iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
microRNA	RAID2
Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.00e-16	58.9	325	361

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrtgvll 36
           H + v++l+f   ++l++sGsdD ti vWD+ + ++l
   Q: 325  HHGCVNSLNFnrAGDLICSGSDDLTIVVWDWAKEKQL 361
           6677******86339***************9888776 PP

Organism

Drosophila melanogaster

Protein Sequence
(Fasta)

MDVEDSVASG AASACKRQKR NTDSQNDGEP EDAAQIGEEN TVAESQPLIN FDTIVTHNNN 60
GESDMEGKEN QLQDESEQSE EHLANKVGPE ELPEIEQAGS SNLAHQLSPE AASTVLASDE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCTCGTGTGG GAGGGAAGTC ACTGATCGTA TTTAAAGGCT GAAGCCACAC ATCTTAGGCG 60
TAAGCAGGAT TATACTCCAT CCACAGACTT TCAAACTGGC CGATAAGTCG CGCCAAAGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000985	Aegilops tauschii	37.05	3.00e-66	244.00
IUUC-Aml-001810	Ailuropoda melanoleuca	41.58	1.00e-80	293.00
IUUC-Atr-002578	Amborella trichopoda	40.05	3.00e-69	255.00
IUUC-Apl-003872	Anas platyrhynchos	54.02	1.00e-26	113.00
IUUC-Aca-004853	Anolis carolinensis	41.99	7.00e-74	271.00
IUUC-Aly-005872	Arabidopsis lyrata	38.46	1.00e-54	206.00
IUUC-Ath-006619	Arabidopsis thaliana	38.97	1.00e-61	229.00
IUUC-Ame-011615	Astyanax mexicanus	42.01	4.00e-84	305.00
IUUC-Bta-013549	Bos taurus	41.85	7.00e-81	293.00
IUUC-Bdi-014212	Brachypodium distachyon	34.13	2.00e-54	206.00
IUUC-Bol-015797	Brassica oleracea	37.82	2.00e-64	239.00
IUUC-Bra-017142	Brassica rapa	38.28	7.00e-65	240.00
IUUC-Cja-018802	Callithrix jacchus	40.87	5.00e-81	294.00
IUUC-Cfa-020535	Canis familiaris	41.58	2.00e-80	292.00
IUUC-Cpo-022216	Cavia porcellus	41.85	9.00e-81	293.00
IUUC-Cre-022883	Chlamydomonas reinhardtii	52.81	2.00e-25	110.00
IUUC-Csa-023095	Chlorocebus sabaeus	41.85	1.00e-80	293.00
IUUC-Cin-025683	Ciona intestinalis	45.61	2.00e-80	292.00
IUUC-Csv-026331	Ciona savignyi	42.55	8.00e-73	266.00
IUUC-Cme-027316	Cyanidioschyzon merolae	44.33	9.00e-23	102.00
IUUC-Dre-027731	Danio rerio	41.64	1.00e-80	293.00
IUUC-Dno-029192	Dasypus novemcinctus	41.58	2.00e-80	292.00
IUUC-Dse-031250	Dothistroma septosporum	50.57	5.00e-24	106.00
IUUC-Ete-032932	Echinops telfairi	37.54	1.00e-66	246.00
IUUC-Eca-034100	Equus caballus	41.85	1.00e-80	293.00
IUUC-Fca-036122	Felis catus	38.28	7.00e-80	290.00
IUUC-Gmo-038895	Gadus morhua	43.03	6.00e-81	293.00
IUUC-Gga-040447	Gallus gallus	42.58	1.00e-74	273.00
IUUC-Gac-041796	Gasterosteus aculeatus	42.22	2.00e-82	298.00
IUUC-Gma-044124	Glycine max	40.75	3.00e-68	251.00
IUUC-Ggo-045613	Gorilla gorilla	41.85	1.00e-80	293.00
IUUC-Hsa-046377	Homo sapiens	41.85	1.00e-80	293.00
IUUC-Hvu-047687	Hordeum vulgare	41.03	2.00e-68	251.00
IUUC-Itr-048849	Ictidomys tridecemlineatus	39.65	8.00e-75	273.00
IUUC-Lch-050050	Latimeria chalumnae	29.91	4.00e-50	191.00
IUUC-Lpe-051191	Leersia perrieri	37.57	9.00e-66	243.00
IUUC-Lma-053032	Leptosphaeria maculans	45.24	1.00e-20	95.10
IUUC-Laf-053407	Loxodonta africana	42.46	2.00e-80	292.00
IUUC-Mcc-055604	Macaca mulatta	41.85	8.00e-81	294.00
IUUC-Meu-056043	Macropus eugenii	41.58	2.00e-73	269.00
IUUC-Mtr-057813	Medicago truncatula	38.87	2.00e-67	248.00
IUUC-Mga-059697	Meleagris gallopavo	33.48	6.00e-25	107.00
IUUC-Mmr-061338	Microcebus murinus	41.85	8.00e-81	294.00
IUUC-Mdo-062689	Monodelphis domestica	41.85	1.00e-72	266.00
IUUC-Mmu-063993	Mus musculus	41.85	5.00e-81	294.00
IUUC-Mac-064558	Musa acuminata	39.02	2.00e-68	251.00
IUUC-Mpu-066622	Mustela putorius furo	41.58	5.00e-81	294.00
IUUC-Mlu-067235	Myotis lucifugus	42.12	3.00e-80	292.00
IUUC-Nle-069048	Nomascus leucogenys	41.85	2.00e-80	292.00
IUUC-Opr-070489	Ochotona princeps	32.87	3.00e-39	155.00
IUUC-Ont-072060	Oreochromis niloticus	42.22	7.00e-82	297.00
IUUC-Ocu-074684	Oryctolagus cuniculus	41.58	1.00e-80	293.00
IUUC-Oba-075746	Oryza barthii	39.20	8.00e-67	246.00
IUUC-Obr-076629	Oryza brachyantha	37.97	3.00e-67	248.00
IUUC-Ogl-077243	Oryza glaberrima	37.89	2.00e-67	248.00
IUUC-Ogu-078029	Oryza glumaepatula	37.89	5.00e-67	248.00
IUUC-Oin-080109	Oryza indica	33.33	2.00e-56	212.00
IUUC-Olo-080308	Oryza longistaminata	36.60	9.00e-64	236.00
IUUC-Ome-081126	Oryza meridionalis	37.23	4.00e-64	238.00
IUUC-Oni-083114	Oryza nivara	37.89	4.00e-67	248.00
IUUC-Opu-083288	Oryza punctata	37.77	2.00e-66	245.00
IUUC-Oru-084724	Oryza rufipogon	37.89	4.00e-67	248.00
IUUC-Osa-085895	Oryza sativa	37.89	2.00e-67	248.00
IUUC-Olu-087847	Ostreococcus lucimarinus	26.54	2.00e-24	105.00
IUUC-Oga-088849	Otolemur garnettii	41.85	1.00e-80	293.00
IUUC-Oar-089474	Ovis aries	40.43	2.00e-70	258.00
IUUC-Ptr-091235	Pan troglodytes	41.85	9.00e-81	293.00
IUUC-Pan-092895	Papio anubis	41.85	1.00e-80	293.00
IUUC-Psi-093973	Pelodiscus sinensis	38.82	3.00e-81	295.00
IUUC-Ppa-095529	Physcomitrella patens	40.20	3.00e-69	254.00
IUUC-Pfo-097275	Poecilia formosa	42.22	1.00e-82	300.00
IUUC-Pab-098299	Pongo abelii	41.85	2.00e-80	292.00
IUUC-Pop-100080	Populus trichocarpa	36.57	6.00e-65	240.00
IUUC-Pca-100729	Procavia capensis	40.00	1.00e-71	263.00
IUUC-Ppe-101712	Prunus persica	36.79	5.00e-63	234.00
IUUC-Pva-103030	Pteropus vampyrus	41.85	1.00e-80	293.00
IUUC-Pyt-104546	Pyrenophora triticirepentis	45.24	7.00e-21	95.50
IUUC-Rno-105416	Rattus norvegicus	41.85	1.00e-80	293.00
IUUC-Sha-106545	Sarcophilus harrisii	41.85	6.00e-72	265.00
IUUC-Smo-109128	Selaginella moellendorffii	38.73	3.00e-66	244.00
IUUC-Sit-110823	Setaria italica	40.62	1.00e-70	259.00
IUUC-Sly-111605	Solanum lycopersicum	36.60	1.00e-65	242.00
IUUC-Stu-111978	Solanum tuberosum	40.47	1.00e-69	256.00
IUUC-Sbi-114455	Sorghum bicolor	40.91	1.00e-69	256.00
IUUC-Ssc-115612	Sus scrofa	38.77	7.00e-81	293.00
IUUC-Tru-117708	Takifugu rubripes	41.53	1.00e-81	296.00
IUUC-Tsy-119579	Tarsius syrichta	38.32	1.00e-67	249.00
IUUC-Tni-120739	Tetraodon nigroviridis	41.46	2.00e-81	295.00
IUUC-Tca-121555	Theobroma cacao	36.09	4.00e-61	228.00
IUUC-Tae-125509	Triticum aestivum	39.39	6.00e-69	254.00
IUUC-Tur-126381	Triticum urartu	36.52	1.00e-59	223.00
IUUC-Tbe-128115	Tupaia belangeri	40.80	7.00e-70	257.00
IUUC-Ttr-128231	Tursiops truncatus	38.32	3.00e-69	255.00
IUUC-Vvi-131034	Vitis vinifera	38.12	8.00e-64	236.00
IUUC-Xtr-131860	Xenopus tropicalis	37.24	8.00e-64	237.00
IUUC-Xma-133371	Xiphophorus maculatus	42.22	3.00e-82	298.00
IUUC-Zma-135609	Zea mays	38.95	1.00e-66	246.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence