iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cfa-020679

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAEX03005203

Gene Name

RC3H1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCAFG00000014434.3	ENSCAFT00000022951.3	ENSCAFP00000021318.3

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	96.82	0.00e+00	1959.00	IUUC-Hsa-046163

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Canis familiaris

Protein Sequence
(Fasta)

MPVQAPQWTD FLSCPICTQT FDETIRKPIS LGCGHTVCKM CLNKLHRKAC PFDQTTINTD 60
IELLPVNSAL LQLVGAQVPE QQPITLCSGV EDTKHYEEAK KCVEELALYL KPLSSARGVG 120

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Nucleotide Sequence
(Fasta)

GTTATATTTC ACACTATGTG CTGACTGTAT CTACAGAAGA TATTTAAAAA AAAAAAAAAA 60
CTTTTTTCAA AGATTTTGAT TCCAGTGGAA TCTTTGCTTT AGATTATTTT GTGTGTGTGT 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR032671--RC3H1
IPR027370--Znf-RING_LisH
IPR000571--Znf_CCCH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50103--ZF_C3H1
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00642--zf-CCCH
PF13445--zf-RING_UBOX

SMART

SM00184--RING
SM00356--ZnF_C3H1

Gene Ontology

GO:0010494--C:cytoplasmic stress granule
GO:0000932--C:P-body
GO:0003730--F:mRNA 3'-UTR binding
GO:0035613--F:RNA stem-loop binding
GO:0008270--F:zinc ion binding
GO:0061158--P:3'-UTR-mediated mRNA destabilization
GO:0001782--P:B cell homeostasis
GO:0071347--P:cellular response to interleukin-1
GO:0033962--P:cytoplasmic mRNA processing body assembly
GO:0048535--P:lymph node development
GO:0046007--P:negative regulation of activated T cell proliferation
GO:0030889--P:negative regulation of B cell proliferation
GO:0002635--P:negative regulation of germinal center formation
GO:0045623--P:negative regulation of T-helper cell differentiation
GO:0000288--P:nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0061014--P:positive regulation of mRNA catabolic process
GO:1901224--P:positive regulation of NIK/NF-kappaB signaling
GO:0050856--P:regulation of T cell receptor signaling pathway
GO:0048536--P:spleen development
GO:0043029--P:T cell homeostasis
GO:0042098--P:T cell proliferation
GO:0061470--P:T follicular helper cell differentiation

KEGG

cfa:480065

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001700	Ailuropoda melanoleuca	98.67	0.00e+00	1986.00
IUUC-Apl-003290	Anas platyrhynchos	86.72	0.00e+00	1836.00
IUUC-Aca-004905	Anolis carolinensis	84.78	0.00e+00	1723.00
IUUC-Ame-011475	Astyanax mexicanus	77.89	0.00e+00	919.00
IUUC-Bta-012366	Bos taurus	52.28	0.00e+00	939.00
IUUC-Cel-018474	Caenorhabditis elegans	38.60	3.00e-07	51.20
IUUC-Cja-019907	Callithrix jacchus	96.56	0.00e+00	1994.00
IUUC-Cpo-022110	Cavia porcellus	91.63	0.00e+00	1939.00
IUUC-Csa-024166	Chlorocebus sabaeus	96.96	0.00e+00	1925.00
IUUC-Cho-024281	Choloepus hoffmanni	69.53	5.00e-164	572.00
IUUC-Dre-028035	Danio rerio	49.80	0.00e+00	770.00
IUUC-Dno-029870	Dasypus novemcinctus	95.34	0.00e+00	979.00
IUUC-Dor-030934	Dipodomys ordii	87.34	0.00e+00	1492.00
IUUC-Dme-031708	Drosophila melanogaster	64.51	8.00e-163	567.00
IUUC-Ete-032652	Echinops telfairi	96.29	0.00e+00	1394.00
IUUC-Eca-033236	Equus caballus	96.29	0.00e+00	1924.00
IUUC-Eeu-035091	Erinaceus europaeus	82.93	0.00e+00	874.00
IUUC-Fca-035773	Felis catus	97.35	0.00e+00	1961.00
IUUC-Fal-036972	Ficedula albicollis	85.65	0.00e+00	1819.00
IUUC-Gmo-039303	Gadus morhua	79.90	0.00e+00	890.00
IUUC-Gga-040314	Gallus gallus	50.30	0.00e+00	918.00
IUUC-Ggo-044691	Gorilla gorilla	90.43	0.00e+00	1833.00
IUUC-Hsa-046163	Homo sapiens	96.73	0.00e+00	2000.00
IUUC-Itr-048266	Ictidomys tridecemlineatus	93.40	0.00e+00	1041.00
IUUC-Lch-050667	Latimeria chalumnae	74.48	0.00e+00	1524.00
IUUC-Loc-052404	Lepisosteus oculatus	69.02	0.00e+00	1333.00
IUUC-Laf-053618	Loxodonta africana	96.99	0.00e+00	1897.00
IUUC-Mcc-054692	Macaca mulatta	96.73	0.00e+00	2005.00
IUUC-Meu-056025	Macropus eugenii	84.03	0.00e+00	920.00
IUUC-Mga-060133	Meleagris gallopavo	50.21	0.00e+00	912.00
IUUC-Mmr-061188	Microcebus murinus	96.91	0.00e+00	1949.00
IUUC-Mdo-063035	Monodelphis domestica	91.36	0.00e+00	1875.00
IUUC-Mmu-064146	Mus musculus	92.76	0.00e+00	1910.00
IUUC-Mpu-066217	Mustela putorius furo	97.61	0.00e+00	1960.00
IUUC-Mlu-068023	Myotis lucifugus	95.58	0.00e+00	1949.00
IUUC-Nle-069506	Nomascus leucogenys	96.65	0.00e+00	2002.00
IUUC-Opr-070587	Ochotona princeps	82.65	0.00e+00	1591.00
IUUC-Ont-071278	Oreochromis niloticus	78.00	0.00e+00	890.00
IUUC-Oan-073500	Ornithorhynchus anatinus	90.92	0.00e+00	1917.00
IUUC-Ocu-074299	Oryctolagus cuniculus	96.24	0.00e+00	1842.00
IUUC-Ola-086665	Oryzias latipes	60.42	0.00e+00	1198.00
IUUC-Oga-088519	Otolemur garnettii	89.68	0.00e+00	1738.00
IUUC-Oar-089246	Ovis aries	96.14	0.00e+00	1838.00
IUUC-Ptr-091102	Pan troglodytes	96.82	0.00e+00	2003.00
IUUC-Pan-091952	Papio anubis	96.65	0.00e+00	2002.00
IUUC-Psi-093944	Pelodiscus sinensis	50.69	0.00e+00	924.00
IUUC-Pfo-097227	Poecilia formosa	61.24	0.00e+00	1155.00
IUUC-Pab-097975	Pongo abelii	93.47	0.00e+00	1907.00
IUUC-Pca-101127	Procavia capensis	91.76	0.00e+00	1313.00
IUUC-Pva-102431	Pteropus vampyrus	87.99	0.00e+00	1736.00
IUUC-Rno-105194	Rattus norvegicus	53.60	0.00e+00	938.00
IUUC-Sha-106690	Sarcophilus harrisii	90.57	0.00e+00	1865.00
IUUC-Sar-112923	Sorex araneus	52.81	0.00e+00	940.00
IUUC-Ssc-116189	Sus scrofa	96.91	0.00e+00	1894.00
IUUC-Tgu-116527	Taeniopygia guttata	86.64	0.00e+00	1833.00
IUUC-Tru-118389	Takifugu rubripes	62.05	0.00e+00	1204.00
IUUC-Tsy-119193	Tarsius syrichta	93.64	0.00e+00	1892.00
IUUC-Tni-119790	Tetraodon nigroviridis	64.15	0.00e+00	1110.00
IUUC-Tbe-127445	Tupaia belangeri	91.02	0.00e+00	1536.00
IUUC-Ttr-128877	Tursiops truncatus	96.39	0.00e+00	1895.00
IUUC-Vpa-130204	Vicugna pacos	53.02	0.00e+00	952.00
IUUC-Xtr-132274	Xenopus tropicalis	77.74	0.00e+00	1576.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence