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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Ath-007180
UUCD1 version UUC-ArT-01399
Ensembl Protein ID AT2G39940.1
UniProt Accession O04197; B2BD84; COI1_ARATH
Genbank Protein ID AAC17498.1; ABR45936.1; ABR45937.1; ABR45938.1; ABR45939.1; ABR45940.1; ABR45941.1; ABR45942.1; ABR45943.1; ABR45944.1; ABR45945.1; ABR45946.1; ABR45947.1; ABR45949.1; ABR45950.1; ABR45951.1; ABR45952.1; ABR45953.1; ABR45954.1; AAB95279.1; AEC09753.1; AAK73983.1; AAM91386.1
Protein Name Coronatine-insensitive protein 1; COI-1; F-box/LRR-repeat protein 2
Genbank Nucleotide ID AF036340; EF470606; EF470607; EF470608; EF470609; EF470610; EF470611; EF470612; EF470613; EF470614; EF470615; EF470616; EF470617; EF470619; EF470620; EF470621; EF470622; EF470623; EF470624; AF002109; CP002685; AY045625; AY133556
Gene Name COI1; FBL2; At2g39940; T28M21.10
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT2G39940 AT2G39940.1 AT2G39940.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein-protein Interaction
iRefIndexPINAHINTMentha
Protein 3D Structure
PDBMMDB
Protein Expression/Proteomics
GPMDB
Status Reviewed
Details
Family Domain References (PMIDs)
E3 adaptor/Cullin RING/SCF/F-box F-box 19717617; 17637675
Organism Arabidopsis thaliana
Functional Description
(View)

Functional Description


     Required for jasmonate-regulated plant fertility and defense processes, and for coronatine and/or other elicitors perceptions/responses. Seems to not be required for meiosis. Required for the regulation of some genes induced by wounding, but not for all. Component of SCF(COI1) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins (probably including the ribulose bisphosphate carboxylase small chain 1B RBCS-1B and the histone deacetylase HDA6). These SCF complexes play crucial roles in regulating response to jasmonate, and their interactions with the COP9 signalosome (CSN) appear to be important for their activity. Interacts with TIFY10A and inositol pentakisphosphate to form a high-affinity jasmonates coreceptor. Involved in the regulation of plant gene expression during plant-pathogen interactions with Pseudomonas syringae and Alternaria brassicicola.
 Required for jasmonate-regulated plant fertility and defense processes, and for coronatine and/or other elicitors perceptions/responses. Seems to not be required for meiosis. Required for the regulation of some genes induced by wounding, but not for all. Component of SCF(COI1) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins (probably including the ribulose bisphosphate carboxylase small chain 1B RBCS-1B and the histone deacetylase HDA6). These SCF complexes play crucial roles in regulating response to jasmonate, and their interactions with the COP9 signalosome (CSN) appear to be important for their activity. Interacts with TIFY10A and inositol pentakisphosphate to form a high-affinity jasmonates coreceptor. Involved in the regulation of plant gene expression during plant-pathogen interactions with Pseudomonas syringae and Alternaria brassicicola.
Protein Sequence
(Fasta)
MEDPDIKRCK LSCVATVDDV IEQVMTYITD PKDRDSASLV CRRWFKIDSE TREHVTMALC 60
YTATPDRLSR RFPNLRSLKL KGKPRAAMFN LIPENWGGYV TPWVTEISNN LRQLKSVHFR 120
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Protein Fasta Sequence


>IUUC-Ath-007180|E3,F-box|Arabidopsis thaliana
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Nucleotide Sequence
(Fasta)
GCAAAAATGA AAAGAAAAAC ATAGAAGTAG AGAGAAGATC GCATCTCGAC CGTCAACTTC 60
AGTGTATGAA ATAATGATCG TCCCACTTGA TCCTCAAAAA TATTATTAAC CAAACAAAAT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ath-007180|E3,F-box|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0002--3D-structure
KW-0181--Complete proteome
KW-1184--Jasmonic acid signaling pathway
KW-0433--Leucine-rich repeat
KW-0611--Plant defense
KW-1185--Reference proteome
KW-0677--Repeat
KW-0833--Ubl conjugation pathway
Interpro

IPR032675--L_dom-like
Gene Ontology

GO:0009901--P:anther dehiscence
GO:0006952--P:defense response
GO:0042742--P:defense response to bacterium
GO:0050832--P:defense response to fungus
GO:0009861--P:jasmonic acid and ethylene-dependent systemic resistance
GO:0009867--P:jasmonic acid mediated signaling pathway
GO:0031348--P:negative regulation of defense response
GO:0016567--P:protein ubiquitination
GO:0009909--P:regulation of flower development
GO:0010218--P:response to far red light
GO:0009625--P:response to insect
GO:0009753--P:response to jasmonic acid
GO:0009611--P:response to wounding
GO:0048364--P:root development
GO:0031146--P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
GO:0009641--P:shade avoidance
GO:0048443--P:stamen development
GO:0010118--P:stomatal movement
KEGG ath:AT2G39940
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000796 Aegilops tauschii 57.80 0.00e+00 640.00
IUUC-Atr-002549 Amborella trichopoda 65.91 0.00e+00 763.00
IUUC-Aly-005745 Arabidopsis lyrata 97.64 0.00e+00 1147.00
IUUC-Bdi-014782 Brachypodium distachyon 58.80 0.00e+00 696.00
IUUC-Bol-015554 Brassica oleracea 89.32 0.00e+00 1067.00
IUUC-Bra-016888 Brassica rapa 89.83 0.00e+00 1071.00
IUUC-Gma-043551 Glycine max 70.26 0.00e+00 796.00
IUUC-Hvu-047266 Hordeum vulgare 56.99 0.00e+00 691.00
IUUC-Lpe-051259 Leersia perrieri 57.89 0.00e+00 691.00
IUUC-Mtr-058101 Medicago truncatula 70.39 0.00e+00 847.00
IUUC-Mla-058951 Melampsora laricipopulina 38.30 7.00e-03 34.70
IUUC-Mac-064569 Musa acuminata 63.95 0.00e+00 777.00
IUUC-Oba-075167 Oryza barthii 58.99 0.00e+00 686.00
IUUC-Obr-076639 Oryza brachyantha 58.04 0.00e+00 692.00
IUUC-Ogl-077001 Oryza glaberrima 58.99 0.00e+00 686.00
IUUC-Ogu-077962 Oryza glumaepatula 58.99 0.00e+00 686.00
IUUC-Oin-080055 Oryza indica 58.99 0.00e+00 687.00
IUUC-Olo-080585 Oryza longistaminata 56.82 0.00e+00 662.00
IUUC-Ome-081458 Oryza meridionalis 58.81 0.00e+00 685.00
IUUC-Oni-082828 Oryza nivara 58.99 0.00e+00 686.00
IUUC-Opu-083852 Oryza punctata 55.72 0.00e+00 683.00
IUUC-Oru-084264 Oryza rufipogon 58.99 0.00e+00 686.00
IUUC-Osa-085473 Oryza sativa 58.99 0.00e+00 686.00
IUUC-Ppa-095375 Physcomitrella patens 39.93 2.00e-127 448.00
IUUC-Pop-098824 Populus trichocarpa 69.96 0.00e+00 796.00
IUUC-Ppe-101270 Prunus persica 72.65 0.00e+00 844.00
IUUC-Smo-109025 Selaginella moellendorffii 40.75 7.00e-126 443.00
IUUC-Sit-110450 Setaria italica 58.10 0.00e+00 670.00
IUUC-Sly-111556 Solanum lycopersicum 68.31 0.00e+00 771.00
IUUC-Sbi-114639 Sorghum bicolor 58.12 0.00e+00 670.00
IUUC-Tca-121390 Theobroma cacao 73.25 0.00e+00 861.00
IUUC-Tae-124864 Triticum aestivum 56.95 0.00e+00 686.00
IUUC-Tur-126659 Triticum urartu 57.62 0.00e+00 646.00
IUUC-Vvi-131061 Vitis vinifera 72.15 0.00e+00 829.00
Created Date 25-Jun-2017

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