iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Nle-069171

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ADFV01046301

Gene Name

USP39

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSNLEG00000002008.2	ENSNLET00000002639.2	ENSNLEP00000002507.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	8.00e-52	176.5	173	503

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelw..kskkkavsprellkalkkeaee.fsg 86
           +Gl+N+ +  Y N+vLQ+Lsn+p+lr+++le+++ k  ++ p +    l++ + +l+++lw   + k +vsp+e+l+a+  ++++ f+ 
   Q: 173  VGLNNIKANDYANAVLQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWnpRNFKAHVSPHEMLQAVVLCSKKtFQI 261
           6*********************************9999***********************999999**************99999*** PP
   S: 87   yeqqDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlk................sqikclec 159
           ++q D  +fl+++l++l+++l                          +kkk+k++++d+Fqg+++                +q+  ++ 
   Q: 262  TKQGDGVDFLSWFLNALHSAL------------------------GGTKKKKKTIVTDVFQGSMRiftkklphpdlpaeekEQLLHNDE 326
           *********************........................4578888889999999999888899999999998889******* PP
   S: 160  dnvssreepfldlslpvpgkeetkke.........slqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsf 239
            +++  e++f++l+l++p     k e          l ++L++f    e e    y++ k     +  k+++l+klP++Li+ +kRf  
   Q: 327  YQETMVESTFMYLTLDLPTAPLYKDEkeqliipqvPLFNILAKFNGITEKE----YKTYK----ENFLKRFQLTKLPPYLIFCIKRF-- 405
           ******************877776664455566666666666666666655....44333....3489*******************.. PP
   S: 240  seeqksrekinkkvefple.LdlspfctspeekqkekkkYeLiavvvHsGslssGHYvayvkn.ekgkWllfdDskVtevkeeevleet 326
           ++++ + ek+ + v+fp++ +dl+++++++ ++++++++Y+Lia +vH G++s+G Y  +v +  +gkW+++ D +Vt +  + +    
   Q: 406  TKNNFFVEKNPTIVNFPITnVDLREYLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHhGTGKWYELQDLQVTDILPQMITL-- 492
           88889********************************************************9935666******************9.. PP
   S: 327  gstaYvlfYkrr 338
            s+aY+ ++krr
   Q: 493  -SEAYIQIWKRR 503
           .********985 PP

Organism

Nomascus leucogenys

Protein Sequence
(Fasta)

MAGGASLRRR TFCSLHWPTL ALSIGFPFSK PVMIFPSAKN GRVDSEDRRS RHCPYLDTIN 60
RSVLDFDFEK LCSISLSHIN AYACLVCGKY FQGRGLKSHA YIHSVQFSHH VFLNLHTLKF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGCGGTGTC CCAACTTCGG AGGACCTGGG CGCGGAGGGC TGTGGCGTGA AGACCGCTCT 60
AAAACCGAGA TGCCTAGAGG TTCCGTTTAA CCGGTTCCTA CGGGGGAAGC GTCAGCAGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001394--Peptidase_C19_UCH
IPR033809--USP39
IPR028889--USP_dom
IPR013083--Znf_RING/FYVE/PHD
IPR001607--Znf_UBP

PROSITE

PS50235--USP_3
PS50271--ZF_UBP

Pfam

PF00443--UCH
PF02148--zf-UBP

SMART

SM00290--ZnF_UBP

Gene Ontology

GO:0005654--C:nucleoplasm
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0008270--F:zinc ion binding
GO:0016579--P:protein deubiquitination
GO:0000245--P:spliceosomal complex assembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000483	Aegilops tauschii	52.93	7.00e-128	450.00
IUUC-Aml-001846	Ailuropoda melanoleuca	99.58	0.00e+00	969.00
IUUC-Atr-002758	Amborella trichopoda	51.28	4.00e-128	451.00
IUUC-Apl-003336	Anas platyrhynchos	91.62	5.00e-175	607.00
IUUC-Aca-004846	Anolis carolinensis	97.36	0.00e+00	898.00
IUUC-Aly-005683	Arabidopsis lyrata	50.98	1.00e-116	413.00
IUUC-Ath-007661	Arabidopsis thaliana	50.33	1.00e-115	410.00
IUUC-Ago-007802	Ashbya gossypii	31.01	5.00e-59	221.00
IUUC-Acl-008304	Aspergillus clavatus	41.43	1.00e-90	327.00
IUUC-Afl-008735	Aspergillus flavus	58.12	2.00e-40	159.00
IUUC-Afu-009100	Aspergillus fumigatus	40.48	2.00e-88	320.00
IUUC-Ani-009138	Aspergillus nidulans	42.18	5.00e-93	335.00
IUUC-Ang-009661	Aspergillus niger	44.61	4.00e-94	338.00
IUUC-Aor-010235	Aspergillus oryzae	38.37	4.00e-78	285.00
IUUC-Ate-010346	Aspergillus terreus	36.33	1.00e-70	260.00
IUUC-Ame-011688	Astyanax mexicanus	89.25	0.00e+00	838.00
IUUC-Bgr-011998	Blumeria graminis	47.60	9.00e-115	407.00
IUUC-Bta-013407	Bos taurus	100.00	0.00e+00	974.00
IUUC-Bci-013977	Botrytis cinerea	49.13	1.00e-114	406.00
IUUC-Bdi-014361	Brachypodium distachyon	53.13	3.00e-134	472.00
IUUC-Bol-016317	Brassica oleracea	50.44	7.00e-115	407.00
IUUC-Bra-017952	Brassica rapa	50.88	4.00e-116	411.00
IUUC-Cel-018491	Caenorhabditis elegans	62.39	1.00e-176	613.00
IUUC-Cja-019134	Callithrix jacchus	100.00	0.00e+00	975.00
IUUC-Cfa-020098	Canis familiaris	100.00	0.00e+00	974.00
IUUC-Cpo-021595	Cavia porcellus	99.58	0.00e+00	967.00
IUUC-Cre-022886	Chlamydomonas reinhardtii	50.81	2.00e-31	127.00
IUUC-Csa-024121	Chlorocebus sabaeus	100.00	0.00e+00	974.00
IUUC-Cho-025057	Choloepus hoffmanni	77.34	1.00e-85	310.00
IUUC-Cin-025473	Ciona intestinalis	62.96	3.00e-64	237.00
IUUC-Csv-025815	Ciona savignyi	81.62	2.00e-116	412.00
IUUC-Cgl-026416	Colletotrichum gloeosporioides	44.71	3.00e-108	385.00
IUUC-Cne-026802	Cryptococcus neoformans	43.17	2.00e-99	356.00
IUUC-Dre-027870	Danio rerio	88.87	0.00e+00	832.00
IUUC-Dno-029655	Dasypus novemcinctus	99.37	0.00e+00	967.00
IUUC-Dor-030762	Dipodomys ordii	100.00	0.00e+00	972.00
IUUC-Dse-031441	Dothistroma septosporum	45.81	3.00e-107	382.00
IUUC-Dme-032101	Drosophila melanogaster	64.71	1.00e-178	619.00
IUUC-Ete-032841	Echinops telfairi	93.91	0.00e+00	923.00
IUUC-Eca-033463	Equus caballus	100.00	0.00e+00	973.00
IUUC-Eeu-034438	Erinaceus europaeus	71.22	0.00e+00	661.00
IUUC-Fca-035774	Felis catus	100.00	0.00e+00	974.00
IUUC-Fal-036988	Ficedula albicollis	92.68	0.00e+00	910.00
IUUC-Fox-037895	Fusarium oxysporum	45.57	1.00e-104	373.00
IUUC-Fso-038450	Fusarium solani	46.87	6.00e-106	377.00
IUUC-Gmo-038874	Gadus morhua	87.69	0.00e+00	818.00
IUUC-Ggr-040115	Gaeumannomyces graminis	44.82	7.00e-103	367.00
IUUC-Gac-041650	Gasterosteus aculeatus	85.71	0.00e+00	844.00
IUUC-Gma-043697	Glycine max	50.85	1.00e-127	450.00
IUUC-Ggo-044707	Gorilla gorilla	92.65	0.00e+00	887.00
IUUC-Hsa-046041	Homo sapiens	100.00	0.00e+00	973.00
IUUC-Hvu-047816	Hordeum vulgare	50.00	3.00e-121	429.00
IUUC-Itr-048945	Ictidomys tridecemlineatus	99.71	0.00e+00	684.00
IUUC-Lch-050419	Latimeria chalumnae	92.26	0.00e+00	892.00
IUUC-Lpe-051593	Leersia perrieri	53.70	6.00e-134	471.00
IUUC-Loc-052930	Lepisosteus oculatus	88.82	0.00e+00	845.00
IUUC-Lma-053256	Leptosphaeria maculans	47.62	2.00e-112	399.00
IUUC-Laf-053555	Loxodonta africana	99.58	0.00e+00	965.00
IUUC-Mcc-055630	Macaca mulatta	100.00	0.00e+00	974.00
IUUC-Meu-056579	Macropus eugenii	95.06	1.00e-179	622.00
IUUC-Mor-057078	Magnaporthe oryzae	42.44	1.00e-103	370.00
IUUC-Mpo-057607	Magnaporthe poae	37.86	3.00e-84	306.00
IUUC-Mtr-058644	Medicago truncatula	51.07	7.00e-127	447.00
IUUC-Mla-059120	Melampsora laricipopulina	41.13	1.00e-99	357.00
IUUC-Mvi-060429	Microbotryum violaceum	46.33	1.00e-67	250.00
IUUC-Mmr-061313	Microcebus murinus	99.79	0.00e+00	970.00
IUUC-Mdo-062801	Monodelphis domestica	98.94	0.00e+00	961.00
IUUC-Mmu-064424	Mus musculus	99.79	0.00e+00	993.00
IUUC-Mac-064694	Musa acuminata	50.96	1.00e-129	456.00
IUUC-Mpu-065980	Mustela putorius furo	100.00	0.00e+00	853.00
IUUC-Mlu-067007	Myotis lucifugus	99.79	0.00e+00	967.00
IUUC-Nfi-068274	Neosartorya fischeri	40.48	1.00e-88	320.00
IUUC-Ncr-068829	Neurospora crassa	46.88	1.00e-105	377.00
IUUC-Opr-070494	Ochotona princeps	91.81	0.00e+00	873.00
IUUC-Ont-072290	Oreochromis niloticus	87.71	0.00e+00	862.00
IUUC-Oan-073099	Ornithorhynchus anatinus	97.48	0.00e+00	950.00
IUUC-Ocu-074642	Oryctolagus cuniculus	100.00	0.00e+00	972.00
IUUC-Oba-075886	Oryza barthii	53.04	3.00e-133	468.00
IUUC-Obr-076220	Oryza brachyantha	53.04	1.00e-133	469.00
IUUC-Ogl-077682	Oryza glaberrima	53.04	1.00e-133	470.00
IUUC-Ogu-078492	Oryza glumaepatula	52.83	2.00e-133	469.00
IUUC-Oin-079956	Oryza indica	53.04	1.00e-133	469.00
IUUC-Olo-080239	Oryza longistaminata	46.61	3.00e-105	377.00
IUUC-Ome-081573	Oryza meridionalis	53.04	6.00e-134	471.00
IUUC-Oni-082975	Oryza nivara	53.04	1.00e-133	469.00
IUUC-Opu-083724	Oryza punctata	53.26	1.00e-133	469.00
IUUC-Oru-084566	Oryza rufipogon	53.04	1.00e-133	469.00
IUUC-Osa-086008	Oryza sativa	53.04	9.00e-134	470.00
IUUC-Ola-086967	Oryzias latipes	89.40	0.00e+00	844.00
IUUC-Olu-087614	Ostreococcus lucimarinus	43.91	5.00e-97	347.00
IUUC-Oga-088047	Otolemur garnettii	80.88	3.00e-175	607.00
IUUC-Oar-089393	Ovis aries	100.00	0.00e+00	974.00
IUUC-Ptr-090561	Pan troglodytes	100.00	0.00e+00	973.00
IUUC-Pan-091812	Papio anubis	100.00	0.00e+00	975.00
IUUC-Psi-093507	Pelodiscus sinensis	99.32	9.00e-171	592.00
IUUC-Pno-095104	Phaeosphaeria nodorum	46.92	4.00e-110	392.00
IUUC-Ppa-095995	Physcomitrella patens	52.32	2.00e-133	469.00
IUUC-Pfo-096754	Poecilia formosa	89.01	0.00e+00	857.00
IUUC-Pab-098053	Pongo abelii	100.00	0.00e+00	973.00
IUUC-Pop-099230	Populus trichocarpa	50.83	2.00e-132	465.00
IUUC-Pca-100407	Procavia capensis	90.97	0.00e+00	868.00
IUUC-Ppe-101699	Prunus persica	52.39	6.00e-128	451.00
IUUC-Pva-103159	Pteropus vampyrus	97.27	0.00e+00	925.00
IUUC-Pgr-103433	Puccinia graminis	42.62	7.00e-103	368.00
IUUC-Ptt-103701	Puccinia triticina	39.44	5.00e-91	328.00
IUUC-Pte-104281	Pyrenophora teres	47.61	4.00e-112	398.00
IUUC-Pyt-104714	Pyrenophora triticirepentis	47.61	4.00e-112	398.00
IUUC-Rno-105531	Rattus norvegicus	99.58	0.00e+00	993.00
IUUC-Sce-106368	Saccharomyces cerevisiae	29.68	6.00e-46	178.00
IUUC-Sha-107093	Sarcophilus harrisii	98.94	0.00e+00	956.00
IUUC-Sja-108004	Schizosaccharomyces japonicus	43.87	7.00e-113	400.00
IUUC-Spo-108018	Schizosaccharomyces pombe	47.38	4.00e-112	398.00
IUUC-Ssl-108460	Sclerotinia sclerotiorum	46.65	3.00e-106	379.00
IUUC-Smo-108892	Selaginella moellendorffii	52.37	7.00e-132	463.00
IUUC-Sit-110782	Setaria italica	54.19	7.00e-136	477.00
IUUC-Sly-111308	Solanum lycopersicum	52.42	2.00e-136	479.00
IUUC-Stu-112447	Solanum tuberosum	51.90	1.00e-136	479.00
IUUC-Sar-113352	Sorex araneus	93.10	0.00e+00	782.00
IUUC-Sbi-114806	Sorghum bicolor	54.74	4.00e-135	474.00
IUUC-Sre-115059	Sporisorium reilianum	54.22	1.00e-71	263.00
IUUC-Ssc-115677	Sus scrofa	98.53	0.00e+00	679.00
IUUC-Tru-118478	Takifugu rubripes	86.76	0.00e+00	856.00
IUUC-Tsy-119082	Tarsius syrichta	86.67	0.00e+00	732.00
IUUC-Tni-120419	Tetraodon nigroviridis	86.37	0.00e+00	835.00
IUUC-Tca-121294	Theobroma cacao	50.31	7.00e-134	470.00
IUUC-Tre-121962	Trichoderma reesei	44.65	8.00e-102	363.00
IUUC-Tvi-122280	Trichoderma virens	44.33	4.00e-109	388.00
IUUC-Tae-125873	Triticum aestivum	54.00	4.00e-134	471.00
IUUC-Tur-126551	Triticum urartu	54.00	7.00e-134	470.00
IUUC-Tme-126959	Tuber melanosporum	47.40	2.00e-112	399.00
IUUC-Tbe-127737	Tupaia belangeri	100.00	0.00e+00	920.00
IUUC-Ttr-129211	Tursiops truncatus	99.59	1.00e-147	516.00
IUUC-Uma-129591	Ustilago maydis	39.54	3.00e-95	342.00
IUUC-Vda-129674	Verticillium dahliae	44.30	7.00e-95	341.00
IUUC-Vpa-130793	Vicugna pacos	92.26	0.00e+00	848.00
IUUC-Xtr-132430	Xenopus tropicalis	91.30	0.00e+00	887.00
IUUC-Xma-133515	Xiphophorus maculatus	88.86	0.00e+00	846.00
IUUC-Yli-134488	Yarrowia lipolytica	38.19	2.00e-79	289.00
IUUC-Zma-134748	Zea mays	54.51	1.00e-135	476.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence