iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
microRNA	RAID2
Protein-protein Interaction
IID	iRefIndex	PINA	Mentha
Post-translational Modifications (PTMs)
dbPAF	PHOSIDA
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	8.70e-12	45.3	60	105

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           ++C +C +gg+    +++Ce+C   fH aC + + +++lp+++ ++C++Cr+
   Q: 60   QICGICSSGGN----ILCCEQCPASFHLACIGYE-SSDLPDDN-FYCNRCRN 105
           79*********....9******************.*******6.******85 PP

Organism

Caenorhabditis elegans

Protein Sequence
(Fasta)

MQKKEKEGRR KLKYDSNDGL LPEIRRVCGF PHHISEELSA RGSGKKKKQV EEEWKWPEAQ 60
ICGICSSGGN ILCCEQCPAS FHLACIGYES SDLPDDNFYC NRCRNLPENV RLFPPEKCSP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTTCTTAGT TTTCAGAAAA TATCAATGCA GAAAAAAGAG AAAGAAGGCC GAAGAAAGCT 60
GAAATACGAC TCAAACGACG GTCTTCTGCC GGTAAAATTG GCAAATTTTC ACTTTTTCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR000253--FHA_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50006--FHA_DOMAIN
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF00628--PHD

SMART

SM00240--FHA
SM00249--PHD

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

cel:CELE_C44B9.4

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014663	Brachypodium distachyon	48.84	1.00e-10	61.20
IUUC-Bol-015215	Brassica oleracea	42.55	4.00e-09	56.20
IUUC-Bra-017954	Brassica rapa	42.55	3.00e-09	56.60
IUUC-Cho-024464	Choloepus hoffmanni	48.84	6.00e-10	59.30
IUUC-Csv-026298	Ciona savignyi	52.27	6.00e-10	57.40
IUUC-Dme-031758	Drosophila melanogaster	24.16	1.00e-22	100.00
IUUC-Ete-032488	Echinops telfairi	33.33	7.00e-10	58.90
IUUC-Fox-038014	Fusarium oxysporum	26.69	5.00e-16	79.30
IUUC-Fso-038262	Fusarium solani	30.09	5.00e-15	75.90
IUUC-Gmo-038919	Gadus morhua	30.83	4.00e-10	58.50
IUUC-Ggr-039977	Gaeumannomyces graminis	25.00	6.00e-12	65.90
IUUC-Hvu-047073	Hordeum vulgare	33.70	5.00e-12	65.90
IUUC-Loc-052581	Lepisosteus oculatus	35.14	1.00e-10	58.90
IUUC-Lma-053053	Leptosphaeria maculans	26.64	5.00e-16	79.00
IUUC-Mor-056922	Magnaporthe oryzae	25.91	4.00e-11	63.20
IUUC-Mpo-057458	Magnaporthe poae	26.23	3.00e-12	66.60
IUUC-Mvi-060276	Microbotryum violaceum	37.50	2.00e-07	49.30
IUUC-Ncr-068727	Neurospora crassa	24.21	1.00e-10	61.60
IUUC-Olo-080499	Oryza longistaminata	40.74	1.00e-10	62.00
IUUC-Opu-083209	Oryza punctata	40.74	1.00e-10	61.60
IUUC-Pte-104185	Pyrenophora teres	26.55	3.00e-15	77.40
IUUC-Pyt-104775	Pyrenophora triticirepentis	26.87	5.00e-14	72.40
IUUC-Sja-107964	Schizosaccharomyces japonicus	24.24	3.00e-13	68.60
IUUC-Sit-110355	Setaria italica	53.49	3.00e-11	63.20
IUUC-Sbi-113930	Sorghum bicolor	50.00	1.00e-09	58.20
IUUC-Tca-121757	Theobroma cacao	37.68	4.00e-10	59.70
IUUC-Tre-121959	Trichoderma reesei	23.21	3.00e-13	70.10
IUUC-Tvi-122553	Trichoderma virens	24.88	4.00e-12	65.90
IUUC-Tme-127204	Tuber melanosporum	28.71	3.00e-17	82.80
IUUC-Ttr-129017	Tursiops truncatus	32.35	3.00e-10	60.50
IUUC-Vvi-130865	Vitis vinifera	37.68	6.00e-10	59.30
IUUC-Yli-134436	Yarrowia lipolytica	26.58	4.00e-16	78.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence