iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016897

Ensembl Protein ID

Bra003806.1-P

UniProt Accession

M4CHX3; M4CHX3_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra003806	Bra003806.1	Bra003806.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.40e-06	29.0	59	115

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkw........pglknssskefrCPlCr 46
           C+iC+e+f   ++ p+vl CgH++++dCl ++         g +     + +CP+C+
   Q: 59   CPICWEPFnvfENVPYVLWCGHTICKDCLLALhravviksSGFPFHLPFFVTCPWCN 115
           ******99999889***************6665555554422233333444799996 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MSVNKRVEEQ SHHHFVMWNL TSKSNEEGFK SKGEDAVTEP LKAPLDDGRK TRKEERLECP 60
ICWEPFNVFE NVPYVLWCGH TICKDCLLAL HRAVVIKSSG FPFHLPFFVT CPWCNMLSLR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGCGTTA ACAAACGGTG CGTTTTGTGG TGAATCCAGC GGCGTCAGAT TTAAGGTGTG 60
GAAATCTGTT GCGGCCGTAA ACTTCGAAAG GCGTTTCCGT GTCACCGTGT CTTACTACGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR027370--Znf-RING_LisH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13445--zf-RING_UBOX

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006116	Arabidopsis lyrata	72.80	8.00e-106	375.00
IUUC-Ath-007510	Arabidopsis thaliana	73.85	5.00e-108	383.00
IUUC-Bol-015127	Brassica oleracea	73.90	6.00e-97	346.00
IUUC-Dre-028035	Danio rerio	50.00	2.00e-06	48.10
IUUC-Dme-031708	Drosophila melanogaster	51.43	6.00e-05	42.70
IUUC-Eeu-035091	Erinaceus europaeus	41.51	1.00e-05	45.40
IUUC-Loc-052316	Lepisosteus oculatus	36.78	3.00e-07	50.10
IUUC-Ola-087424	Oryzias latipes	40.91	2.00e-06	46.60
IUUC-Pfo-097469	Poecilia formosa	50.00	5.00e-06	47.00
IUUC-Smo-109392	Selaginella moellendorffii	38.18	3.00e-30	124.00
IUUC-Tru-118270	Takifugu rubripes	52.63	6.00e-07	49.70
IUUC-Xtr-132274	Xenopus tropicalis	41.51	1.00e-05	45.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence