iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ptr-091566

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AACZ03067206

Gene Name

RNF38

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPTRG00000020933.5	ENSPTRT00000045497.2	ENSPTRP00000041707.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.10e-08	35.4	463	504

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C +C++df+    ++vlpC+H fha+C+ kw       + + +CP+Cr
   Q: 463  CVVCMCDFESRqlLRVLPCNHEFHAKCVDKW------LKANRTCPICR 504
           ********4434599****************......**********8 PP

Organism

Pan troglodytes

Protein Sequence
(Fasta)

MACKISPGAN SASLPGHPNK VICERVRLQS LFPLLPSDQN TTVQEDAHFK AFFQSEDSPS 60
PKRQRLSHSV FDYTSASPAP SPPMRPWEMT SNRQPPSVRP SQHHFSGERC NTPARNRRSP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGGAACCCGG TCGAAAGGGT CCTCTCTGGC GTCCTTCTGC TTCCGTGGGT TTCTGGACAG 60
GCTGCGTTTT GTTCTCAGGG GATGCAAGTT CTTCCTTTCA GGGTTGAAGC GTGAGAGAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005654--C:nucleoplasm
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001752	Ailuropoda melanoleuca	99.03	0.00e+00	830.00
IUUC-Atr-003122	Amborella trichopoda	45.95	3.00e-15	76.30
IUUC-Apl-003246	Anas platyrhynchos	90.63	0.00e+00	727.00
IUUC-Aca-005355	Anolis carolinensis	96.10	0.00e+00	696.00
IUUC-Bta-012401	Bos taurus	98.38	0.00e+00	692.00
IUUC-Bdi-014369	Brachypodium distachyon	37.36	4.00e-16	78.60
IUUC-Cja-018848	Callithrix jacchus	99.23	0.00e+00	876.00
IUUC-Cfa-020501	Canis familiaris	99.31	0.00e+00	691.00
IUUC-Cpo-021722	Cavia porcellus	98.24	0.00e+00	823.00
IUUC-Csa-024088	Chlorocebus sabaeus	99.77	0.00e+00	702.00
IUUC-Cho-024540	Choloepus hoffmanni	82.03	0.00e+00	647.00
IUUC-Cin-025552	Ciona intestinalis	65.98	4.00e-36	143.00
IUUC-Dre-028201	Danio rerio	69.82	1.00e-133	470.00
IUUC-Dno-029482	Dasypus novemcinctus	98.43	0.00e+00	817.00
IUUC-Dor-030261	Dipodomys ordii	88.26	0.00e+00	781.00
IUUC-Dse-031302	Dothistroma septosporum	47.73	6.00e-11	62.80
IUUC-Dme-032187	Drosophila melanogaster	64.23	3.00e-43	171.00
IUUC-Ete-032580	Echinops telfairi	90.22	0.00e+00	745.00
IUUC-Eca-033264	Equus caballus	98.61	0.00e+00	705.00
IUUC-Eeu-035181	Erinaceus europaeus	91.00	0.00e+00	753.00
IUUC-Fca-036484	Felis catus	98.83	0.00e+00	826.00
IUUC-Fal-037568	Ficedula albicollis	95.58	0.00e+00	719.00
IUUC-Gmo-038772	Gadus morhua	62.27	4.00e-130	457.00
IUUC-Gga-040685	Gallus gallus	94.42	0.00e+00	671.00
IUUC-Ggo-044571	Gorilla gorilla	99.81	0.00e+00	849.00
IUUC-Hsa-046118	Homo sapiens	99.81	0.00e+00	849.00
IUUC-Hvu-047245	Hordeum vulgare	45.33	2.00e-15	76.60
IUUC-Itr-048953	Ictidomys tridecemlineatus	99.13	0.00e+00	734.00
IUUC-Lch-050401	Latimeria chalumnae	92.62	0.00e+00	740.00
IUUC-Lpe-051226	Leersia perrieri	44.74	1.00e-15	77.40
IUUC-Loc-052875	Lepisosteus oculatus	86.18	1.00e-161	562.00
IUUC-Lma-052952	Leptosphaeria maculans	33.04	3.00e-11	63.50
IUUC-Laf-054381	Loxodonta africana	99.13	0.00e+00	729.00
IUUC-Mcc-055576	Macaca mulatta	99.81	0.00e+00	849.00
IUUC-Meu-056433	Macropus eugenii	91.38	6.00e-142	497.00
IUUC-Mtr-058188	Medicago truncatula	38.10	2.00e-14	73.20
IUUC-Mga-059597	Meleagris gallopavo	92.19	0.00e+00	676.00
IUUC-Mmr-061247	Microcebus murinus	99.41	0.00e+00	837.00
IUUC-Mdo-061822	Monodelphis domestica	97.45	0.00e+00	714.00
IUUC-Mmu-064200	Mus musculus	97.84	0.00e+00	729.00
IUUC-Mac-065545	Musa acuminata	39.18	2.00e-16	79.00
IUUC-Mpu-066571	Mustela putorius furo	99.22	0.00e+00	826.00
IUUC-Mlu-067948	Myotis lucifugus	98.44	0.00e+00	851.00
IUUC-Nle-069466	Nomascus leucogenys	99.41	0.00e+00	838.00
IUUC-Opr-071151	Ochotona princeps	98.80	2.00e-110	392.00
IUUC-Ont-072424	Oreochromis niloticus	66.34	2.00e-130	459.00
IUUC-Oan-073236	Ornithorhynchus anatinus	83.26	0.00e+00	629.00
IUUC-Ocu-073866	Oryctolagus cuniculus	99.03	0.00e+00	881.00
IUUC-Oba-075267	Oryza barthii	44.00	1.00e-14	74.30
IUUC-Ogl-077938	Oryza glaberrima	38.46	3.00e-15	75.50
IUUC-Ogu-078754	Oryza glumaepatula	44.00	1.00e-14	74.30
IUUC-Oin-080031	Oryza indica	38.46	3.00e-15	75.50
IUUC-Ome-081863	Oryza meridionalis	44.00	1.00e-14	74.30
IUUC-Oni-082943	Oryza nivara	44.00	1.00e-14	74.30
IUUC-Opu-083391	Oryza punctata	37.08	2.00e-15	75.90
IUUC-Oru-084675	Oryza rufipogon	44.00	1.00e-14	74.30
IUUC-Osa-085452	Oryza sativa	38.46	3.00e-15	75.50
IUUC-Oga-087997	Otolemur garnettii	99.41	0.00e+00	840.00
IUUC-Oar-090272	Ovis aries	98.24	0.00e+00	828.00
IUUC-Pan-091884	Papio anubis	99.61	0.00e+00	842.00
IUUC-Psi-093539	Pelodiscus sinensis	96.99	0.00e+00	712.00
IUUC-Pab-098694	Pongo abelii	99.77	0.00e+00	702.00
IUUC-Pop-098962	Populus trichocarpa	41.49	1.00e-16	79.70
IUUC-Pva-103055	Pteropus vampyrus	98.79	0.00e+00	788.00
IUUC-Rno-105006	Rattus norvegicus	97.92	0.00e+00	717.00
IUUC-Sit-109831	Setaria italica	38.46	6.00e-16	78.20
IUUC-Sly-111171	Solanum lycopersicum	36.05	4.00e-13	68.20
IUUC-Stu-112327	Solanum tuberosum	47.95	2.00e-15	76.60
IUUC-Sar-112966	Sorex araneus	97.06	0.00e+00	821.00
IUUC-Sre-114942	Sporisorium reilianum	29.85	6.00e-12	66.20
IUUC-Ssc-115502	Sus scrofa	99.22	0.00e+00	828.00
IUUC-Tgu-117480	Taeniopygia guttata	92.42	0.00e+00	701.00
IUUC-Tsy-118844	Tarsius syrichta	94.95	0.00e+00	787.00
IUUC-Tca-121858	Theobroma cacao	41.11	2.00e-16	80.10
IUUC-Tae-123101	Triticum aestivum	38.46	5.00e-16	78.60
IUUC-Tur-126249	Triticum urartu	36.26	3.00e-15	75.10
IUUC-Tbe-127237	Tupaia belangeri	88.16	0.00e+00	747.00
IUUC-Ttr-129073	Tursiops truncatus	98.58	0.00e+00	786.00
IUUC-Uma-129479	Ustilago maydis	29.85	1.00e-11	65.50
IUUC-Vpa-130240	Vicugna pacos	99.08	5.00e-148	517.00
IUUC-Vvi-131462	Vitis vinifera	38.89	5.00e-17	81.60
IUUC-Xtr-131963	Xenopus tropicalis	93.97	0.00e+00	757.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence