iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Gma-042929

Ensembl Protein ID

GLYMA01G45490.1

UniProt Accession

I1JB00; I1JB00_SOYBN

Genbank Protein ID

KRH77949.1

Protein Name

DNA repair protein REV1

Genbank Nucleotide ID

CM000834

Gene Name

REV1; LOC100778409; GLYMA_01G243900

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA01G45490	GLYMA01G45490.1	GLYMA01G45490.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/UBM	29.89	7.00e-46	181.00	IUUC-Sce-106236

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Glycine max

Functional Description
(View)

Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template-dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents.

Protein Sequence
(Fasta)

MSLDSSRSGN SKRSFSNSIS SNDYIKKKKK KKTTPNQKTL GAAWGSKSNS RKPAFSDFAS 60
YMTEKNRKLH NQFEAQASTS SLTLSASLFS GVSIFVDGFT IPSNQELRSY MLKYGGRFEN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TAAAAGGTGG TTTTAAGTTG AAAAAAATAA AAAGCATGAG ACAACTTTGA CTTGTTATTA 60
GTTTGGTTCT TGTAGAAACA GTGCTGGTTC AAATTCAAAC AATCTTGGTG GATACACACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0227--DNA damage
KW-0234--DNA repair
KW-0237--DNA synthesis
KW-0238--DNA-binding
KW-0548--Nucleotidyltransferase
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR001357--BRCT_dom
IPR017961--DNA_pol_Y-fam_little_finger
IPR012112--REV1
IPR001126--UmuC

PROSITE

PS50172--BRCT
PS50173--UMUC

Pfam

PF16589--BRCT_2
PF00817--IMS
PF11799--IMS_C

SMART

SM00292--BRCT

Gene Ontology

GO:0005634--C:nucleus
GO:0003684--F:damaged DNA binding
GO:0003887--F:DNA-directed DNA polymerase activity
GO:0042276--P:error-prone translesion synthesis
GO:0010224--P:response to UV-B

KEGG

gmx:100778409

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000375	Aegilops tauschii	37.96	3.00e-96	346.00
IUUC-Aml-001185	Ailuropoda melanoleuca	37.16	2.00e-88	321.00
IUUC-Atr-002915	Amborella trichopoda	45.54	0.00e+00	681.00
IUUC-Apl-004054	Anas platyrhynchos	31.79	5.00e-85	309.00
IUUC-Aca-004304	Anolis carolinensis	32.50	3.00e-114	406.00
IUUC-Aly-005696	Arabidopsis lyrata	51.86	0.00e+00	975.00
IUUC-Ath-006893	Arabidopsis thaliana	52.06	0.00e+00	977.00
IUUC-Ago-007722	Ashbya gossypii	30.93	4.00e-51	196.00
IUUC-Acl-008347	Aspergillus clavatus	31.82	8.00e-97	348.00
IUUC-Afl-008444	Aspergillus flavus	34.55	1.00e-75	278.00
IUUC-Afu-008837	Aspergillus fumigatus	30.71	3.00e-96	347.00
IUUC-Ani-009188	Aspergillus nidulans	34.40	8.00e-77	282.00
IUUC-Ang-009866	Aspergillus niger	31.79	3.00e-97	350.00
IUUC-Aor-010107	Aspergillus oryzae	34.55	9.00e-76	278.00
IUUC-Ate-010359	Aspergillus terreus	35.42	2.00e-81	297.00
IUUC-Ame-010664	Astyanax mexicanus	32.47	3.00e-83	303.00
IUUC-Bgr-012244	Blumeria graminis	32.96	2.00e-94	340.00
IUUC-Bta-013405	Bos taurus	36.16	8.00e-80	292.00
IUUC-Bci-013849	Botrytis cinerea	36.89	2.00e-77	285.00
IUUC-Bdi-014066	Brachypodium distachyon	44.82	0.00e+00	825.00
IUUC-Bol-015544	Brassica oleracea	50.46	0.00e+00	976.00
IUUC-Bra-017792	Brassica rapa	49.31	0.00e+00	964.00
IUUC-Cel-018148	Caenorhabditis elegans	32.55	2.00e-61	231.00
IUUC-Cja-019742	Callithrix jacchus	32.37	6.00e-52	199.00
IUUC-Cfa-020112	Canis familiaris	37.01	1.00e-88	321.00
IUUC-Cpo-022152	Cavia porcellus	36.76	2.00e-86	314.00
IUUC-Cre-022951	Chlamydomonas reinhardtii	39.37	9.00e-67	248.00
IUUC-Csa-023504	Chlorocebus sabaeus	32.53	2.00e-109	390.00
IUUC-Cho-024780	Choloepus hoffmanni	42.06	5.00e-21	97.10
IUUC-Cin-025276	Ciona intestinalis	39.50	4.00e-89	322.00
IUUC-Csv-026283	Ciona savignyi	34.76	7.00e-72	265.00
IUUC-Cgl-026726	Colletotrichum gloeosporioides	36.05	2.00e-83	304.00
IUUC-Cne-027079	Cryptococcus neoformans	29.29	3.00e-76	280.00
IUUC-Cme-027346	Cyanidioschyzon merolae	29.51	7.00e-66	245.00
IUUC-Dre-028073	Danio rerio	36.53	2.00e-84	307.00
IUUC-Dno-030038	Dasypus novemcinctus	31.32	6.00e-115	409.00
IUUC-Dor-031100	Dipodomys ordii	32.04	2.00e-77	284.00
IUUC-Dse-031310	Dothistroma septosporum	28.38	1.00e-91	331.00
IUUC-Dme-031991	Drosophila melanogaster	35.79	4.00e-80	293.00
IUUC-Ete-033082	Echinops telfairi	32.56	5.00e-67	249.00
IUUC-Eca-033471	Equus caballus	37.11	5.00e-88	319.00
IUUC-Eeu-034993	Erinaceus europaeus	42.95	3.00e-70	260.00
IUUC-Fca-035367	Felis catus	33.22	2.00e-88	321.00
IUUC-Fal-036973	Ficedula albicollis	36.85	8.00e-83	302.00
IUUC-Fox-037677	Fusarium oxysporum	33.91	4.00e-77	283.00
IUUC-Fso-038252	Fusarium solani	29.93	7.00e-91	329.00
IUUC-Gmo-039669	Gadus morhua	37.63	2.00e-87	318.00
IUUC-Ggr-039988	Gaeumannomyces graminis	33.62	1.00e-78	288.00
IUUC-Gga-040423	Gallus gallus	32.32	6.00e-85	309.00
IUUC-Gac-042134	Gasterosteus aculeatus	37.61	7.00e-84	305.00
IUUC-Ggo-044528	Gorilla gorilla	33.06	6.00e-85	309.00
IUUC-Hsa-046259	Homo sapiens	33.61	4.00e-85	310.00
IUUC-Hvu-047139	Hordeum vulgare	65.42	5.00e-115	407.00
IUUC-Itr-048621	Ictidomys tridecemlineatus	30.58	3.00e-114	406.00
IUUC-Kpa-049169	Komagataella pastoris	31.72	1.00e-60	228.00
IUUC-Lch-050471	Latimeria chalumnae	40.66	8.00e-73	269.00
IUUC-Lpe-050800	Leersia perrieri	46.63	0.00e+00	858.00
IUUC-Loc-052320	Lepisosteus oculatus	28.02	7.00e-45	176.00
IUUC-Lma-053149	Leptosphaeria maculans	27.14	2.00e-82	300.00
IUUC-Laf-053810	Loxodonta africana	37.42	5.00e-82	299.00
IUUC-Mcc-055574	Macaca mulatta	32.49	3.00e-109	390.00
IUUC-Meu-055945	Macropus eugenii	30.55	1.00e-31	132.00
IUUC-Mor-057195	Magnaporthe oryzae	28.48	9.00e-98	352.00
IUUC-Mpo-057488	Magnaporthe poae	30.54	3.00e-94	340.00
IUUC-Mtr-057955	Medicago truncatula	72.79	0.00e+00	1577.00
IUUC-Mla-059027	Melampsora laricipopulina	36.99	1.00e-65	244.00
IUUC-Mga-060156	Meleagris gallopavo	32.21	1.00e-83	305.00
IUUC-Mvi-060398	Microbotryum violaceum	35.28	1.00e-73	272.00
IUUC-Mmr-061113	Microcebus murinus	36.85	8.00e-83	302.00
IUUC-Mdo-063001	Monodelphis domestica	32.53	6.00e-85	309.00
IUUC-Mmu-063180	Mus musculus	36.36	2.00e-82	300.00
IUUC-Mac-065551	Musa acuminata	42.55	2.00e-140	493.00
IUUC-Mpu-066525	Mustela putorius furo	36.67	2.00e-87	317.00
IUUC-Mlu-067877	Myotis lucifugus	32.03	5.00e-83	303.00
IUUC-Nfi-068418	Neosartorya fischeri	31.10	4.00e-96	346.00
IUUC-Ncr-068648	Neurospora crassa	32.04	2.00e-93	338.00
IUUC-Nle-069959	Nomascus leucogenys	32.46	7.00e-110	392.00
IUUC-Opr-070522	Ochotona princeps	45.59	4.00e-50	194.00
IUUC-Ont-072293	Oreochromis niloticus	32.63	3.00e-74	274.00
IUUC-Oan-073519	Ornithorhynchus anatinus	34.82	2.00e-84	307.00
IUUC-Ocu-074492	Oryctolagus cuniculus	38.02	2.00e-84	307.00
IUUC-Oba-075567	Oryza barthii	46.08	0.00e+00	866.00
IUUC-Obr-076332	Oryza brachyantha	45.13	0.00e+00	806.00
IUUC-Ogl-077348	Oryza glaberrima	46.04	0.00e+00	899.00
IUUC-Ogu-078779	Oryza glumaepatula	45.80	0.00e+00	861.00
IUUC-Oin-079738	Oryza indica	42.73	0.00e+00	812.00
IUUC-Olo-080701	Oryza longistaminata	42.67	0.00e+00	806.00
IUUC-Ome-081708	Oryza meridionalis	44.38	0.00e+00	796.00
IUUC-Oni-082251	Oryza nivara	45.71	0.00e+00	857.00
IUUC-Opu-083528	Oryza punctata	44.64	0.00e+00	850.00
IUUC-Oru-084293	Oryza rufipogon	45.04	0.00e+00	845.00
IUUC-Osa-085549	Oryza sativa	45.86	0.00e+00	896.00
IUUC-Ola-086793	Oryzias latipes	32.69	4.00e-81	296.00
IUUC-Olu-087786	Ostreococcus lucimarinus	35.18	3.00e-71	263.00
IUUC-Oga-089006	Otolemur garnettii	35.38	7.00e-78	286.00
IUUC-Oar-089597	Ovis aries	36.78	4.00e-86	313.00
IUUC-Ptr-091520	Pan troglodytes	37.21	7.00e-85	309.00
IUUC-Pan-092333	Papio anubis	37.21	6.00e-84	306.00
IUUC-Psi-094004	Pelodiscus sinensis	41.69	5.00e-69	256.00
IUUC-Pma-094128	Petromyzon marinus	35.57	2.00e-47	184.00
IUUC-Pno-094849	Phaeosphaeria nodorum	30.11	1.00e-76	281.00
IUUC-Ppa-095714	Physcomitrella patens	46.82	6.00e-150	525.00
IUUC-Pfo-096569	Poecilia formosa	35.45	2.00e-78	287.00
IUUC-Pab-097960	Pongo abelii	37.34	1.00e-84	308.00
IUUC-Pop-098921	Populus trichocarpa	52.53	0.00e+00	1083.00
IUUC-Pca-100509	Procavia capensis	33.41	1.00e-55	212.00
IUUC-Ppe-101730	Prunus persica	56.41	0.00e+00	1141.00
IUUC-Pva-102142	Pteropus vampyrus	36.65	4.00e-82	300.00
IUUC-Pgr-103446	Puccinia graminis	31.92	4.00e-51	196.00
IUUC-Ptt-103849	Puccinia triticina	28.81	2.00e-69	258.00
IUUC-Pte-104128	Pyrenophora teres	31.12	1.00e-95	344.00
IUUC-Pyt-104754	Pyrenophora triticirepentis	29.63	2.00e-98	353.00
IUUC-Rno-104871	Rattus norvegicus	30.63	2.00e-111	397.00
IUUC-Sce-106236	Saccharomyces cerevisiae	30.37	2.00e-46	181.00
IUUC-Sha-106962	Sarcophilus harrisii	32.50	2.00e-85	311.00
IUUC-Sja-107691	Schizosaccharomyces japonicus	32.81	8.00e-74	272.00
IUUC-Spo-108170	Schizosaccharomyces pombe	37.59	5.00e-63	236.00
IUUC-Ssl-108668	Sclerotinia sclerotiorum	35.94	5.00e-83	303.00
IUUC-Smo-109554	Selaginella moellendorffii	40.88	3.00e-178	619.00
IUUC-Sit-110479	Setaria italica	44.35	0.00e+00	653.00
IUUC-Sly-111752	Solanum lycopersicum	51.91	0.00e+00	1049.00
IUUC-Sar-113304	Sorex araneus	36.80	1.00e-84	308.00
IUUC-Sbi-114196	Sorghum bicolor	51.24	4.00e-150	525.00
IUUC-Sre-115151	Sporisorium reilianum	29.98	2.00e-68	254.00
IUUC-Ssc-116104	Sus scrofa	35.78	1.00e-81	298.00
IUUC-Tgu-117438	Taeniopygia guttata	33.18	3.00e-84	307.00
IUUC-Tru-118553	Takifugu rubripes	42.18	4.00e-72	266.00
IUUC-Tsy-119056	Tarsius syrichta	34.46	3.00e-86	313.00
IUUC-Tni-119933	Tetraodon nigroviridis	32.97	2.00e-109	390.00
IUUC-Tca-121376	Theobroma cacao	54.28	0.00e+00	1185.00
IUUC-Tre-121972	Trichoderma reesei	31.18	3.00e-85	310.00
IUUC-Tvi-122342	Trichoderma virens	30.86	6.00e-88	319.00
IUUC-Tae-123898	Triticum aestivum	48.89	0.00e+00	768.00
IUUC-Tur-126735	Triticum urartu	40.45	2.00e-107	384.00
IUUC-Tme-126999	Tuber melanosporum	35.68	3.00e-76	281.00
IUUC-Tbe-127280	Tupaia belangeri	46.97	8.00e-29	123.00
IUUC-Ttr-129104	Tursiops truncatus	36.90	2.00e-82	300.00
IUUC-Uma-129562	Ustilago maydis	32.37	5.00e-67	250.00
IUUC-Vda-129862	Verticillium dahliae	30.46	4.00e-91	329.00
IUUC-Vpa-130819	Vicugna pacos	36.48	5.00e-45	176.00
IUUC-Vvi-131111	Vitis vinifera	55.66	0.00e+00	1162.00
IUUC-Xtr-132629	Xenopus tropicalis	34.90	1.00e-76	281.00
IUUC-Xma-134065	Xiphophorus maculatus	36.31	2.00e-82	301.00
IUUC-Yli-134633	Yarrowia lipolytica	31.90	4.00e-57	216.00
IUUC-Zma-135176	Zea mays	47.78	0.00e+00	802.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence