iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
TRANSFAC	RAID2
Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.70e-29	100.4	464	495

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf....sdtllvsGsdDgtikvWD 29
           gHt  v+c+++    +  +++s+sdDgt+++W 
   Q: 464  GHTRTVNCVSWnpqiP-SMMASASDDGTVRIWG 495
           8**********95554.799************7 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MQKAGCRLEH PSATKFRNHV MEGDWDKAEN DLNELKPLVH SPHAIVVRGA LEISQTLLGI 60
IVRMKFLLLQ QKYLEYLEDG KVLEALQVLR CELTPLKYNT ERIHVLSGYL MCSHAEDLRA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGACTGTTG ATCTCCTCAT GCAAAAAGGC AGGATGTCGT TTAGAGCATC CTTCTGCTAC 60
CAAATTCCGA AATCATGTCA TGGAAGGAGA CTGGGATAAG GTAAAGTAGG GCGTAGAGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR020472--G-protein_beta_WD-40_rep
IPR002469--Peptidase_S9B_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00668--CTLH
SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0005654--C:nucleoplasm

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000905	Aegilops tauschii	37.75	7.00e-90	324.00
IUUC-Aml-001381	Ailuropoda melanoleuca	98.64	0.00e+00	978.00
IUUC-Atr-002649	Amborella trichopoda	37.75	1.00e-91	330.00
IUUC-Apl-003200	Anas platyrhynchos	94.76	0.00e+00	942.00
IUUC-Aca-005122	Anolis carolinensis	94.16	0.00e+00	935.00
IUUC-Aly-005958	Arabidopsis lyrata	41.82	4.00e-82	298.00
IUUC-Ath-007549	Arabidopsis thaliana	39.47	1.00e-79	290.00
IUUC-Ago-007896	Ashbya gossypii	35.11	4.00e-18	86.70
IUUC-Acl-008259	Aspergillus clavatus	37.45	5.00e-84	305.00
IUUC-Afl-008669	Aspergillus flavus	36.19	3.00e-77	283.00
IUUC-Afu-008972	Aspergillus fumigatus	38.18	5.00e-63	234.00
IUUC-Ani-009455	Aspergillus nidulans	31.68	3.00e-59	223.00
IUUC-Ang-009832	Aspergillus niger	35.57	9.00e-75	274.00
IUUC-Aor-010221	Aspergillus oryzae	37.48	1.00e-80	294.00
IUUC-Ate-010262	Aspergillus terreus	38.26	3.00e-86	313.00
IUUC-Ame-011448	Astyanax mexicanus	88.78	0.00e+00	890.00
IUUC-Bgr-012047	Blumeria graminis	37.43	2.00e-79	290.00
IUUC-Bta-012566	Bos taurus	98.64	0.00e+00	977.00
IUUC-Bci-013589	Botrytis cinerea	34.39	2.00e-71	263.00
IUUC-Bdi-014338	Brachypodium distachyon	37.95	1.00e-90	327.00
IUUC-Bol-015916	Brassica oleracea	40.04	3.00e-81	296.00
IUUC-Bra-017911	Brassica rapa	40.45	9.00e-82	298.00
IUUC-Cel-018613	Caenorhabditis elegans	26.15	9.00e-33	135.00
IUUC-Cja-019082	Callithrix jacchus	98.83	0.00e+00	980.00
IUUC-Cfa-020788	Canis familiaris	98.83	0.00e+00	979.00
IUUC-Cpo-022453	Cavia porcellus	98.25	0.00e+00	974.00
IUUC-Csa-023815	Chlorocebus sabaeus	94.83	0.00e+00	792.00
IUUC-Cho-024572	Choloepus hoffmanni	86.58	2.00e-154	538.00
IUUC-Cin-025474	Ciona intestinalis	67.15	1.00e-114	405.00
IUUC-Csv-026251	Ciona savignyi	57.43	9.00e-172	596.00
IUUC-Cgl-026607	Colletotrichum gloeosporioides	37.73	7.00e-79	288.00
IUUC-Cne-026805	Cryptococcus neoformans	31.95	6.00e-43	169.00
IUUC-Cme-027218	Cyanidioschyzon merolae	27.41	3.00e-40	160.00
IUUC-Dre-027404	Danio rerio	88.59	0.00e+00	855.00
IUUC-Dno-029089	Dasypus novemcinctus	94.10	0.00e+00	941.00
IUUC-Dor-030714	Dipodomys ordii	86.21	0.00e+00	714.00
IUUC-Dse-031569	Dothistroma septosporum	33.69	3.00e-70	259.00
IUUC-Dme-032077	Drosophila melanogaster	56.80	6.00e-169	587.00
IUUC-Ete-032986	Echinops telfairi	73.31	5.00e-123	434.00
IUUC-Eca-033943	Equus caballus	98.83	0.00e+00	981.00
IUUC-Eeu-034468	Erinaceus europaeus	68.85	1.00e-122	432.00
IUUC-Fca-036556	Felis catus	93.92	0.00e+00	929.00
IUUC-Fal-036639	Ficedula albicollis	92.02	0.00e+00	925.00
IUUC-Fox-037720	Fusarium oxysporum	37.18	6.00e-78	285.00
IUUC-Fso-038206	Fusarium solani	35.46	1.00e-75	277.00
IUUC-Gmo-039395	Gadus morhua	86.64	0.00e+00	858.00
IUUC-Ggr-039738	Gaeumannomyces graminis	35.83	5.00e-75	275.00
IUUC-Gga-040577	Gallus gallus	94.88	0.00e+00	931.00
IUUC-Gac-041352	Gasterosteus aculeatus	88.25	0.00e+00	891.00
IUUC-Gma-043704	Glycine max	37.24	4.00e-84	305.00
IUUC-Ggo-044684	Gorilla gorilla	98.83	0.00e+00	982.00
IUUC-Hsa-046838	Homo sapiens	98.83	0.00e+00	982.00
IUUC-Hvu-047226	Hordeum vulgare	37.35	9.00e-87	314.00
IUUC-Itr-048020	Ictidomys tridecemlineatus	98.83	0.00e+00	981.00
IUUC-Kpa-049141	Komagataella pastoris	28.54	1.00e-43	171.00
IUUC-Lch-049848	Latimeria chalumnae	87.87	0.00e+00	776.00
IUUC-Lpe-050963	Leersia perrieri	39.16	4.00e-97	348.00
IUUC-Loc-052708	Lepisosteus oculatus	91.14	0.00e+00	896.00
IUUC-Lma-053156	Leptosphaeria maculans	33.77	4.00e-73	269.00
IUUC-Laf-054153	Loxodonta africana	97.86	0.00e+00	976.00
IUUC-Mcc-054742	Macaca mulatta	98.83	0.00e+00	982.00
IUUC-Meu-056633	Macropus eugenii	83.44	3.00e-132	465.00
IUUC-Mor-056939	Magnaporthe oryzae	38.76	4.00e-83	301.00
IUUC-Mpo-057600	Magnaporthe poae	35.45	1.00e-73	271.00
IUUC-Mtr-058724	Medicago truncatula	37.50	2.00e-83	302.00
IUUC-Mla-058912	Melampsora laricipopulina	40.77	3.00e-86	311.00
IUUC-Mga-059811	Meleagris gallopavo	91.68	0.00e+00	833.00
IUUC-Mvi-060274	Microbotryum violaceum	34.85	1.00e-82	301.00
IUUC-Mmr-060823	Microcebus murinus	98.44	0.00e+00	974.00
IUUC-Mdo-062394	Monodelphis domestica	94.55	0.00e+00	935.00
IUUC-Mmu-063924	Mus musculus	98.83	0.00e+00	983.00
IUUC-Mac-065563	Musa acuminata	38.96	7.00e-92	332.00
IUUC-Mpu-066858	Mustela putorius furo	94.46	0.00e+00	936.00
IUUC-Mlu-067659	Myotis lucifugus	98.64	0.00e+00	979.00
IUUC-Nfi-068498	Neosartorya fischeri	38.12	2.00e-84	306.00
IUUC-Ncr-068832	Neurospora crassa	37.35	1.00e-73	271.00
IUUC-Nle-069654	Nomascus leucogenys	98.83	0.00e+00	979.00
IUUC-Opr-071198	Ochotona princeps	75.67	4.00e-144	504.00
IUUC-Ont-071547	Oreochromis niloticus	88.78	0.00e+00	886.00
IUUC-Oan-073045	Ornithorhynchus anatinus	91.71	0.00e+00	908.00
IUUC-Ocu-073812	Oryctolagus cuniculus	98.44	0.00e+00	956.00
IUUC-Oba-075071	Oryza barthii	38.55	1.00e-96	347.00
IUUC-Obr-076614	Oryza brachyantha	38.88	1.00e-96	347.00
IUUC-Ogl-076963	Oryza glaberrima	38.55	1.00e-96	347.00
IUUC-Ogu-078436	Oryza glumaepatula	38.55	1.00e-96	347.00
IUUC-Oin-080021	Oryza indica	38.76	2.00e-96	346.00
IUUC-Olo-080298	Oryza longistaminata	38.55	4.00e-96	345.00
IUUC-Ome-081202	Oryza meridionalis	38.76	3.00e-96	345.00
IUUC-Oni-082604	Oryza nivara	38.76	2.00e-96	346.00
IUUC-Opu-083763	Oryza punctata	38.76	2.00e-96	346.00
IUUC-Oru-084243	Oryza rufipogon	38.76	2.00e-96	346.00
IUUC-Osa-086153	Oryza sativa	36.26	2.00e-77	283.00
IUUC-Ola-086670	Oryzias latipes	88.01	0.00e+00	891.00
IUUC-Oga-088723	Otolemur garnettii	89.10	0.00e+00	862.00
IUUC-Oar-090125	Ovis aries	98.64	0.00e+00	978.00
IUUC-Ptr-090787	Pan troglodytes	98.83	0.00e+00	979.00
IUUC-Pan-092573	Papio anubis	96.90	4.00e-144	504.00
IUUC-Psi-093579	Pelodiscus sinensis	94.36	0.00e+00	930.00
IUUC-Pma-094254	Petromyzon marinus	83.59	0.00e+00	691.00
IUUC-Pno-094912	Phaeosphaeria nodorum	34.50	5.00e-74	272.00
IUUC-Ppa-095307	Physcomitrella patens	44.09	6.00e-101	361.00
IUUC-Pfo-096394	Poecilia formosa	88.78	0.00e+00	887.00
IUUC-Pab-098459	Pongo abelii	98.64	0.00e+00	974.00
IUUC-Pop-099989	Populus trichocarpa	36.67	1.00e-81	296.00
IUUC-Pca-100574	Procavia capensis	99.12	8.00e-138	483.00
IUUC-Ppe-101881	Prunus persica	38.11	6.00e-81	294.00
IUUC-Pva-102404	Pteropus vampyrus	93.97	0.00e+00	912.00
IUUC-Pgr-103411	Puccinia graminis	29.82	3.00e-27	117.00
IUUC-Ptt-103705	Puccinia triticina	26.30	1.00e-44	174.00
IUUC-Pte-104023	Pyrenophora teres	35.70	2.00e-78	286.00
IUUC-Pyt-104759	Pyrenophora triticirepentis	35.26	1.00e-75	278.00
IUUC-Sce-106152	Saccharomyces cerevisiae	33.61	2.00e-15	77.40
IUUC-Sha-106497	Sarcophilus harrisii	97.67	0.00e+00	972.00
IUUC-Sja-107894	Schizosaccharomyces japonicus	31.79	9.00e-62	231.00
IUUC-Spo-108235	Schizosaccharomyces pombe	32.34	1.00e-63	237.00
IUUC-Smo-109054	Selaginella moellendorffii	42.08	8.00e-106	377.00
IUUC-Sit-110575	Setaria italica	39.08	4.00e-97	348.00
IUUC-Sly-111167	Solanum lycopersicum	38.72	2.00e-89	323.00
IUUC-Stu-112726	Solanum tuberosum	36.75	1.00e-83	303.00
IUUC-Sar-113539	Sorex araneus	98.32	3.00e-120	425.00
IUUC-Sbi-114344	Sorghum bicolor	38.88	1.00e-95	343.00
IUUC-Sre-115051	Sporisorium reilianum	29.03	6.00e-61	228.00
IUUC-Ssc-115532	Sus scrofa	98.83	0.00e+00	982.00
IUUC-Tgu-116728	Taeniopygia guttata	95.15	0.00e+00	951.00
IUUC-Tru-118358	Takifugu rubripes	86.37	0.00e+00	854.00
IUUC-Tsy-119284	Tarsius syrichta	89.72	0.00e+00	868.00
IUUC-Tni-119720	Tetraodon nigroviridis	86.81	0.00e+00	860.00
IUUC-Tca-121103	Theobroma cacao	34.97	2.00e-80	293.00
IUUC-Tre-122234	Trichoderma reesei	36.56	3.00e-72	266.00
IUUC-Tvi-122376	Trichoderma virens	34.76	7.00e-45	174.00
IUUC-Tae-125635	Triticum aestivum	38.35	1.00e-91	330.00
IUUC-Tur-126726	Triticum urartu	36.35	3.00e-91	329.00
IUUC-Tme-126972	Tuber melanosporum	40.90	2.00e-96	347.00
IUUC-Tbe-128063	Tupaia belangeri	77.25	4.00e-170	590.00
IUUC-Ttr-129184	Tursiops truncatus	92.61	0.00e+00	903.00
IUUC-Uma-129354	Ustilago maydis	31.33	1.00e-45	178.00
IUUC-Vda-129770	Verticillium dahliae	34.60	8.00e-71	261.00
IUUC-Vpa-130400	Vicugna pacos	98.64	0.00e+00	972.00
IUUC-Vvi-130991	Vitis vinifera	36.55	3.00e-80	292.00
IUUC-Xtr-132619	Xenopus tropicalis	90.21	0.00e+00	904.00
IUUC-Xma-134128	Xiphophorus maculatus	88.78	0.00e+00	889.00
IUUC-Yli-134521	Yarrowia lipolytica	33.20	9.00e-57	214.00
IUUC-Zma-135772	Zea mays	38.68	2.00e-89	323.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence