iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099206

Ensembl Protein ID

POPTR_0008s14780.1

UniProt Accession

B9HJT6; B9HJT6_POPTR

Genbank Protein ID

EEE88965.1

Protein Name

Cullin family protein

Genbank Nucleotide ID

CM000344

Gene Name

POPTRDRAFT_832803; POPTR_0008s14780g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0008s14780	POPTR_0008s14780.1	POPTR_0008s14780.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/Cullin	6.30e-222	739.7	32	630

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/Cullin

   S: 2    lreavkkilrqesvkkeyeelytavynlclskvgaklYkklkevleefikqvkkkveesedeqlLktynreWekfreqlkvlrkifayldr 92
           l++a+++i++++++  ++eely+++yn++l+k+g+klY+ l  ++++++k+++k++e+++++++L+ +nr+W++++++l+++r+i++y+dr
   Q: 32   LEHAIHEIYNHNASGLSFEELYRNAYNMVLHKFGEKLYNGLVATMTSHLKEISKSIEAAQGDSFLEELNRKWNDHNKALQMIRDILMYMDR 122
           789**************************************************************************************** PP
   S: 93   tyvkkskkvsevrkLaldlwrkeived..ikkrllelllklieaeRkgeavdrrllsgvveslveLslnklaiykesFEakfleatqefyk 181
           ty+    ++++v++L+l+lwr++i+++  i++rl+++ll+l+++eR+ge++dr l++++v++l++L+    ++y+e+FE++fle ++efy+
   Q: 123  TYIPS-VHKTPVHELGLNLWRDNIIHSskIQTRLQNTLLELVHRERTGEVIDRGLMRNIVKMLMDLG---SSVYQEDFEKPFLEVSAEFYS 209
           ****9.999*****************999*************************************9...9******************** PP
   S: 182  aesaeflqenevdeYlkkvearlneeeeraaryleestetkLlevvekeliakhlesll....aelvallrdkktedlsrmykLlsrvlng 268
            es++f++ +++ +Ylkk+e+rlnee er+ +yl++++e  + +vveke+ia+h+ +l+    ++lv++l d+k +dl+rmy+L++rv++g
   Q: 210  GESQKFIECCDCGDYLKKAEKRLNEEIERVTHYLDSKSEVRINNVVEKEMIANHMLRLVhmenSGLVNMLLDDKFDDLGRMYNLFRRVPDG 300
           **********************************************************999999*************************** PP
   S: 269  leellkeleshikeqgkaaltaeekekdpkkyVerllelknklqklvseaFnndakFlkaldkafetfvnknsvlkaakspEllAryiDql 359
           l+++++ ++sh++e gk+++t++e+ kdp+++V+ ll+ k+k+++++s+aFnnd++F++al+++fe+f+n n     ++spE+++ ++D++
   Q: 301  LSTIREVMTSHLRETGKQLVTDPERLKDPVEFVQCLLDEKDKYDSIISNAFNNDKTFQNALNSSFEYFINLN-----TRSPEFISLFVDDK 386
           ************************************************************************.....************** PP
   S: 360  LrksskglteeeleaqldkvllvfkyisekdvFekyYkkhLakRLlsgksasseaEesviekLkeecgaeftskLerMfqdlkvSedlnrq 450
           Lrk++kg+ ee++e +ldkv+++f+y++ekdvFekyYk+hLakRLlsgk++s++aE+s+i kLk+ecg++ftskLe+Mf+d+k+S+d+++ 
   Q: 387  LRKGLKGVSEEDVEIILDKVMMLFRYLQEKDVFEKYYKQHLAKRLLSGKTVSDDAERSLIVKLKTECGYQFTSKLEGMFTDMKTSQDTMQG 477
           ******************************************************************************************* PP
   S: 451  FkeekenteesesvelsvlvLsagaWptasetekvsLPaelektiekfeefYlekhsgRkLqWqhtlgraelkaelkkg.kyelqVstfQm 540
           F+   ++ e   +++l v+vL++g+Wpt++  + ++LPae+++++ekf+++Yl +h+gR+L+Wq+++g+a++ka++ kg k+el+Vst+Qm
   Q: 478  FY--ASHPELGDGPTLVVQVLTTGSWPTQPGVP-CNLPAEMSALCEKFRSYYLGTHTGRRLSWQTNMGTADIKATFGKGqKHELNVSTYQM 565
           **..99999********************9999.*********************************************99********** PP
   S: 541  avLLafnnsekvsveelkkatelpeeeLrrtlqsLvssk.kqvlkkepeskeieeedlfsvNqef 604
           +vL++fnn +++ ++e+++ate+p+++L+r+lqs++++k k+vl+kep+sk+i eed f vN++f
   Q: 566  CVLMLFNNADRLGYKEIEQATEIPTADLKRCLQSMACVKgKNVLRKEPMSKDIGEEDAFFVNDKF 630
           ***************************************************************99 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MSNQKKRNFQ IDAFKHRVVV DPKYADKTWK ILEHAIHEIY NHNASGLSFE ELYRNAYNMV 60
LHKFGEKLYN GLVATMTSHL KEISKSIEAA QGDSFLEELN RKWNDHNKAL QMIRDILMYM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAGGGCCA AATCCATATT TGCCTTATAT TTGTTACCAT ATCACCCACA GCAGCTAGCT 60
AGCTAGCTCC ATGCTAATAT CATCCCAGAG CCCATAAAAA TTAAAAACAT ACACTCCTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR016158--Cullin_homology
IPR001373--Cullin_N
IPR019559--Cullin_neddylation_domain
IPR016159--Cullin_repeat-like_dom
IPR011991--WHTH_DNA-bd_dom

PROSITE

PS50069--CULLIN_2

Pfam

PF00888--Cullin
PF10557--Cullin_Nedd8

SMART

SM00182--CULLIN
SM00884--Cullin_Nedd8

Gene Ontology

GO:0031461--C:cullin-RING ubiquitin ligase complex
GO:0031625--F:ubiquitin protein ligase binding
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0008s14780g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001031	Aegilops tauschii	83.07	0.00e+00	1095.00
IUUC-Aly-005566	Arabidopsis lyrata	86.75	0.00e+00	1350.00
IUUC-Acl-008317	Aspergillus clavatus	38.28	8.00e-151	527.00
IUUC-Afl-008727	Aspergillus flavus	37.69	2.00e-144	505.00
IUUC-Ani-009393	Aspergillus nidulans	36.16	1.00e-140	493.00
IUUC-Ang-009626	Aspergillus niger	37.30	1.00e-144	506.00
IUUC-Aor-010207	Aspergillus oryzae	37.69	6.00e-144	504.00
IUUC-Ate-010305	Aspergillus terreus	38.58	2.00e-145	508.00
IUUC-Bdi-014269	Brachypodium distachyon	83.40	0.00e+00	1259.00
IUUC-Bol-015350	Brassica oleracea	84.70	0.00e+00	1321.00
IUUC-Cne-027048	Cryptococcus neoformans	37.10	4.00e-123	434.00
IUUC-Dme-032112	Drosophila melanogaster	49.93	0.00e+00	702.00
IUUC-Hvu-047831	Hordeum vulgare	83.24	0.00e+00	1162.00
IUUC-Lpe-051396	Leersia perrieri	82.99	0.00e+00	1278.00
IUUC-Mtr-058317	Medicago truncatula	86.07	0.00e+00	1331.00
IUUC-Mla-059055	Melampsora laricipopulina	39.08	8.00e-137	480.00
IUUC-Mac-064718	Musa acuminata	81.86	0.00e+00	1266.00
IUUC-Oba-075332	Oryza barthii	82.71	0.00e+00	1259.00
IUUC-Obr-076435	Oryza brachyantha	83.41	0.00e+00	1181.00
IUUC-Ogl-077655	Oryza glaberrima	82.85	0.00e+00	1274.00
IUUC-Ogu-078458	Oryza glumaepatula	82.71	0.00e+00	1259.00
IUUC-Oin-079567	Oryza indica	82.72	0.00e+00	1273.00
IUUC-Olo-080930	Oryza longistaminata	81.67	0.00e+00	1257.00
IUUC-Ome-081353	Oryza meridionalis	82.85	0.00e+00	1273.00
IUUC-Oni-082378	Oryza nivara	82.85	0.00e+00	1274.00
IUUC-Opu-084055	Oryza punctata	82.72	0.00e+00	1274.00
IUUC-Oru-084202	Oryza rufipogon	82.85	0.00e+00	1260.00
IUUC-Osa-085290	Oryza sativa	82.99	0.00e+00	1275.00
IUUC-Sja-107676	Schizosaccharomyces japonicus	38.50	5.00e-152	531.00
IUUC-Spo-108135	Schizosaccharomyces pombe	37.43	4.00e-133	468.00
IUUC-Sit-110763	Setaria italica	84.64	0.00e+00	1286.00
IUUC-Sly-111142	Solanum lycopersicum	88.66	0.00e+00	1355.00
IUUC-Sbi-114690	Sorghum bicolor	83.54	0.00e+00	1281.00
IUUC-Sre-115005	Sporisorium reilianum	39.91	8.00e-147	513.00
IUUC-Tae-124292	Triticum aestivum	83.68	0.00e+00	1262.00
IUUC-Tur-126800	Triticum urartu	83.54	0.00e+00	1260.00
IUUC-Yli-134576	Yarrowia lipolytica	33.69	4.00e-114	405.00
IUUC-Zma-135030	Zea mays	83.13	0.00e+00	1277.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence