iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
FBgn0262519	FBtr0302046	FBpp0291256
FBgn0262519	FBtr0100394	FBpp0099808
FBgn0262519	FBtr0332152	FBpp0304462

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
microRNA	RAID2
Protein-protein Interaction
iRefIndex
Post-translational Modifications (PTMs)
PHOSIDA
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	5.90e-17	61.6	379	423

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           ++C vC++gge    ++ C+ C +++H  Cl+++  +e p+ + w Cp C+
   Q: 379  DYCEVCQQGGE----IILCDTCPRAYHLVCLEPE-LDEPPEGK-WSCPHCE 423
           79*********....9******************.99999997.******7 PP

Organism

Drosophila melanogaster

Protein Sequence
(Fasta)

MASEEENDDN FQEEEEAQED NAPAAELSND SDAPLKPNQN DEDDDYDPED SRRKKKGKKR 60
KTRKGEEKGR KKKKRKKNES EEDSDFVQHD EEVEYPSTSK RGRKRKEEKQ AAKEKESASS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCCGCCATAT TTGTTGAAGC CGCTTACAAT TGACTATTTT TTTCTCGTCG TGTCTGTGTG 60
TGCTTAATTA TTTGTTGTGG AAATTAAGAC AATTTCGTGT GCTCAAACAG TGTAAAAGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR012957--CHD_C2
IPR012958--CHD_N
IPR000953--Chromo/chromo_shadow_dom
IPR023780--Chromo_domain
IPR016197--Chromodomain-like
IPR002464--DNA/RNA_helicase_DEAH_CS
IPR009462--DUF1086
IPR009463--DUF1087
IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR009071--HMG_box_dom
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50013--CHROMO_2
PS00690--DEAH_ATP_HELICASE
PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF08074--CHDCT2
PF08073--CHDNT
PF00385--Chromo
PF06461--DUF1086
PF06465--DUF1087
PF00271--Helicase_C
PF00628--PHD
PF00176--SNF2_N

SMART

SM00298--CHROMO
SM00487--DEXDc
SM01146--DUF1086
SM01147--DUF1087
SM00490--HELICc
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0005524--F:ATP binding
GO:0008026--F:ATP-dependent helicase activity
GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding
GO:0006355--P:regulation of transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001361	Ailuropoda melanoleuca	60.99	0.00e+00	1399.00
IUUC-Atr-002868	Amborella trichopoda	32.61	1.00e-68	254.00
IUUC-Apl-004175	Anas platyrhynchos	61.94	0.00e+00	1415.00
IUUC-Aca-004774	Anolis carolinensis	57.56	0.00e+00	1410.00
IUUC-Aly-005645	Arabidopsis lyrata	40.11	1.00e-138	487.00
IUUC-Ath-007406	Arabidopsis thaliana	36.67	4.00e-141	496.00
IUUC-Ame-011098	Astyanax mexicanus	61.65	0.00e+00	1389.00
IUUC-Bgr-012211	Blumeria graminis	32.35	9.00e-65	241.00
IUUC-Bta-012951	Bos taurus	63.30	0.00e+00	1414.00
IUUC-Bol-016073	Brassica oleracea	37.22	1.00e-143	504.00
IUUC-Bra-016724	Brassica rapa	37.42	3.00e-144	506.00
IUUC-Cel-018108	Caenorhabditis elegans	55.22	0.00e+00	1241.00
IUUC-Cja-019018	Callithrix jacchus	63.13	0.00e+00	1419.00
IUUC-Cfa-021063	Canis familiaris	61.55	0.00e+00	1409.00
IUUC-Cpo-022083	Cavia porcellus	60.88	0.00e+00	1408.00
IUUC-Csa-023084	Chlorocebus sabaeus	61.88	0.00e+00	1424.00
IUUC-Cho-024361	Choloepus hoffmanni	64.69	0.00e+00	996.00
IUUC-Csv-025847	Ciona savignyi	55.83	0.00e+00	1277.00
IUUC-Dre-027505	Danio rerio	60.23	0.00e+00	1387.00
IUUC-Dno-029656	Dasypus novemcinctus	62.22	0.00e+00	1405.00
IUUC-Dor-030167	Dipodomys ordii	61.76	0.00e+00	1400.00
IUUC-Ete-032757	Echinops telfairi	57.32	0.00e+00	1227.00
IUUC-Eca-034372	Equus caballus	61.13	0.00e+00	1407.00
IUUC-Eeu-034777	Erinaceus europaeus	57.41	0.00e+00	1239.00
IUUC-Fca-036048	Felis catus	61.54	0.00e+00	1405.00
IUUC-Fal-037282	Ficedula albicollis	61.47	0.00e+00	1415.00
IUUC-Gmo-038957	Gadus morhua	63.16	0.00e+00	1086.00
IUUC-Gga-040216	Gallus gallus	59.09	0.00e+00	1754.00
IUUC-Gma-043999	Glycine max	40.02	0.00e+00	713.00
IUUC-Ggo-044514	Gorilla gorilla	61.80	0.00e+00	1424.00
IUUC-Hsa-046181	Homo sapiens	61.88	0.00e+00	1423.00
IUUC-Itr-048002	Ictidomys tridecemlineatus	62.22	0.00e+00	1406.00
IUUC-Lch-050343	Latimeria chalumnae	58.96	0.00e+00	1374.00
IUUC-Loc-052795	Lepisosteus oculatus	63.27	0.00e+00	1431.00
IUUC-Laf-053749	Loxodonta africana	61.62	0.00e+00	1409.00
IUUC-Mcc-055856	Macaca mulatta	61.88	0.00e+00	1422.00
IUUC-Meu-056292	Macropus eugenii	52.58	1.00e-169	590.00
IUUC-Mga-059630	Meleagris gallopavo	57.48	0.00e+00	1408.00
IUUC-Mmr-060986	Microcebus murinus	61.71	0.00e+00	1417.00
IUUC-Mdo-062971	Monodelphis domestica	62.57	0.00e+00	1404.00
IUUC-Mmu-063644	Mus musculus	61.47	0.00e+00	1408.00
IUUC-Mpu-066528	Mustela putorius furo	61.66	0.00e+00	1406.00
IUUC-Mlu-067785	Myotis lucifugus	62.13	0.00e+00	1398.00
IUUC-Nle-069824	Nomascus leucogenys	61.88	0.00e+00	1421.00
IUUC-Opr-070960	Ochotona princeps	61.56	0.00e+00	1382.00
IUUC-Ont-072418	Oreochromis niloticus	61.94	0.00e+00	1414.00
IUUC-Oan-072885	Ornithorhynchus anatinus	62.98	0.00e+00	938.00
IUUC-Ocu-074177	Oryctolagus cuniculus	62.22	0.00e+00	1405.00
IUUC-Oba-075626	Oryza barthii	32.61	5.00e-68	252.00
IUUC-Obr-076240	Oryza brachyantha	32.94	1.00e-70	261.00
IUUC-Ogl-077187	Oryza glaberrima	31.82	2.00e-67	250.00
IUUC-Olo-080567	Oryza longistaminata	30.95	3.00e-57	216.00
IUUC-Opu-083477	Oryza punctata	33.07	7.00e-71	261.00
IUUC-Ola-086880	Oryzias latipes	61.79	0.00e+00	1423.00
IUUC-Oga-088775	Otolemur garnettii	61.63	0.00e+00	1419.00
IUUC-Oar-090422	Ovis aries	62.22	0.00e+00	1404.00
IUUC-Ptr-090586	Pan troglodytes	61.83	0.00e+00	1419.00
IUUC-Pan-092282	Papio anubis	61.80	0.00e+00	1422.00
IUUC-Psi-093007	Pelodiscus sinensis	61.09	0.00e+00	1394.00
IUUC-Pfo-097530	Poecilia formosa	61.65	0.00e+00	1416.00
IUUC-Pab-097677	Pongo abelii	61.88	0.00e+00	1422.00
IUUC-Pop-099531	Populus trichocarpa	32.36	3.00e-70	259.00
IUUC-Pca-100559	Procavia capensis	56.29	0.00e+00	1265.00
IUUC-Ppe-101528	Prunus persica	33.60	5.00e-73	268.00
IUUC-Pva-103186	Pteropus vampyrus	60.74	0.00e+00	1390.00
IUUC-Rno-105378	Rattus norvegicus	61.29	0.00e+00	1407.00
IUUC-Sha-107233	Sarcophilus harrisii	62.49	0.00e+00	1404.00
IUUC-Smo-108946	Selaginella moellendorffii	38.67	2.00e-151	530.00
IUUC-Sit-110066	Setaria italica	33.72	8.00e-72	265.00
IUUC-Sly-110976	Solanum lycopersicum	40.59	0.00e+00	720.00
IUUC-Stu-112189	Solanum tuberosum	32.74	2.00e-70	259.00
IUUC-Sar-113511	Sorex araneus	32.13	2.00e-65	243.00
IUUC-Sbi-114606	Sorghum bicolor	33.40	3.00e-72	266.00
IUUC-Ssc-116303	Sus scrofa	61.88	0.00e+00	1417.00
IUUC-Tgu-117484	Taeniopygia guttata	58.54	0.00e+00	1756.00
IUUC-Tru-118745	Takifugu rubripes	59.21	0.00e+00	1734.00
IUUC-Tsy-119261	Tarsius syrichta	58.65	0.00e+00	1038.00
IUUC-Tni-120764	Tetraodon nigroviridis	61.65	0.00e+00	1400.00
IUUC-Tbe-128117	Tupaia belangeri	56.52	0.00e+00	738.00
IUUC-Ttr-128301	Tursiops truncatus	62.35	0.00e+00	1401.00
IUUC-Vpa-130209	Vicugna pacos	71.52	4.00e-130	459.00
IUUC-Vvi-130849	Vitis vinifera	40.07	0.00e+00	714.00
IUUC-Xtr-132668	Xenopus tropicalis	61.33	0.00e+00	1402.00
IUUC-Xma-133956	Xiphophorus maculatus	61.98	0.00e+00	1420.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence