iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cin-025106

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

EAAA01002889

Gene Name

LOC100187252

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCING00000001299.3	ENSCINT00000002527.3	ENSCINP00000002527.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-43	145.1	391	428
UBD/Beta-Prp	2.60e-64	217.1	271	506

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gH  ++++++f ++   +++Gs D+t+k+WDlr+  ++
   Q: 391  GHLKEMYAVCFsPNgYQIATGSADNTVKIWDLRKTSCV 428
           79999*******77688***************998887 PP

UBD/Beta-Prp

   S: 56   tavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvv 144
           +++++++++  l+++s+ + +k+w+l++ + v  l+ghe +v  ++++psg +l+++  d+  r+wdle+ q++   ++gh++ v  ++
   Q: 271  ATTQLDNSAACLASCSTGGEVKLWNLESDESVADLNGHEMRVARVAYHPSGRFLATTCYDKSWRLWDLESTQEVL-HQEGHSKGVHDIS 358
           5788999999*****************************************************************.************* PP
   S: 145  vhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfs.p 232
           ++ dg+l+v+G+lD   r+Wdl+tg++++  +g h +  y + f++ng ++++gs d+tvk+wdl++++cv+t  +ht+ v++++   +
   Q: 359  FQIDGSLCVTGGLDAYGRVWDLRTGRCIYFIEG-HLKEMYAVCFSPNGYQIATGSADNTVKIWDLRKTSCVYTIPAHTNLVSRLQYQkS 446
           *******************************99.****************************************************999 PP
   S: 233  nderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsfgdnvlvlgsedskvniwk 293
           ++++lv+gs Dg+ +iW +    +lktl++h+ +v++v++ s+++  +++ s+d ++++w+
   Q: 447  DGNYLVTGSYDGTAKIWGYPAYVPLKTLAGHEGKVMCVDG-SPDGEFIATSSFDRTFKLWA 506
           ****************************************.*******************7 PP

Organism

Ciona intestinalis

Protein Sequence
(Fasta)

MSDAENEGGE NAEVATEEKP LSAQYGSLEG KVGSKQEAID MGIKAGNINI SDPSETMEMT 60
MEERINKRQA EILAEFERKK KIRQIQVTTD DDEIKKLLRE RNLPVTLFGE GPADRRERLR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTAAGTGTTA AAAATAGAAA ATCAATTCTG CATAATGTCT GACGCTGAAA ATGAAGGTGG 60
TGAAAATGCT GAGGTCGCAA CAGAAGAAAA ACCACTTTCA GCGCAATATG GAAGTTTGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR014906--PRP4-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08799--PRP4
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00500--SFM
SM00320--WD40

Gene Ontology

GO:0046540--C:U4/U6 x U5 tri-snRNP complex
GO:0030621--F:U4 snRNA binding
GO:0017070--F:U6 snRNA binding
GO:0000398--P:mRNA splicing, via spliceosome

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000771	Aegilops tauschii	41.40	2.00e-91	327.00
IUUC-Aml-001737	Ailuropoda melanoleuca	58.61	9.00e-178	615.00
IUUC-Atr-002828	Amborella trichopoda	40.43	3.00e-97	347.00
IUUC-Apl-003723	Anas platyrhynchos	58.50	8.00e-177	612.00
IUUC-Aca-004972	Anolis carolinensis	59.83	7.00e-177	612.00
IUUC-Aly-006531	Arabidopsis lyrata	38.55	2.00e-82	298.00
IUUC-Ath-007367	Arabidopsis thaliana	38.44	6.00e-95	340.00
IUUC-Ago-007893	Ashbya gossypii	33.26	8.00e-50	189.00
IUUC-Acl-008236	Aspergillus clavatus	35.16	1.00e-84	305.00
IUUC-Afl-008522	Aspergillus flavus	36.79	2.00e-90	324.00
IUUC-Afu-008904	Aspergillus fumigatus	35.27	2.00e-86	311.00
IUUC-Ani-009198	Aspergillus nidulans	35.48	1.00e-87	315.00
IUUC-Ang-009662	Aspergillus niger	38.32	2.00e-90	324.00
IUUC-Aor-009881	Aspergillus oryzae	37.65	4.00e-90	323.00
IUUC-Ate-010333	Aspergillus terreus	34.68	7.00e-80	290.00
IUUC-Ame-011697	Astyanax mexicanus	60.59	0.00e+00	634.00
IUUC-Bgr-012254	Blumeria graminis	37.26	4.00e-93	333.00
IUUC-Bta-012615	Bos taurus	61.16	7.00e-176	608.00
IUUC-Bci-013720	Botrytis cinerea	35.27	1.00e-90	325.00
IUUC-Bdi-014302	Brachypodium distachyon	41.78	2.00e-96	344.00
IUUC-Bol-015594	Brassica oleracea	38.44	2.00e-84	305.00
IUUC-Bra-017465	Brassica rapa	40.00	9.00e-85	306.00
IUUC-Cel-018632	Caenorhabditis elegans	42.69	5.00e-112	396.00
IUUC-Cja-019747	Callithrix jacchus	58.61	2.00e-178	617.00
IUUC-Cfa-020288	Canis familiaris	58.61	5.00e-178	615.00
IUUC-Cpo-021440	Cavia porcellus	57.43	3.00e-177	613.00
IUUC-Cre-022716	Chlamydomonas reinhardtii	44.26	5.00e-80	289.00
IUUC-Csa-023139	Chlorocebus sabaeus	63.55	2.00e-135	473.00
IUUC-Cho-024481	Choloepus hoffmanni	60.04	6.00e-167	578.00
IUUC-Csv-026087	Ciona savignyi	88.06	0.00e+00	878.00
IUUC-Cgl-026538	Colletotrichum gloeosporioides	36.05	2.00e-87	315.00
IUUC-Cne-026793	Cryptococcus neoformans	37.85	1.00e-99	355.00
IUUC-Dre-028723	Danio rerio	60.63	8.00e-176	608.00
IUUC-Dno-029299	Dasypus novemcinctus	58.42	2.00e-177	613.00
IUUC-Dor-030345	Dipodomys ordii	48.89	2.00e-45	175.00
IUUC-Dse-031562	Dothistroma septosporum	33.90	1.00e-81	295.00
IUUC-Dme-031783	Drosophila melanogaster	54.88	7.00e-134	469.00
IUUC-Ete-032669	Echinops telfairi	58.91	2.00e-178	617.00
IUUC-Eca-033566	Equus caballus	58.61	1.00e-177	614.00
IUUC-Eeu-034524	Erinaceus europaeus	67.37	6.00e-103	366.00
IUUC-Fca-036215	Felis catus	58.61	8.00e-178	615.00
IUUC-Fal-037018	Ficedula albicollis	57.08	2.00e-150	524.00
IUUC-Fox-037936	Fusarium oxysporum	35.86	5.00e-81	293.00
IUUC-Fso-038366	Fusarium solani	37.63	2.00e-88	318.00
IUUC-Gmo-038966	Gadus morhua	57.70	2.00e-123	433.00
IUUC-Ggr-039942	Gaeumannomyces graminis	36.33	3.00e-83	301.00
IUUC-Gga-040797	Gallus gallus	58.50	7.00e-177	612.00
IUUC-Gac-042598	Gasterosteus aculeatus	58.32	2.00e-157	547.00
IUUC-Gma-044220	Glycine max	40.09	2.00e-89	321.00
IUUC-Ggo-044682	Gorilla gorilla	58.42	2.00e-178	617.00
IUUC-Hsa-045804	Homo sapiens	58.42	1.00e-177	614.00
IUUC-Hvu-047567	Hordeum vulgare	41.30	6.00e-88	316.00
IUUC-Itr-047882	Ictidomys tridecemlineatus	58.81	1.00e-178	617.00
IUUC-Kpa-049369	Komagataella pastoris	35.79	9.00e-61	226.00
IUUC-Lch-050074	Latimeria chalumnae	57.06	3.00e-160	556.00
IUUC-Lpe-051333	Leersia perrieri	42.52	2.00e-91	327.00
IUUC-Loc-052164	Lepisosteus oculatus	62.18	0.00e+00	637.00
IUUC-Lma-053088	Leptosphaeria maculans	34.33	4.00e-79	287.00
IUUC-Laf-053460	Loxodonta africana	58.61	4.00e-178	616.00
IUUC-Mcc-055859	Macaca mulatta	58.61	8.00e-178	615.00
IUUC-Meu-056134	Macropus eugenii	59.72	1.00e-178	618.00
IUUC-Mor-057251	Magnaporthe oryzae	36.38	2.00e-84	305.00
IUUC-Mpo-057375	Magnaporthe poae	39.92	4.00e-53	199.00
IUUC-Mtr-057656	Medicago truncatula	39.25	9.00e-83	299.00
IUUC-Mla-059145	Melampsora laricipopulina	40.22	7.00e-94	336.00
IUUC-Mga-059855	Meleagris gallopavo	59.62	3.00e-176	610.00
IUUC-Mvi-060372	Microbotryum violaceum	43.47	8.00e-95	339.00
IUUC-Mmr-060826	Microcebus murinus	58.22	2.00e-177	614.00
IUUC-Mdo-062119	Monodelphis domestica	59.72	2.00e-178	617.00
IUUC-Mmu-063351	Mus musculus	58.42	3.00e-177	613.00
IUUC-Mac-064846	Musa acuminata	41.15	2.00e-84	304.00
IUUC-Mpu-066006	Mustela putorius furo	58.61	8.00e-178	615.00
IUUC-Mlu-067398	Myotis lucifugus	58.22	4.00e-177	612.00
IUUC-Nfi-068399	Neosartorya fischeri	35.83	1.00e-90	325.00
IUUC-Ncr-068711	Neurospora crassa	37.95	3.00e-88	317.00
IUUC-Nle-069982	Nomascus leucogenys	58.61	2.00e-178	617.00
IUUC-Opr-070596	Ochotona princeps	58.81	8.00e-179	618.00
IUUC-Ont-072374	Oreochromis niloticus	58.51	7.00e-169	585.00
IUUC-Oan-073166	Ornithorhynchus anatinus	60.87	2.00e-148	517.00
IUUC-Ocu-074371	Oryctolagus cuniculus	58.81	2.00e-178	617.00
IUUC-Oba-075083	Oryza barthii	41.00	3.00e-92	330.00
IUUC-Obr-076405	Oryza brachyantha	41.12	1.00e-89	322.00
IUUC-Ogl-077683	Oryza glaberrima	41.00	3.00e-92	330.00
IUUC-Ogu-078486	Oryza glumaepatula	41.23	1.00e-91	329.00
IUUC-Oin-079679	Oryza indica	41.00	3.00e-95	341.00
IUUC-Olo-080243	Oryza longistaminata	44.51	1.00e-84	305.00
IUUC-Ome-081230	Oryza meridionalis	41.00	3.00e-95	340.00
IUUC-Oni-082961	Oryza nivara	41.00	4.00e-95	340.00
IUUC-Opu-083189	Oryza punctata	40.72	3.00e-92	331.00
IUUC-Oru-084353	Oryza rufipogon	41.72	2.00e-94	338.00
IUUC-Osa-085458	Oryza sativa	41.00	3.00e-95	340.00
IUUC-Ola-086940	Oryzias latipes	62.03	2.00e-177	614.00
IUUC-Olu-087580	Ostreococcus lucimarinus	34.85	1.00e-64	239.00
IUUC-Oga-088703	Otolemur garnettii	55.25	3.00e-165	573.00
IUUC-Oar-089829	Ovis aries	61.16	2.00e-176	610.00
IUUC-Ptr-090838	Pan troglodytes	58.42	1.00e-177	614.00
IUUC-Pan-092261	Papio anubis	58.50	8.00e-177	612.00
IUUC-Psi-093020	Pelodiscus sinensis	57.36	2.00e-176	610.00
IUUC-Pno-094858	Phaeosphaeria nodorum	35.55	2.00e-75	274.00
IUUC-Ppa-095531	Physcomitrella patens	41.48	7.00e-104	369.00
IUUC-Pfo-096812	Poecilia formosa	55.60	7.00e-150	522.00
IUUC-Pab-097805	Pongo abelii	52.08	9.00e-148	515.00
IUUC-Pop-100051	Populus trichocarpa	41.59	2.00e-91	328.00
IUUC-Pca-100152	Procavia capensis	58.42	1.00e-177	614.00
IUUC-Ppe-101244	Prunus persica	42.47	1.00e-95	342.00
IUUC-Pva-102529	Pteropus vampyrus	56.04	2.00e-166	577.00
IUUC-Pgr-103550	Puccinia graminis	34.48	4.00e-96	343.00
IUUC-Ptt-103951	Puccinia triticina	32.69	1.00e-80	292.00
IUUC-Pte-104151	Pyrenophora teres	36.13	9.00e-79	286.00
IUUC-Pyt-104571	Pyrenophora triticirepentis	35.74	8.00e-79	286.00
IUUC-Rno-105747	Rattus norvegicus	58.42	2.00e-177	614.00
IUUC-Sce-106418	Saccharomyces cerevisiae	31.87	2.00e-66	245.00
IUUC-Sha-107334	Sarcophilus harrisii	59.72	2.00e-178	617.00
IUUC-Sja-107794	Schizosaccharomyces japonicus	35.87	4.00e-73	266.00
IUUC-Spo-108189	Schizosaccharomyces pombe	38.84	5.00e-85	306.00
IUUC-Ssl-108550	Sclerotinia sclerotiorum	35.27	2.00e-89	321.00
IUUC-Smo-109578	Selaginella moellendorffii	41.37	2.00e-100	358.00
IUUC-Sit-110102	Setaria italica	39.91	3.00e-92	330.00
IUUC-Sly-111668	Solanum lycopersicum	41.22	7.00e-92	329.00
IUUC-Stu-111928	Solanum tuberosum	41.22	3.00e-92	330.00
IUUC-Sar-113266	Sorex araneus	55.60	1.00e-154	538.00
IUUC-Sbi-114134	Sorghum bicolor	40.14	2.00e-92	332.00
IUUC-Sre-115114	Sporisorium reilianum	38.45	7.00e-96	342.00
IUUC-Ssc-115443	Sus scrofa	58.61	7.00e-178	615.00
IUUC-Tgu-117157	Taeniopygia guttata	60.61	2.00e-174	604.00
IUUC-Tru-118587	Takifugu rubripes	61.13	2.00e-170	590.00
IUUC-Tsy-119157	Tarsius syrichta	64.80	4.00e-149	520.00
IUUC-Tni-120427	Tetraodon nigroviridis	60.97	6.00e-171	592.00
IUUC-Tca-121368	Theobroma cacao	41.27	3.00e-95	341.00
IUUC-Tre-122074	Trichoderma reesei	36.15	1.00e-83	302.00
IUUC-Tvi-122349	Trichoderma virens	34.38	2.00e-83	301.00
IUUC-Tae-123589	Triticum aestivum	40.59	2.00e-85	308.00
IUUC-Tur-125983	Triticum urartu	46.96	1.00e-78	284.00
IUUC-Tme-126951	Tuber melanosporum	40.21	6.00e-101	359.00
IUUC-Tbe-128136	Tupaia belangeri	54.06	2.00e-156	544.00
IUUC-Ttr-129169	Tursiops truncatus	57.82	2.00e-103	367.00
IUUC-Uma-129399	Ustilago maydis	38.26	2.00e-90	324.00
IUUC-Vda-129842	Verticillium dahliae	35.82	2.00e-87	315.00
IUUC-Vpa-130440	Vicugna pacos	58.42	2.00e-178	617.00
IUUC-Vvi-131075	Vitis vinifera	42.31	8.00e-95	339.00
IUUC-Xtr-132713	Xenopus tropicalis	34.71	1.00e-63	235.00
IUUC-Xma-133002	Xiphophorus maculatus	65.64	2.00e-142	496.00
IUUC-Yli-134569	Yarrowia lipolytica	35.62	9.00e-75	272.00
IUUC-Zma-135799	Zea mays	38.20	8.00e-90	322.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence