iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
ArrayExpress
DNA & RNA Element
miRNAMap	RAID2
Post-translational Modifications (PTMs)
dbPAF	PhosphositePlus
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
ULD/UDP/UBQ/UBQ_Other	43.24	4.00e-44	174.00	IUUC-Cel-018176
ULD/UDP/UBQ/UBQ_Other	34.62	1.00e-27	117.00	IUUC-Spo-108310

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MEVSGTSAPT VTVFISSSLN SFRSEKRYSR SLTIAEFKCK LELVVGSPAS CMELELYGAD 60
DQFYSKLDQE DALLGSYPVD DGCRIHVIDH SGVRLGEYED VSKVEKYEIS PEAYERRQNT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGCTATTGG AAGAACCGAG AGCCACGGAA GGCCTCTCGG GATTGGTTGG ACGCAACGGA 60
GGATCCGCCT GTCCGTGGAG AAAGGGCGAC AGCGATTGGC TGGTCATGTT AGGTGGAGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR000938--CAP-Gly_domain
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS00845--CAP_GLY_1
PS50245--CAP_GLY_2

Pfam

PF01302--CAP_GLY
PF14560--Ubiquitin_2

SMART

SM01052--CAP_GLY

KEGG

rno:103690005; rno:292777

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000863	Aegilops tauschii	39.02	5.00e-26	111.00
IUUC-Aml-002358	Ailuropoda melanoleuca	86.75	3.00e-118	417.00
IUUC-Atr-003043	Amborella trichopoda	39.74	5.00e-36	144.00
IUUC-Aca-004737	Anolis carolinensis	71.84	2.00e-82	297.00
IUUC-Aly-005916	Arabidopsis lyrata	40.17	7.00e-36	143.00
IUUC-Ath-007038	Arabidopsis thaliana	40.17	3.00e-36	144.00
IUUC-Ago-007723	Ashbya gossypii	34.88	2.00e-14	72.40
IUUC-Acl-008216	Aspergillus clavatus	34.75	7.00e-33	134.00
IUUC-Afl-008534	Aspergillus flavus	33.60	1.00e-30	126.00
IUUC-Afu-008927	Aspergillus fumigatus	34.89	2.00e-30	125.00
IUUC-Ani-009283	Aspergillus nidulans	37.65	5.00e-32	131.00
IUUC-Ang-009564	Aspergillus niger	35.12	5.00e-32	131.00
IUUC-Aor-010034	Aspergillus oryzae	33.60	1.00e-30	126.00
IUUC-Ate-010424	Aspergillus terreus	35.77	6.00e-32	130.00
IUUC-Ame-011741	Astyanax mexicanus	61.48	5.00e-80	290.00
IUUC-Bgr-011988	Blumeria graminis	35.77	2.00e-31	129.00
IUUC-Bta-013304	Bos taurus	85.66	2.00e-118	418.00
IUUC-Bci-013694	Botrytis cinerea	42.92	5.00e-39	154.00
IUUC-Bdi-014585	Brachypodium distachyon	38.33	8.00e-33	133.00
IUUC-Bol-015891	Brassica oleracea	40.35	1.00e-36	145.00
IUUC-Bra-017389	Brassica rapa	40.53	3.00e-36	144.00
IUUC-Cel-018176	Caenorhabditis elegans	44.59	1.00e-48	186.00
IUUC-Cja-019754	Callithrix jacchus	89.75	1.00e-117	415.00
IUUC-Cfa-020813	Canis familiaris	90.57	2.00e-122	431.00
IUUC-Cpo-021932	Cavia porcellus	89.75	1.00e-120	425.00
IUUC-Cre-022753	Chlamydomonas reinhardtii	38.53	4.00e-32	131.00
IUUC-Csa-023261	Chlorocebus sabaeus	89.34	9.00e-117	412.00
IUUC-Cin-025428	Ciona intestinalis	48.58	4.00e-60	224.00
IUUC-Csv-025811	Ciona savignyi	49.32	3.00e-57	214.00
IUUC-Cgl-026504	Colletotrichum gloeosporioides	36.36	1.00e-31	129.00
IUUC-Cne-026867	Cryptococcus neoformans	36.21	1.00e-31	129.00
IUUC-Cme-027227	Cyanidioschyzon merolae	37.69	3.00e-13	68.90
IUUC-Dre-028683	Danio rerio	65.92	2.00e-80	291.00
IUUC-Dno-029817	Dasypus novemcinctus	88.52	4.00e-117	413.00
IUUC-Dor-030906	Dipodomys ordii	87.30	3.00e-112	397.00
IUUC-Dse-031240	Dothistroma septosporum	39.11	4.00e-33	134.00
IUUC-Dme-031894	Drosophila melanogaster	42.80	3.00e-50	191.00
IUUC-Eca-034216	Equus caballus	87.30	2.00e-126	444.00
IUUC-Eeu-035155	Erinaceus europaeus	83.50	3.00e-93	333.00
IUUC-Fca-035461	Felis catus	90.16	2.00e-122	431.00
IUUC-Fal-037458	Ficedula albicollis	50.70	5.00e-14	73.20
IUUC-Fox-037822	Fusarium oxysporum	37.61	3.00e-34	138.00
IUUC-Fso-038149	Fusarium solani	36.28	2.00e-33	135.00
IUUC-Gmo-038810	Gadus morhua	56.72	1.00e-71	262.00
IUUC-Ggr-039751	Gaeumannomyces graminis	30.40	4.00e-20	91.70
IUUC-Gga-040168	Gallus gallus	41.05	9.00e-15	74.30
IUUC-Gac-041700	Gasterosteus aculeatus	60.49	7.00e-79	286.00
IUUC-Gma-044336	Glycine max	41.23	3.00e-38	151.00
IUUC-Ggo-044442	Gorilla gorilla	88.89	3.00e-96	343.00
IUUC-Hsa-046441	Homo sapiens	89.75	3.00e-117	414.00
IUUC-Hvu-047163	Hordeum vulgare	39.37	7.00e-29	120.00
IUUC-Itr-048652	Ictidomys tridecemlineatus	88.52	8.00e-129	452.00
IUUC-Kpa-049126	Komagataella pastoris	32.80	1.00e-31	129.00
IUUC-Lch-050256	Latimeria chalumnae	65.15	1.00e-92	332.00
IUUC-Lpe-051676	Leersia perrieri	38.46	1.00e-31	129.00
IUUC-Loc-051891	Lepisosteus oculatus	66.67	4.00e-85	307.00
IUUC-Lma-052977	Leptosphaeria maculans	39.84	1.00e-34	139.00
IUUC-Laf-053381	Loxodonta africana	87.30	2.00e-117	414.00
IUUC-Mcc-055434	Macaca mulatta	89.34	9.00e-117	412.00
IUUC-Meu-056675	Macropus eugenii	68.72	3.00e-84	304.00
IUUC-Mor-056937	Magnaporthe oryzae	40.00	1.00e-30	126.00
IUUC-Mpo-057404	Magnaporthe poae	37.61	4.00e-29	121.00
IUUC-Mtr-058357	Medicago truncatula	41.89	1.00e-36	146.00
IUUC-Mla-059125	Melampsora laricipopulina	42.51	2.00e-43	168.00
IUUC-Mga-059996	Meleagris gallopavo	50.00	4.00e-14	72.40
IUUC-Mvi-060558	Microbotryum violaceum	35.16	9.00e-35	140.00
IUUC-Mmr-061473	Microcebus murinus	90.98	6.00e-122	429.00
IUUC-Mdo-061846	Monodelphis domestica	80.66	1.00e-105	375.00
IUUC-Mmu-063321	Mus musculus	96.72	1.00e-127	448.00
IUUC-Mac-065590	Musa acuminata	40.43	3.00e-37	148.00
IUUC-Mpu-066149	Mustela putorius furo	89.75	1.00e-121	428.00
IUUC-Mlu-067002	Myotis lucifugus	88.52	6.00e-120	422.00
IUUC-Nfi-068351	Neosartorya fischeri	34.32	4.00e-29	121.00
IUUC-Ncr-068854	Neurospora crassa	35.62	6.00e-31	127.00
IUUC-Nle-069008	Nomascus leucogenys	84.43	4.00e-108	384.00
IUUC-Opr-070608	Ochotona princeps	83.20	9.00e-112	395.00
IUUC-Ont-071543	Oreochromis niloticus	60.74	3.00e-84	304.00
IUUC-Oan-073488	Ornithorhynchus anatinus	73.51	8.00e-70	255.00
IUUC-Ocu-073951	Oryctolagus cuniculus	89.75	6.00e-121	426.00
IUUC-Oba-075033	Oryza barthii	39.48	1.00e-35	142.00
IUUC-Obr-076908	Oryza brachyantha	39.48	2.00e-37	149.00
IUUC-Ogl-077907	Oryza glaberrima	39.22	5.00e-38	150.00
IUUC-Ogu-078871	Oryza glumaepatula	39.48	1.00e-35	142.00
IUUC-Oin-080206	Oryza indica	39.22	5.00e-38	150.00
IUUC-Olo-080756	Oryza longistaminata	54.02	1.00e-20	90.90
IUUC-Ome-081319	Oryza meridionalis	54.02	1.00e-20	90.90
IUUC-Oni-082550	Oryza nivara	39.48	8.00e-35	140.00
IUUC-Opu-083656	Oryza punctata	40.00	5.00e-33	134.00
IUUC-Oru-084482	Oryza rufipogon	39.48	1.00e-35	142.00
IUUC-Osa-085952	Oryza sativa	39.22	5.00e-38	150.00
IUUC-Ola-087407	Oryzias latipes	55.28	9.00e-79	286.00
IUUC-Olu-087778	Ostreococcus lucimarinus	37.80	1.00e-35	143.00
IUUC-Oga-088233	Otolemur garnettii	89.34	2.00e-117	414.00
IUUC-Oar-089581	Ovis aries	85.66	3.00e-125	440.00
IUUC-Ptr-091547	Pan troglodytes	89.75	3.00e-117	414.00
IUUC-Pan-092061	Papio anubis	89.34	9.00e-117	412.00
IUUC-Psi-093234	Pelodiscus sinensis	70.31	6.00e-74	269.00
IUUC-Pma-094359	Petromyzon marinus	57.99	4.00e-74	270.00
IUUC-Pno-094999	Phaeosphaeria nodorum	38.80	3.00e-36	144.00
IUUC-Ppa-095653	Physcomitrella patens	36.02	3.00e-29	122.00
IUUC-Pfo-096130	Poecilia formosa	58.85	7.00e-81	293.00
IUUC-Pop-099133	Populus trichocarpa	40.35	2.00e-38	152.00
IUUC-Pca-100784	Procavia capensis	77.05	2.00e-95	342.00
IUUC-Ppe-101764	Prunus persica	41.23	5.00e-38	150.00
IUUC-Pva-102882	Pteropus vampyrus	90.16	1.00e-123	435.00
IUUC-Pgr-103371	Puccinia graminis	38.68	4.00e-40	157.00
IUUC-Ptt-103764	Puccinia triticina	34.92	8.00e-29	120.00
IUUC-Pte-104265	Pyrenophora teres	37.04	1.00e-30	126.00
IUUC-Pyt-104528	Pyrenophora triticirepentis	28.47	3.00e-23	102.00
IUUC-Sce-106183	Saccharomyces cerevisiae	29.41	6.00e-13	67.80
IUUC-Sha-106933	Sarcophilus harrisii	36.36	1.00e-06	47.80
IUUC-Sja-107978	Schizosaccharomyces japonicus	39.11	5.00e-33	134.00
IUUC-Spo-108310	Schizosaccharomyces pombe	34.19	2.00e-30	125.00
IUUC-Ssl-108484	Sclerotinia sclerotiorum	34.53	5.00e-26	110.00
IUUC-Sit-110751	Setaria italica	39.06	3.00e-33	135.00
IUUC-Sly-111811	Solanum lycopersicum	40.60	9.00e-38	149.00
IUUC-Stu-111984	Solanum tuberosum	41.03	2.00e-38	152.00
IUUC-Sar-113382	Sorex araneus	81.32	7.00e-78	282.00
IUUC-Sbi-113807	Sorghum bicolor	37.89	1.00e-29	122.00
IUUC-Sre-115083	Sporisorium reilianum	34.94	8.00e-33	133.00
IUUC-Ssc-116306	Sus scrofa	87.70	7.00e-120	422.00
IUUC-Tru-117880	Takifugu rubripes	64.29	9.00e-91	325.00
IUUC-Tni-119713	Tetraodon nigroviridis	63.91	2.00e-82	298.00
IUUC-Tca-121819	Theobroma cacao	39.34	2.00e-38	152.00
IUUC-Tre-122044	Trichoderma reesei	39.73	3.00e-35	141.00
IUUC-Tvi-122273	Trichoderma virens	40.18	6.00e-35	140.00
IUUC-Tae-123023	Triticum aestivum	39.09	4.00e-29	120.00
IUUC-Tur-126446	Triticum urartu	41.67	5.00e-24	103.00
IUUC-Tme-127153	Tuber melanosporum	37.04	3.00e-36	145.00
IUUC-Tbe-127834	Tupaia belangeri	88.19	3.00e-59	220.00
IUUC-Ttr-128351	Tursiops truncatus	70.08	7.00e-95	339.00
IUUC-Uma-129608	Ustilago maydis	31.60	9.00e-29	120.00
IUUC-Vda-129806	Verticillium dahliae	35.00	1.00e-32	132.00
IUUC-Vpa-130329	Vicugna pacos	45.68	3.00e-14	73.60
IUUC-Vvi-131178	Vitis vinifera	41.41	1.00e-36	145.00
IUUC-Xtr-132139	Xenopus tropicalis	69.87	2.00e-95	341.00
IUUC-Xma-134015	Xiphophorus maculatus	59.26	5.00e-81	293.00
IUUC-Yli-134439	Yarrowia lipolytica	38.46	3.00e-33	134.00
IUUC-Zma-135720	Zea mays	38.60	2.00e-27	115.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence