus vampyrus	53.70	3.00e-133	467.00
IUUC-Pgr-103339	Puccinia graminis	41.20	2.00e-83	302.00
IUUC-Ptt-103937	Puccinia triticina	40.76	1.00e-83	303.00
IUUC-Pte-104051	Pyrenophora teres	38.13	4.00e-73	268.00
IUUC-Pyt-104644	Pyrenophora triticirepentis	38.58	3.00e-73	268.00
IUUC-Rno-106118	Rattus norvegicus	52.85	1.00e-125	442.00
IUUC-Sce-106330	Saccharomyces cerevisiae	36.28	2.00e-67	248.00
IUUC-Sha-106564	Sarcophilus harrisii	49.87	4.00e-101	360.00
IUUC-Sja-107969	Schizosaccharomyces japonicus	41.65	1.00e-90	325.00
IUUC-Spo-108351	Schizosaccharomyces pombe	40.78	5.00e-87	314.00
IUUC-Ssl-108452	Sclerotinia sclerotiorum	40.28	1.00e-76	279.00
IUUC-Smo-109619	Selaginella moellendorffii	40.94	4.00e-91	327.00
IUUC-Sit-110719	Setaria italica	42.09	1.00e-86	312.00
IUUC-Sly-111245	Solanum lycopersicum	41.88	4.00e-85	307.00
IUUC-Stu-112645	Solanum tuberosum	42.82	7.00e-92	330.00
IUUC-Sar-113342	Sorex araneus	53.20	3.00e-117	414.00
IUUC-Sbi-114359	Sorghum bicolor	42.40	2.00e-87	315.00
IUUC-Sre-115098	Sporisorium reilianum	41.57	3.00e-80	291.00
IUUC-Ssc-115496	Sus scrofa	53.10	4.00e-131	460.00
IUUC-Tru-117662	Takifugu rubripes	54.42	3.00e-126	444.00
IUUC-Tni-120564	Tetraodon nigroviridis	53.09	5.00e-103	366.00
IUUC-Tca-121710	Theobroma cacao	42.76	1.00e-90	325.00
IUUC-Tre-122239	Trichoderma reesei	38.92	3.00e-77	281.00
IUUC-Tvi-122589	Trichoderma virens	38.68	6.00e-77	280.00
IUUC-Tae-125574	Triticum aestivum	43.69	4.00e-88	317.00
IUUC-Tur-126135	Triticum urartu	42.54	4.00e-71	261.00
IUUC-Tme-127073	Tuber melanosporum	38.52	5.00e-68	251.00
IUUC-Ttr-128383	Tursiops truncatus	52.41	2.00e-128	451.00
IUUC-Uma-129345	Ustilago maydis	42.34	3.00e-85	308.00
IUUC-Vda-129893	Verticillium dahliae	40.05	5.00e-76	277.00
IUUC-Vvi-131067	Vitis vinifera	44.47	5.00e-94	337.00
IUUC-Xtr-132603	Xenopus tropicalis	58.29	1.00e-139	488.00
IUUC-Xma-133149	Xiphophorus maculatus	53.33	2.00e-125	441.00
IUUC-Yli-134459	Yarrowia lipolytica	38.46	1.00e-73	269.00
IUUC-Zma-135548	Zea mays	42.09	7.00e-87	313.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence