iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
microRNA	miRNAMap	RAID2
Protein-protein Interaction
IID	PINA
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.30e-31	105.6	317	354
UBD/Beta-Prp	2.80e-45	155.1	266	433

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gH+ +v+ +af ++ t ++s+s D  +k+WD+ tg + 
   Q: 317  GHKLPVREVAFnNEgTEFLSASFDRYVKLWDTETGQVK 354
           7999*******8889*****************999876 PP
   S: 3    tdsvtclaf..sd.tllvsGsdDgtikvWD 29
           +d++ +++f  ++ +l++s    + + +WD
   Q: 540  SDDIISVDFaaDGrHLIIS--TKKGVVCWD 567
           5677788888655566677..667789999 PP

UBD/Beta-Prp

   S: 85   kcvhtlkghedsvlslsfspsg.dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvy 184
           k vht++gh++ v  l+++p++ + ++s s d  i++w++  +q +  t +gh+  v+ v+++ +g  + s+s Dr v+lWd +tg++ +++  gh +  y
   Q: 266  KLVHTYRGHNKGVNFLQWFPKSaHLFLSCSMDTKIKLWEVYDRQRVVRTYAGHKLPVREVAFNNEGTEFLSASFDRYVKLWDTETGQVKQRFHTGHVP--Y 364
           789*****************555*********************************************************************543443..7 PP
   S: 185  slsfdsng...kelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWd 250
           +l+++++      ++ g ++++++ wd ++ge+v+++  h + v+s+ f++++ r++s+s+D+s+riW 
   Q: 365  CLKYHPDDdknHMFLVGMQNKKIIQWDSRSGEIVQEYDRHLQAVNSITFFDKNRRFASTSDDKSVRIWE 433
           8887777777788999***************************************************94 PP

Organism

Caenorhabditis elegans

Protein Sequence
(Fasta)

MDALQAYGGS DSEHSDDDAS MDQVAKGKSS TLLERAIVTA PDVESKSAIR QVAIVDPKTK 60
EIKSNPKFDQ LFKPESGPVN HFKSEQQRSQ KNTLTGFVEP AHLNEFHFNR QIRSFDTLGY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAACTCAAAC AAATCAAAAA TGGATGCGCT ACAAGCGTAT GGCGGTAGCG ACAGTGAACA 60
CTCAGATGAT GACGCCAGCA TGGATCAGGT CGCAAAAGGA AAATCATCGA CATTGCTGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR032847--PRPF17
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0000398--P:mRNA splicing, via spliceosome

KEGG

cel:CELE_F49D11.1

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000473	Aegilops tauschii	38.94	5.00e-113	400.00
IUUC-Aml-002243	Ailuropoda melanoleuca	49.88	8.00e-123	432.00
IUUC-Atr-002502	Amborella trichopoda	39.93	5.00e-117	413.00
IUUC-Apl-003885	Anas platyrhynchos	53.28	1.00e-172	598.00
IUUC-Aca-004854	Anolis carolinensis	41.92	2.00e-121	427.00
IUUC-Aly-006158	Arabidopsis lyrata	37.52	3.00e-118	417.00
IUUC-Ath-007474	Arabidopsis thaliana	38.58	2.00e-117	414.00
IUUC-Ago-007726	Ashbya gossypii	33.67	4.00e-67	247.00
IUUC-Acl-008220	Aspergillus clavatus	38.64	5.00e-113	400.00
IUUC-Afl-008473	Aspergillus flavus	38.14	2.00e-110	391.00
IUUC-Afu-008773	Aspergillus fumigatus	37.88	1.00e-112	398.00
IUUC-Ani-009323	Aspergillus nidulans	37.33	2.00e-98	352.00
IUUC-Ang-009851	Aspergillus niger	37.71	1.00e-111	395.00
IUUC-Aor-009950	Aspergillus oryzae	38.14	2.00e-110	391.00
IUUC-Ate-010372	Aspergillus terreus	37.33	3.00e-111	394.00
IUUC-Ame-011660	Astyanax mexicanus	51.43	3.00e-177	613.00
IUUC-Bgr-012230	Blumeria graminis	37.74	6.00e-101	359.00
IUUC-Bta-012568	Bos taurus	52.33	8.00e-174	602.00
IUUC-Bci-013646	Botrytis cinerea	38.08	1.00e-96	345.00
IUUC-Bdi-014199	Brachypodium distachyon	38.30	3.00e-112	397.00
IUUC-Bol-015695	Brassica oleracea	38.85	8.00e-124	436.00
IUUC-Bra-017923	Brassica rapa	39.62	2.00e-127	447.00
IUUC-Cja-019071	Callithrix jacchus	51.09	3.00e-173	600.00
IUUC-Cfa-020559	Canis familiaris	51.27	5.00e-174	602.00
IUUC-Cpo-022356	Cavia porcellus	51.09	3.00e-173	600.00
IUUC-Cre-022594	Chlamydomonas reinhardtii	38.78	2.00e-72	264.00
IUUC-Csa-023125	Chlorocebus sabaeus	51.09	2.00e-173	600.00
IUUC-Cho-024676	Choloepus hoffmanni	49.90	1.00e-160	558.00
IUUC-Cin-025229	Ciona intestinalis	50.88	8.00e-168	582.00
IUUC-Csv-025868	Ciona savignyi	60.22	6.00e-35	137.00
IUUC-Cgl-026739	Colletotrichum gloeosporioides	37.35	2.00e-89	321.00
IUUC-Cne-026885	Cryptococcus neoformans	40.33	7.00e-115	406.00
IUUC-Dre-027631	Danio rerio	52.39	6.00e-179	619.00
IUUC-Dno-029815	Dasypus novemcinctus	46.87	2.00e-156	544.00
IUUC-Dor-030978	Dipodomys ordii	53.11	1.00e-145	508.00
IUUC-Dse-031520	Dothistroma septosporum	37.47	9.00e-85	306.00
IUUC-Dme-032050	Drosophila melanogaster	49.63	1.00e-169	588.00
IUUC-Ete-032866	Echinops telfairi	50.00	1.00e-168	584.00
IUUC-Eca-033384	Equus caballus	51.09	6.00e-172	595.00
IUUC-Eeu-034471	Erinaceus europaeus	43.82	6.00e-129	452.00
IUUC-Fca-035727	Felis catus	51.53	4.00e-174	603.00
IUUC-Fal-036774	Ficedula albicollis	53.38	9.00e-178	615.00
IUUC-Fox-037951	Fusarium oxysporum	37.52	1.00e-98	352.00
IUUC-Fso-038287	Fusarium solani	36.10	2.00e-93	334.00
IUUC-Gmo-039670	Gadus morhua	51.71	6.00e-176	609.00
IUUC-Ggr-039764	Gaeumannomyces graminis	37.43	3.00e-93	334.00
IUUC-Gga-040293	Gallus gallus	53.59	6.00e-176	609.00
IUUC-Gac-042159	Gasterosteus aculeatus	50.27	1.00e-175	608.00
IUUC-Gma-044299	Glycine max	48.83	2.00e-108	385.00
IUUC-Ggo-044864	Gorilla gorilla	51.27	8.00e-174	602.00
IUUC-Hsa-046602	Homo sapiens	51.27	8.00e-174	602.00
IUUC-Hvu-047431	Hordeum vulgare	24.63	5.00e-28	117.00
IUUC-Itr-047985	Ictidomys tridecemlineatus	56.26	2.00e-145	507.00
IUUC-Kpa-049318	Komagataella pastoris	39.31	7.00e-79	286.00
IUUC-Lch-049796	Latimeria chalumnae	47.96	2.00e-151	527.00
IUUC-Lpe-051153	Leersia perrieri	39.31	6.00e-116	409.00
IUUC-Loc-052467	Lepisosteus oculatus	52.52	0.00e+00	637.00
IUUC-Lma-053107	Leptosphaeria maculans	41.13	9.00e-95	339.00
IUUC-Laf-053787	Loxodonta africana	51.44	9.00e-178	615.00
IUUC-Mcc-055706	Macaca mulatta	51.09	3.00e-173	600.00
IUUC-Meu-056757	Macropus eugenii	57.14	1.00e-115	408.00
IUUC-Mor-057079	Magnaporthe oryzae	35.28	1.00e-90	325.00
IUUC-Mpo-057533	Magnaporthe poae	43.22	3.00e-92	330.00
IUUC-Mtr-057950	Medicago truncatula	48.41	3.00e-107	380.00
IUUC-Mla-058910	Melampsora laricipopulina	38.27	2.00e-119	421.00
IUUC-Mga-059366	Meleagris gallopavo	53.59	1.00e-175	608.00
IUUC-Mvi-060349	Microbotryum violaceum	36.73	2.00e-112	398.00
IUUC-Mmr-061209	Microcebus murinus	51.27	4.00e-178	616.00
IUUC-Mdo-062118	Monodelphis domestica	51.36	3.00e-180	623.00
IUUC-Mmu-063173	Mus musculus	51.54	7.00e-174	602.00
IUUC-Mac-065109	Musa acuminata	40.83	1.00e-116	412.00
IUUC-Mpu-066659	Mustela putorius furo	51.27	4.00e-174	603.00
IUUC-Mlu-067029	Myotis lucifugus	53.70	7.00e-173	598.00
IUUC-Nfi-068334	Neosartorya fischeri	38.49	1.00e-110	392.00
IUUC-Ncr-068675	Neurospora crassa	36.28	2.00e-93	334.00
IUUC-Nle-070113	Nomascus leucogenys	52.17	2.00e-172	597.00
IUUC-Opr-070685	Ochotona princeps	47.28	1.00e-159	555.00
IUUC-Ont-071680	Oreochromis niloticus	52.82	8.00e-177	612.00
IUUC-Oan-073573	Ornithorhynchus anatinus	53.18	3.00e-162	563.00
IUUC-Ocu-074074	Oryctolagus cuniculus	52.33	1.00e-177	614.00
IUUC-Oba-075625	Oryza barthii	39.45	5.00e-116	410.00
IUUC-Obr-076510	Oryza brachyantha	38.41	5.00e-116	410.00
IUUC-Ogl-077275	Oryza glaberrima	39.45	5.00e-116	410.00
IUUC-Ogu-078563	Oryza glumaepatula	39.45	5.00e-116	410.00
IUUC-Oin-079898	Oryza indica	48.83	5.00e-106	376.00
IUUC-Olo-081080	Oryza longistaminata	42.22	1.00e-112	398.00
IUUC-Oni-083121	Oryza nivara	39.45	4.00e-116	410.00
IUUC-Opu-083329	Oryza punctata	39.27	6.00e-115	406.00
IUUC-Oru-084807	Oryza rufipogon	39.24	5.00e-101	360.00
IUUC-Osa-086039	Oryza sativa	39.38	4.00e-116	410.00
IUUC-Ola-087149	Oryzias latipes	50.63	1.00e-175	608.00
IUUC-Olu-087627	Ostreococcus lucimarinus	38.22	1.00e-104	372.00
IUUC-Oga-088359	Otolemur garnettii	51.09	8.00e-174	602.00
IUUC-Oar-089390	Ovis aries	51.27	1.00e-173	601.00
IUUC-Ptr-090894	Pan troglodytes	51.27	8.00e-174	602.00
IUUC-Pan-092476	Papio anubis	51.09	3.00e-173	600.00
IUUC-Psi-093527	Pelodiscus sinensis	51.91	3.00e-161	560.00
IUUC-Pno-094771	Phaeosphaeria nodorum	40.90	4.00e-93	333.00
IUUC-Ppa-095386	Physcomitrella patens	41.86	7.00e-125	439.00
IUUC-Pfo-096139	Poecilia formosa	50.81	2.00e-176	610.00
IUUC-Pab-097838	Pongo abelii	49.80	2.00e-146	510.00
IUUC-Pop-099962	Populus trichocarpa	40.42	3.00e-123	434.00
IUUC-Pca-100876	Procavia capensis	41.85	3.00e-135	474.00
IUUC-Ppe-101777	Prunus persica	40.57	2.00e-118	417.00
IUUC-Pva-102418	Pteropus vampyrus	51.09	3.00e-173	600.00
IUUC-Pgr-103456	Puccinia graminis	39.79	6.00e-125	439.00
IUUC-Ptt-103731	Puccinia triticina	38.95	3.00e-115	407.00
IUUC-Pte-104386	Pyrenophora teres	41.09	4.00e-91	327.00
IUUC-Pyt-104560	Pyrenophora triticirepentis	41.09	5.00e-91	326.00
IUUC-Rno-105694	Rattus norvegicus	49.28	3.00e-162	563.00
IUUC-Sce-106339	Saccharomyces cerevisiae	40.06	1.00e-77	282.00
IUUC-Sha-106709	Sarcophilus harrisii	51.36	2.00e-177	613.00
IUUC-Sja-107817	Schizosaccharomyces japonicus	34.22	3.00e-98	350.00
IUUC-Spo-108331	Schizosaccharomyces pombe	34.87	5.00e-97	347.00
IUUC-Ssl-108530	Sclerotinia sclerotiorum	38.51	2.00e-90	325.00
IUUC-Smo-108778	Selaginella moellendorffii	38.35	3.00e-107	381.00
IUUC-Sit-110446	Setaria italica	39.10	1.00e-111	395.00
IUUC-Sly-111330	Solanum lycopersicum	49.71	1.00e-110	392.00
IUUC-Stu-112610	Solanum tuberosum	38.45	3.00e-119	420.00
IUUC-Sar-113065	Sorex araneus	39.60	6.00e-60	223.00
IUUC-Sbi-114005	Sorghum bicolor	39.06	4.00e-111	393.00
IUUC-Sre-114988	Sporisorium reilianum	39.86	9.00e-125	439.00
IUUC-Ssc-115760	Sus scrofa	51.27	7.00e-174	602.00
IUUC-Tgu-116493	Taeniopygia guttata	53.40	3.00e-179	620.00
IUUC-Tru-118489	Takifugu rubripes	50.54	2.00e-177	614.00
IUUC-Tsy-119332	Tarsius syrichta	51.27	3.00e-178	617.00
IUUC-Tni-120202	Tetraodon nigroviridis	48.31	1.00e-162	565.00
IUUC-Tca-121429	Theobroma cacao	47.97	8.00e-107	379.00
IUUC-Tre-122162	Trichoderma reesei	36.36	4.00e-95	340.00
IUUC-Tvi-122500	Trichoderma virens	36.77	3.00e-94	337.00
IUUC-Tae-125557	Triticum aestivum	38.49	2.00e-112	398.00
IUUC-Tur-126554	Triticum urartu	38.71	1.00e-111	395.00
IUUC-Tme-126919	Tuber melanosporum	39.24	5.00e-117	413.00
IUUC-Tbe-127968	Tupaia belangeri	49.72	1.00e-164	572.00
IUUC-Ttr-129215	Tursiops truncatus	51.09	4.00e-172	596.00
IUUC-Uma-129622	Ustilago maydis	39.82	4.00e-126	444.00
IUUC-Vda-129750	Verticillium dahliae	38.64	2.00e-101	361.00
IUUC-Vpa-130617	Vicugna pacos	52.04	1.00e-162	565.00
IUUC-Vvi-131238	Vitis vinifera	48.84	1.00e-108	385.00
IUUC-Xtr-131865	Xenopus tropicalis	52.40	5.00e-177	612.00
IUUC-Xma-133627	Xiphophorus maculatus	51.07	2.00e-179	620.00
IUUC-Yli-134390	Yarrowia lipolytica	37.40	2.00e-94	338.00
IUUC-Zma-135925	Zea mays	39.70	1.00e-110	392.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence