iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000037406.6	ENSDART00000131257.2	ENSDARP00000114539.1
ENSDARG00000037406.6	ENSDART00000135905.1	ENSDARP00000113684.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.70e-08	33.1	274	306

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtg 33
           H+ds t++a  ++ +  +s++ D+ ik+ Dl++ 
   Q: 274  HKDSLTSIAIsQSlNKAASCG-DNCIKIHDLTDL 306
           9*********87789977776.99******9986 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MKRVFTLSEK SWSGSCLQYK WQKTVGNYLA VAGPDNLVKI FDRHGQKVNE LNLPGNCVSL 60
DWDKDGDILA VIAEKSSSVY LWDANVNKTS QLDSGMRDQM SFLLWSKTGP LLAVGTSKGN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGTCGGCGT GAAGCACACT GGGAAGTGTA ACGTTTTCCA TAAACAAAAA TGAAGGCAAG 60
TGTGTTATTA TTTTACTAGT CTACCTAGCG TCCTATTACT TTTCAACTGA ATATCGCTAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005929--C:cilium
GO:0060271--P:cilium assembly

KEGG

dre:556414

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cel-018591	Caenorhabditis elegans	40.43	0.00e+00	1053.00
IUUC-Cpo-021608	Cavia porcellus	76.49	0.00e+00	2164.00
IUUC-Dme-031961	Drosophila melanogaster	41.67	0.00e+00	1088.00
IUUC-Gmo-039202	Gadus morhua	81.42	0.00e+00	1060.00
IUUC-Gac-041476	Gasterosteus aculeatus	71.68	0.00e+00	2081.00
IUUC-Lch-049609	Latimeria chalumnae	82.25	0.00e+00	740.00
IUUC-Loc-052919	Lepisosteus oculatus	82.44	0.00e+00	2366.00
IUUC-Mcc-055460	Macaca mulatta	21.22	5.00e-06	48.10
IUUC-Mga-060030	Meleagris gallopavo	75.32	0.00e+00	2180.00
IUUC-Mpu-066840	Mustela putorius furo	77.74	0.00e+00	2169.00
IUUC-Nle-069497	Nomascus leucogenys	21.54	2.00e-05	46.20
IUUC-Oan-073422	Ornithorhynchus anatinus	67.98	0.00e+00	706.00
IUUC-Ocu-073906	Oryctolagus cuniculus	76.45	0.00e+00	2174.00
IUUC-Ola-086596	Oryzias latipes	72.02	0.00e+00	2037.00
IUUC-Rno-105208	Rattus norvegicus	77.27	0.00e+00	2183.00
IUUC-Sha-107068	Sarcophilus harrisii	75.82	0.00e+00	2152.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence