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Basic Information Integrated Annotations

Tag Content
UUCD2 ID IUUC-Mmu-064249
UUCD1 version UUC-MuM-01080
Ensembl Protein ID ENSMUSP00000023343.3
UniProt Accession Q9CPX6; Q3TXJ9; ATG3_MOUSE
Genbank Protein ID BAC57452.1; BAB23918.1; BAB27600.1; BAC37437.1; BAE29952.1; BAE34917.1; AAH10809.1
Protein Name Ubiquitin-like-conjugating enzyme ATG3; Autophagy-related protein 3
Genbank Nucleotide ID AB079386; AK005266; AK011409; AK078877; AK150914; AK159231; BC010809
Gene Name Atg3; Apg3l
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSMUSG00000022663.3 ENSMUST00000023343.3 ENSMUSP00000023343.3
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpressGXD
DNA & RNA Element
AREsitemicroRNATRANSFACRepTar
RAID2
Protein-protein Interaction
IIDiRefIndexPINAHINT
Mentha
Post-translational Modifications (PTMs)
CPLMdbPAFPhosphositePlusdbPTM
mUbiSiDa
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
E2/Autophagy_C 46.96 8.00e-64 241.00 IUUC-Ath-006802
E2/Autophagy_C 97.45 7.00e-171 597.00 IUUC-Hsa-046449
E2/Autophagy_C 33.95 4.00e-38 153.00 IUUC-Sce-106172
Active Site
Position(s) Description Evidence
264 Glycyl thioester intermediate {ECO:0000305}
Organism Mus musculus
Functional Description
(View)

Functional Description



     E2 conjugating enzyme required for the cytoplasm to vacuole transport (Cvt), autophagy, and mitochondrial homeostasis. Responsible for the E2-like covalent binding of phosphatidylethanolamine to the C-terminal Gly of ATG8-like proteins (GABARAP, GABARAPL1, GABARAPL2 or MAP1LC3A). The ATG12-ATG5 conjugate plays a role of an E3 and promotes the transfer of ATG8-like proteins from ATG3 to phosphatidylethanolamine (PE). This step is required for the membrane association of ATG8-like proteins. The formation of the ATG8-phosphatidylethanolamine conjugates is essential for autophagy and for the cytoplasm to vacuole transport (Cvt). Preferred substrate is MAP1LC3A. Also acts as an autocatalytic E2-like enzyme, catalyzing the conjugation of ATG12 to itself, ATG12 conjugation to ATG3 playing a role in mitochondrial homeostasis but not in autophagy. ATG7 (E1-like enzyme) facilitates this reaction by forming an E1-E2 complex with ATG3. ATG12-ATG3 conjugate is also formed upon viccina virus infection, leading to the disruption the cellular autophagy which is not necessary for vaccinia survival and proliferation. Promotes primary ciliogenesis by removing OFD1 from centriolar satellites via the autophagic pathway.
E2 conjugating enzyme required for the cytoplasm to vacuole transport (Cvt), autophagy, and mitochondrial homeostasis. Responsible for the E2-like covalent binding of phosphatidylethanolamine to the C-terminal Gly of ATG8-like proteins (GABARAP, GABARAPL1, GABARAPL2 or MAP1LC3A). The ATG12-ATG5 conjugate plays a role of an E3 and promotes the transfer of ATG8-like proteins from ATG3 to phosphatidylethanolamine (PE). This step is required for the membrane association of ATG8-like proteins. The formation of the ATG8-phosphatidylethanolamine conjugates is essential for autophagy and for the cytoplasm to vacuole transport (Cvt). Preferred substrate is MAP1LC3A. Also acts as an autocatalytic E2-like enzyme, catalyzing the conjugation of ATG12 to itself, ATG12 conjugation to ATG3 playing a role in mitochondrial homeostasis but not in autophagy. ATG7 (E1-like enzyme) facilitates this reaction by forming an E1-E2 complex with ATG3. ATG12-ATG3 conjugate is also formed upon viccina virus infection, leading to the disruption the cellular autophagy which is not necessary for vaccinia survival and proliferation. Promotes primary ciliogenesis by removing OFD1 from centriolar satellites via the autophagic pathway.
Protein Sequence
(Fasta)
MQNVINTVKG KALEVAEYLT PVLKESKFKE TGVITPEEFV AAGDHLVHHC PTWQWATGEE 60
LKVKAYLPTD KQFLVTKNVP CYKRCKQMEY SDELEAIIEE DDGDGGWVDT YHNTGITGIT 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Mmu-064249|E2,E2/Autophagy_C|Mus musculus
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Nucleotide Sequence
(Fasta)
CTGTTGGGAG AGTGTGAGAA GAGGAAGGGG AAGCCGGAAG GGGTGTTCAG TGGAGCTCCG 60
GGGAAGAGAG ACAGCTTGGA GAAGGCCGGG GGCTGCGCGC GCACCCGCCT CTCGCTCAGC 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Mmu-064249|E2,E2/Autophagy_C|Mus musculus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0007--Acetylation
KW-0072--Autophagy
KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-1017--Isopeptide bond
KW-0436--Ligase
KW-0653--Protein transport
KW-1185--Reference proteome
KW-0813--Transport
KW-0832--Ubl conjugation
KW-0833--Ubl conjugation pathway

Interpro

IPR007135--Autophagy-rel_prot_3
IPR019461--Autophagy-rel_prot_3_C
IPR007134--Autophagy-rel_prot_3_N

Pfam

PF03987--Autophagy_act_C
PF10381--Autophagy_C
PF03986--Autophagy_N

Gene Ontology

GO:0000153--C:cytoplasmic ubiquitin ligase complex
GO:0005829--C:cytosol
GO:0019777--F:Atg12 transferase activity
GO:0019776--F:Atg8 ligase activity
GO:0019899--F:enzyme binding
GO:0016874--F:ligase activity
GO:0019787--F:ubiquitin-like protein transferase activity
GO:0000045--P:autophagosome assembly
GO:0006464--P:cellular protein modification process
GO:0016236--P:macroautophagy
GO:0043653--P:mitochondrial fragmentation involved in apoptotic process
GO:0000422--P:mitophagy
GO:0050765--P:negative regulation of phagocytosis
GO:0044804--P:nucleophagy
GO:0015031--P:protein transport
GO:0016567--P:protein ubiquitination
GO:1902017--P:regulation of cilium assembly

KEGG mmu:67841
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-001111 Aegilops tauschii 44.94 6.00e-49 187.00
IUUC-Aml-002081 Ailuropoda melanoleuca 97.13 3.00e-170 590.00
IUUC-Atr-002712 Amborella trichopoda 45.42 1.00e-52 200.00
IUUC-Apl-003956 Anas platyrhynchos 76.62 1.00e-120 426.00
IUUC-Aca-004578 Anolis carolinensis 88.57 3.00e-161 560.00
IUUC-Aly-005823 Arabidopsis lyrata 46.96 7.00e-67 247.00
IUUC-Ath-006802 Arabidopsis thaliana 47.30 3.00e-67 248.00
IUUC-Ago-007855 Ashbya gossypii 37.91 4.00e-23 101.00
IUUC-Acl-008147 Aspergillus clavatus 50.63 6.00e-17 81.60
IUUC-Afl-008483 Aspergillus flavus 35.88 1.00e-32 134.00
IUUC-Afu-008818 Aspergillus fumigatus 31.67 3.00e-36 145.00
IUUC-Ani-009481 Aspergillus nidulans 51.76 9.00e-18 84.30
IUUC-Ang-009800 Aspergillus niger 37.84 5.00e-21 95.10
IUUC-Aor-010150 Aspergillus oryzae 35.88 1.00e-32 134.00
IUUC-Ate-010545 Aspergillus terreus 53.95 3.00e-17 82.00
IUUC-Ame-011793 Astyanax mexicanus 84.01 2.00e-155 541.00
IUUC-Bgr-012167 Blumeria graminis 47.67 1.00e-16 80.90
IUUC-Bta-012695 Bos taurus 98.09 1.00e-172 598.00
IUUC-Bci-013972 Botrytis cinerea 52.70 2.00e-17 83.20
IUUC-Bdi-014756 Brachypodium distachyon 45.27 3.00e-60 225.00
IUUC-Bol-015091 Brassica oleracea 44.27 9.00e-62 230.00
IUUC-Bra-017220 Brassica rapa 44.52 1.00e-64 239.00
IUUC-Cel-018143 Caenorhabditis elegans 50.47 6.00e-83 300.00
IUUC-Cja-018991 Callithrix jacchus 93.33 2.00e-173 601.00
IUUC-Cfa-020070 Canis familiaris 97.74 2.00e-169 588.00
IUUC-Cpo-021860 Cavia porcellus 97.45 1.00e-171 595.00
IUUC-Cre-022948 Chlamydomonas reinhardtii 40.32 2.00e-64 239.00
IUUC-Csa-023881 Chlorocebus sabaeus 97.13 4.00e-171 593.00
IUUC-Cho-024852 Choloepus hoffmanni 84.71 7.00e-155 539.00
IUUC-Cin-025787 Ciona intestinalis 64.13 2.00e-109 388.00
IUUC-Csv-026369 Ciona savignyi 64.24 6.00e-108 383.00
IUUC-Cgl-026680 Colletotrichum gloeosporioides 35.03 1.00e-19 90.50
IUUC-Cne-026905 Cryptococcus neoformans 37.84 4.00e-50 192.00
IUUC-Dre-028811 Danio rerio 80.76 2.00e-152 531.00
IUUC-Dno-030081 Dasypus novemcinctus 92.09 7.00e-165 572.00
IUUC-Dor-030183 Dipodomys ordii 97.71 4.00e-73 268.00
IUUC-Dse-031539 Dothistroma septosporum 43.48 9.00e-12 64.30
IUUC-Dme-031805 Drosophila melanogaster 61.21 1.00e-103 369.00
IUUC-Ete-033171 Echinops telfairi 91.08 3.00e-164 570.00
IUUC-Eca-034083 Equus caballus 98.41 8.00e-173 599.00
IUUC-Eeu-034804 Erinaceus europaeus 95.54 2.00e-163 568.00
IUUC-Fca-036289 Felis catus 97.77 3.00e-172 597.00
IUUC-Fal-037060 Ficedula albicollis 93.31 7.00e-161 559.00
IUUC-Fox-038051 Fusarium oxysporum 33.09 4.00e-28 119.00
IUUC-Fso-038124 Fusarium solani 47.06 2.00e-18 86.70
IUUC-Gmo-039538 Gadus morhua 80.76 1.00e-147 515.00
IUUC-Ggr-039880 Gaeumannomyces graminis 34.55 3.00e-20 92.80
IUUC-Gga-041108 Gallus gallus 92.68 1.00e-159 555.00
IUUC-Gac-041558 Gasterosteus aculeatus 82.54 2.00e-150 525.00
IUUC-Gma-043969 Glycine max 46.23 8.00e-65 240.00
IUUC-Ggo-045071 Gorilla gorilla 97.45 3.00e-172 597.00
IUUC-Hsa-046449 Homo sapiens 97.45 3.00e-172 597.00
IUUC-Hvu-047451 Hordeum vulgare 46.15 5.00e-60 224.00
IUUC-Itr-048360 Ictidomys tridecemlineatus 97.77 6.00e-172 596.00
IUUC-Kpa-049096 Komagataella pastoris 40.00 6.00e-25 107.00
IUUC-Lch-049726 Latimeria chalumnae 83.76 1.00e-158 551.00
IUUC-Lpe-050734 Leersia perrieri 44.27 9.00e-53 200.00
IUUC-Loc-051983 Lepisosteus oculatus 85.40 4.00e-150 523.00
IUUC-Lma-053038 Leptosphaeria maculans 35.31 7.00e-30 124.00
IUUC-Laf-054510 Loxodonta africana 87.11 3.00e-157 547.00
IUUC-Mcc-054792 Macaca mulatta 97.13 4.00e-171 593.00
IUUC-Meu-055965 Macropus eugenii 84.39 4.00e-139 487.00
IUUC-Mor-057292 Magnaporthe oryzae 30.75 1.00e-35 143.00
IUUC-Mtr-058282 Medicago truncatula 46.80 3.00e-66 245.00
IUUC-Mla-059144 Melampsora laricipopulina 64.10 2.00e-26 113.00
IUUC-Mga-059509 Meleagris gallopavo 92.36 4.00e-159 553.00
IUUC-Mvi-060281 Microbotryum violaceum 36.16 1.00e-47 184.00
IUUC-Mmr-061788 Microcebus murinus 97.45 5.00e-171 593.00
IUUC-Mdo-062922 Monodelphis domestica 95.54 1.00e-168 585.00
IUUC-Mac-064843 Musa acuminata 46.05 3.00e-66 244.00
IUUC-Mpu-065717 Mustela putorius furo 97.13 2.00e-167 581.00
IUUC-Mlu-067151 Myotis lucifugus 94.63 4.00e-155 540.00
IUUC-Nfi-068551 Neosartorya fischeri 34.18 5.00e-35 141.00
IUUC-Ncr-068846 Neurospora crassa 32.28 2.00e-33 136.00
IUUC-Nle-069790 Nomascus leucogenys 97.45 3.00e-172 597.00
IUUC-Ont-072517 Oreochromis niloticus 84.39 4.00e-149 520.00
IUUC-Oan-073285 Ornithorhynchus anatinus 87.93 2.00e-103 367.00
IUUC-Ocu-074695 Oryctolagus cuniculus 98.41 3.00e-173 600.00
IUUC-Oba-075515 Oryza barthii 45.55 2.00e-65 242.00
IUUC-Obr-076787 Oryza brachyantha 46.42 7.00e-65 240.00
IUUC-Ogl-077440 Oryza glaberrima 44.30 1.00e-65 243.00
IUUC-Ogu-078294 Oryza glumaepatula 45.55 2.00e-65 242.00
IUUC-Oin-079452 Oryza indica 46.15 4.00e-65 241.00
IUUC-Olo-080450 Oryza longistaminata 45.67 7.00e-64 237.00
IUUC-Ome-081514 Oryza meridionalis 45.55 3.00e-65 241.00
IUUC-Oni-082677 Oryza nivara 46.15 4.00e-65 241.00
IUUC-Opu-083925 Oryza punctata 46.80 6.00e-65 241.00
IUUC-Oru-084828 Oryza rufipogon 45.67 3.00e-64 238.00
IUUC-Osa-085937 Oryza sativa 46.15 3.00e-65 241.00
IUUC-Ola-086559 Oryzias latipes 80.09 2.00e-92 331.00
IUUC-Olu-087766 Ostreococcus lucimarinus 41.80 3.00e-59 221.00
IUUC-Oga-087983 Otolemur garnettii 96.83 1.00e-170 592.00
IUUC-Oar-089281 Ovis aries 97.77 1.00e-172 598.00
IUUC-Ptr-090983 Pan troglodytes 97.45 3.00e-172 597.00
IUUC-Pan-092457 Papio anubis 96.82 1.00e-170 592.00
IUUC-Psi-094046 Pelodiscus sinensis 87.93 3.00e-147 513.00
IUUC-Pno-094925 Phaeosphaeria nodorum 34.39 4.00e-30 125.00
IUUC-Ppa-095487 Physcomitrella patens 45.39 7.00e-65 240.00
IUUC-Pfo-096968 Poecilia formosa 84.81 4.00e-150 523.00
IUUC-Pab-098621 Pongo abelii 96.82 2.00e-169 588.00
IUUC-Pop-100007 Populus trichocarpa 47.10 1.00e-65 243.00
IUUC-Pca-100590 Procavia capensis 78.66 4.00e-133 467.00
IUUC-Ppe-101657 Prunus persica 47.46 1.00e-64 239.00
IUUC-Pva-102446 Pteropus vampyrus 97.77 3.00e-172 597.00
IUUC-Pgr-103604 Puccinia graminis 58.33 5.00e-26 112.00
IUUC-Ptt-103941 Puccinia triticina 59.76 7.00e-26 111.00
IUUC-Pte-104252 Pyrenophora teres 54.67 1.00e-17 83.60
IUUC-Pyt-104556 Pyrenophora triticirepentis 54.67 2.00e-17 83.20
IUUC-Rno-106025 Rattus norvegicus 98.41 4.00e-173 600.00
IUUC-Sce-106172 Saccharomyces cerevisiae 33.95 4.00e-38 151.00
IUUC-Sha-106858 Sarcophilus harrisii 95.86 2.00e-167 581.00
IUUC-Sja-107905 Schizosaccharomyces japonicus 47.83 1.00e-27 116.00
IUUC-Spo-108185 Schizosaccharomyces pombe 45.00 2.00e-19 89.00
IUUC-Smo-108883 Selaginella moellendorffii 44.04 2.00e-57 216.00
IUUC-Sit-110512 Setaria italica 45.95 1.00e-61 229.00
IUUC-Sly-111238 Solanum lycopersicum 46.67 1.00e-69 256.00
IUUC-Stu-112441 Solanum tuberosum 46.98 2.00e-70 259.00
IUUC-Sar-113039 Sorex araneus 83.33 5.00e-121 426.00
IUUC-Sbi-113776 Sorghum bicolor 47.26 4.00e-60 224.00
IUUC-Sre-115074 Sporisorium reilianum 54.12 6.00e-23 102.00
IUUC-Ssc-115262 Sus scrofa 98.09 3.00e-172 597.00
IUUC-Tgu-116790 Taeniopygia guttata 92.99 5.00e-160 556.00
IUUC-Tru-118160 Takifugu rubripes 79.11 5.00e-144 503.00
IUUC-Tsy-119145 Tarsius syrichta 78.98 1.00e-127 449.00
IUUC-Tni-119937 Tetraodon nigroviridis 76.51 5.00e-139 486.00
IUUC-Tca-121323 Theobroma cacao 47.30 2.00e-63 236.00
IUUC-Tre-121993 Trichoderma reesei 44.66 5.00e-19 88.60
IUUC-Tvi-122332 Trichoderma virens 44.66 3.00e-19 89.40
IUUC-Tae-124391 Triticum aestivum 46.49 6.00e-61 227.00
IUUC-Tur-126679 Triticum urartu 46.49 4.00e-60 224.00
IUUC-Tme-127159 Tuber melanosporum 38.24 8.00e-12 63.90
IUUC-Ttr-128261 Tursiops truncatus 97.59 5.00e-158 550.00
IUUC-Uma-129572 Ustilago maydis 41.30 1.00e-23 103.00
IUUC-Vda-129966 Verticillium dahliae 31.48 8.00e-38 150.00
IUUC-Vpa-130698 Vicugna pacos 86.03 5.00e-152 530.00
IUUC-Xtr-132878 Xenopus tropicalis 86.03 1.00e-156 545.00
IUUC-Xma-134017 Xiphophorus maculatus 84.49 1.00e-149 522.00
IUUC-Yli-134373 Yarrowia lipolytica 47.92 3.00e-20 92.40
IUUC-Zma-135222 Zea mays 44.81 6.00e-62 231.00
Created Date 25-Jun-2017

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