iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Psi-093866

Ensembl Protein ID

ENSPSIP00000005376.1

UniProt Accession

K7FBG6; K7FBG6_PELSI

Genbank Protein ID

ENSPSIP00000005376

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGCU01040635

Gene Name

THOC6

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPSIG00000005010.1	ENSPSIT00000005407.1	ENSPSIP00000005376.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.80e-16	58.3	153	191

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH+d v+cla+ +     +sGs Dgt+++WDlrtg +++
   Q: 153  GHSDYVHCLALrDQyQECLSGSEDGTVRMWDLRTGAQVQ 191
           8**********644688******************9876 PP

Organism

Pelodiscus sinensis

Protein Sequence
(Fasta)

MDIQRALELL HMTVFSQSVS PCGKYLAAGN NYGEIAVFSL SAALSSEAKE ESKKPVVSFT 60
AHDGPVYAMV STERQLLSAG NGEVKAWNWS DIVKKGCKEA WSRRPPYRSS LEVPEINSLQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGGGTCATG CCAAGCCTAC GGGTTCCCAG AATGCATTGG GGCGGGTCAT GCCAAGCCTA 60
CGGGTTCCCA GAATGCATTG GGGCGGGTCA TGCCAACTCA GGGAGCTCCC AGAATGCTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0000784--C:nuclear chromosome, telomeric region
GO:0016607--C:nuclear speck
GO:0000445--C:THO complex part of transcription export complex
GO:0007417--P:central nervous system development
GO:0043066--P:negative regulation of apoptotic process
GO:0046784--P:viral mRNA export from host cell nucleus

KEGG

pss:102446335

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001101	Aegilops tauschii	30.04	3.00e-31	128.00
IUUC-Aml-001693	Ailuropoda melanoleuca	70.96	7.00e-118	416.00
IUUC-Atr-002699	Amborella trichopoda	29.21	1.00e-27	116.00
IUUC-Aca-004231	Anolis carolinensis	88.04	5.00e-154	536.00
IUUC-Aly-006385	Arabidopsis lyrata	29.54	2.00e-35	142.00
IUUC-Ath-006723	Arabidopsis thaliana	29.85	2.00e-34	139.00
IUUC-Ame-010813	Astyanax mexicanus	63.72	6.00e-87	313.00
IUUC-Bta-013458	Bos taurus	70.63	5.00e-118	416.00
IUUC-Bdi-014935	Brachypodium distachyon	29.70	1.00e-30	127.00
IUUC-Bol-015442	Brassica oleracea	29.97	3.00e-34	139.00
IUUC-Bra-017807	Brassica rapa	30.60	7.00e-34	137.00
IUUC-Cja-019061	Callithrix jacchus	70.30	3.00e-116	411.00
IUUC-Cfa-021146	Canis familiaris	71.29	2.00e-119	421.00
IUUC-Cpo-022512	Cavia porcellus	71.52	1.00e-119	422.00
IUUC-Csa-023055	Chlorocebus sabaeus	69.87	2.00e-117	415.00
IUUC-Cho-024693	Choloepus hoffmanni	72.68	2.00e-76	278.00
IUUC-Cin-025181	Ciona intestinalis	36.18	2.00e-58	218.00
IUUC-Csv-025852	Ciona savignyi	35.27	2.00e-49	188.00
IUUC-Dre-028221	Danio rerio	61.02	5.00e-118	417.00
IUUC-Dno-029200	Dasypus novemcinctus	69.19	9.00e-67	245.00
IUUC-Dor-030863	Dipodomys ordii	70.86	4.00e-118	417.00
IUUC-Dme-032016	Drosophila melanogaster	31.65	1.00e-38	153.00
IUUC-Eca-034363	Equus caballus	70.96	7.00e-119	419.00
IUUC-Fca-036546	Felis catus	70.96	1.00e-118	418.00
IUUC-Gmo-038513	Gadus morhua	58.99	5.00e-101	360.00
IUUC-Gac-042606	Gasterosteus aculeatus	60.00	2.00e-113	401.00
IUUC-Gma-042881	Glycine max	28.47	6.00e-34	137.00
IUUC-Ggo-044877	Gorilla gorilla	70.86	3.00e-118	417.00
IUUC-Hsa-045813	Homo sapiens	70.20	4.00e-118	417.00
IUUC-Hvu-047782	Hordeum vulgare	32.91	1.00e-21	95.90
IUUC-Itr-047876	Ictidomys tridecemlineatus	71.19	7.00e-119	419.00
IUUC-Lch-049506	Latimeria chalumnae	77.08	8.00e-139	486.00
IUUC-Lpe-051203	Leersia perrieri	32.20	1.00e-29	123.00
IUUC-Loc-052451	Lepisosteus oculatus	54.24	2.00e-91	328.00
IUUC-Laf-053864	Loxodonta africana	70.96	2.00e-118	417.00
IUUC-Mcc-055705	Macaca mulatta	64.17	5.00e-100	357.00
IUUC-Meu-055926	Macropus eugenii	76.24	5.00e-121	426.00
IUUC-Mtr-058556	Medicago truncatula	27.78	4.00e-34	138.00
IUUC-Mmr-060836	Microcebus murinus	69.87	2.00e-117	414.00
IUUC-Mdo-062534	Monodelphis domestica	74.26	1.00e-117	415.00
IUUC-Mmu-063560	Mus musculus	69.93	5.00e-117	413.00
IUUC-Mac-065134	Musa acuminata	29.46	2.00e-31	129.00
IUUC-Mpu-066031	Mustela putorius furo	70.63	9.00e-119	419.00
IUUC-Mlu-068051	Myotis lucifugus	68.65	9.00e-114	402.00
IUUC-Nle-069080	Nomascus leucogenys	70.20	1.00e-117	416.00
IUUC-Opr-070787	Ochotona princeps	69.05	3.00e-110	391.00
IUUC-Ont-071952	Oreochromis niloticus	59.66	2.00e-108	385.00
IUUC-Oan-073334	Ornithorhynchus anatinus	76.83	3.00e-104	370.00
IUUC-Oba-075175	Oryza barthii	32.20	2.00e-29	123.00
IUUC-Obr-076393	Oryza brachyantha	32.20	4.00e-29	122.00
IUUC-Ogl-077603	Oryza glaberrima	35.34	4.00e-20	91.30
IUUC-Ogu-078211	Oryza glumaepatula	32.20	2.00e-29	123.00
IUUC-Oin-079554	Oryza indica	32.20	1.00e-29	123.00
IUUC-Olo-080922	Oryza longistaminata	31.09	2.00e-23	102.00
IUUC-Ome-081127	Oryza meridionalis	25.98	1.00e-15	77.40
IUUC-Oni-082376	Oryza nivara	32.20	1.00e-29	123.00
IUUC-Opu-083163	Oryza punctata	31.71	4.00e-29	121.00
IUUC-Oru-084311	Oryza rufipogon	32.20	2.00e-29	122.00
IUUC-Osa-085762	Oryza sativa	35.34	6.00e-20	90.90
IUUC-Oga-088804	Otolemur garnettii	71.19	1.00e-119	422.00
IUUC-Oar-090095	Ovis aries	70.30	2.00e-117	415.00
IUUC-Ptr-090731	Pan troglodytes	70.53	4.00e-118	417.00
IUUC-Pan-092595	Papio anubis	70.63	1.00e-116	412.00
IUUC-Pma-094236	Petromyzon marinus	65.10	9.00e-118	416.00
IUUC-Pfo-096095	Poecilia formosa	60.00	5.00e-110	390.00
IUUC-Pab-098385	Pongo abelii	71.19	2.00e-118	418.00
IUUC-Pop-099433	Populus trichocarpa	26.10	5.00e-31	128.00
IUUC-Pca-101119	Procavia capensis	65.98	2.00e-72	265.00
IUUC-Ppe-101677	Prunus persica	27.71	2.00e-31	129.00
IUUC-Pva-102726	Pteropus vampyrus	71.29	5.00e-120	423.00
IUUC-Rno-105576	Rattus norvegicus	69.93	2.00e-117	415.00
IUUC-Sha-106774	Sarcophilus harrisii	75.25	5.00e-120	423.00
IUUC-Sit-109988	Setaria italica	29.00	2.00e-31	129.00
IUUC-Sly-110864	Solanum lycopersicum	27.57	4.00e-27	115.00
IUUC-Sar-113060	Sorex araneus	68.88	3.00e-98	350.00
IUUC-Sbi-114699	Sorghum bicolor	30.71	5.00e-33	134.00
IUUC-Ssc-116445	Sus scrofa	70.30	2.00e-118	418.00
IUUC-Tru-117834	Takifugu rubripes	58.64	2.00e-112	398.00
IUUC-Tni-119651	Tetraodon nigroviridis	57.97	1.00e-111	395.00
IUUC-Tca-121318	Theobroma cacao	27.52	1.00e-29	123.00
IUUC-Tae-124184	Triticum aestivum	30.04	3.00e-31	128.00
IUUC-Tur-126226	Triticum urartu	32.68	3.00e-29	122.00
IUUC-Tbe-128079	Tupaia belangeri	57.44	2.00e-65	241.00
IUUC-Ttr-128391	Tursiops truncatus	66.45	9.00e-108	382.00
IUUC-Vvi-131148	Vitis vinifera	28.96	1.00e-29	124.00
IUUC-Xtr-132743	Xenopus tropicalis	70.00	7.00e-121	426.00
IUUC-Xma-133722	Xiphophorus maculatus	60.34	6.00e-115	406.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence