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Basic Information Integrated Annotations

Tag Content
iUUCD ID IUUC-Ath-006892
Ensembl Protein ID AT4G11920.1
UniProt Accession Q8VZS9; Q9T060; FZR1_ARATH
Genbank Protein ID CAB44330.1; CAB78235.1; AEE83070.1; AAL36231.1; AAM14174.1
Protein Name Protein FIZZY-RELATED 1; Cell cycle switch protein CCS52A2
Genbank Nucleotide ID AL078606; AL161533; CP002687; AY063875; AY091235
Gene Name FZR1; CCS52A2; CDH1-1; At4g11920; T26M18.130
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT4G11920 AT4G11920.1 AT4G11920.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein-protein Interaction
iRefIndexPINAHINTMentha
Post-translational Modifications (PTMs)
dbPPT
Protein Expression/Proteomics
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/APC_C/CDC20 4.50e-142 473.7 156 457
E3 adaptor/Cullin RING/DCX/DWD 3.50e-24 84.7 290 320
UBD/Beta-Prp 3.00e-45 155.6 211 451
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/APC_C/CDC20

   S: 1    pekvldapelrddfylnLldWssknvlavaLgssvylwsaktgdvskladleekdlvtsvswieegtllavGtkkgeveiyDveekkkvrtltghsar 98
    p+kvldap l+ddfylnL+dWs++nvlav+Lg++vylw+a++++v+kl+dl +++v+sv w +gt+la+Gt++g+v+i+Dv ++k++rt++gh r
   Q: 156 PYKVLDAPALQDDFYLNLVDWSAQNVLAVGLGNCVYLWNACSSKVTKLCDLGVDETVCSVGWALRGTHLAIGTSSGTVQIWDVLRCKNIRTMEGHRLR 253
    79************************************************************************************************ PP
   S: 99 vgaLsWnaevlssGsrdgeilhrdvrvkelklstlqahaqevCGlkwnedaklLasGGnDnsvsvwdasssePlkkfkehkaavkaiawsPwqkslLa 196
    vgaL+W + vlssGsrd++il+rd+r++e ++s+l++h++e+CGlkw++d+++LasGGnDn++ vw+++s++P+ +f eh aavkaiawsP++ +lLa
   Q: 254 VGALAWSSSVLSSGSRDKSILQRDIRTQEDHVSKLKGHKSEICGLKWSSDNRELASGGNDNKLFVWNQHSTQPVLRFCEHAAAVKAIAWSPHHFGLLA 351
    ************************************************************************************************** PP
   S: 197 sGGGtaDrcikfwntltgalleeidtgsqvcsllwskkskelvsthGfaenkitlwkypslskvaelkgheaRvlslalspdgeaivtaagDetlrfw 294
    sGGGtaDrci+fwnt+t + l+++dt+sqvc+l+wsk+ +elvsthG+++n+i++wkyp++sk+a+l+gh++Rvl+la+spdg++ivt+agDetlrfw
   Q: 352 SGGGTADRCIRFWNTTTNTHLNCVDTNSQVCNLVWSKNVNELVSTHGYSQNQIIVWKYPTMSKLATLTGHSYRVLYLAVSPDGQTIVTGAGDETLRFW 449
    ************************************************************************************************** PP
   S: 295 klfdkkka 302
    ++f + k+
   Q: 450 NVFPSPKS 457
    ***87665 PP
   


   E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWD 29
    gH++++++l++ sd + l+sG++D+++ vW+
   Q: 290 GHKSEICGLKWsSDnRELASGGNDNKLFVWN 320
    8***********88799*************9 PP
   


   UBD/Beta-Prp

   S: 12   vitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdls.tgkcvhtlkghedsvlslsfspsgdk 108
    +++v ++ +++la g +gt+++wdv + k +r+++gh v a+ +s++ +l +gs+D+ i d++ + + v++lkgh+++++ l++s ++
   Q: 211 TVCSVGWALRGTHLAIGTSSGTVQIWDVLRCKNIRTMEGHRLRVGALAWSSS--VLSSGSRDKSILQRDIRtQEDHVSKLKGHKSEICGLKWSSDNRE 306
    4666888889999***************************************..9*******99988899945689********************** PP
   S: 109 lvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsG..slDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvs..gsld 201
    l+sG++d+ + vw+ ++ q + + +h ++v ++++p ll+sG ++Dr++r+W+ t++ l +++v l +++n +elvs g
   Q: 307 LASGGNDNKLFVWNQHSTQPVL-RFCEHAAAVKAIAWSPHHfGLLASGggTADRCIRFWNTTTNTHLNCVD--TNSQVCNLVWSKNVNELVSthGYSQ 401
    **********************.9*****************999**963369*************999995..599***************977889* PP
   S: 202 gtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdl 251
    +++++w + t + + tl+gh+ v+ +++sp+++ +v+g+ D+++r+W++
   Q: 402 NQIIVWKYPTMSKLATLTGHSYRVLYLAVSPDGQTIVTGAGDETLRFWNV 451
    ************************************************96 PP
   

Organism Arabidopsis thaliana
Functional Description
(View)

Functional Description



     Activator protein that regulates the ubiquitin ligase activity and substrate specificity of the anaphase promoting complex/cyclosome (APC/C). Required for meristem organization and maintenance of quiescent center identity and stem cells.
Activator protein that regulates the ubiquitin ligase activity and substrate specificity of the anaphase promoting complex/cyclosome (APC/C). Required for meristem organization and maintenance of quiescent center identity and stem cells.
Protein Sequence
(Fasta)
MEEDESTTPK KKSDSQLNLP PSMNRPTVSL ESRINRLIDS NHYHSPSKPI YSDRFIPSRS 60
GSNFALFDLA SSSPNKKDGK EDGAGSYASL LKTALFGPVT PEKSDVVNGF SPSGNIFRFK 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Ath-006892|E3,CDC20;E3,WD_repeat;UBD,Beta-Prp|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CTTATTTTCG CACCAATTCA CTTGACATTT TCTGTTTCCC TCAACAATTT TCCCGGGAAA 60
GAAAAAAAAA ACTTTAGTGA AGAAACAAAA AAAAACAGAA AGATCTCAAC TTTTTTCAAC 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Ath-006892|E3,CDC20;E3,WD_repeat;UBD,Beta-Prp|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0131--Cell cycle
KW-0132--Cell division
KW-0181--Complete proteome
KW-0498--Mitosis
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0833--Ubl conjugation pathway
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR033010--Cdc20/Fizzy
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0097027--F:ubiquitin-protein transferase activator activity
GO:0051301--P:cell division
GO:0010492--P:maintenance of shoot apical meristem identity
GO:0007067--P:mitotic nuclear division
GO:0032877--P:positive regulation of DNA endoreduplication
GO:1904668--P:positive regulation of ubiquitin protein ligase activity
GO:0016567--P:protein ubiquitination
GO:0008361--P:regulation of cell size

KEGG ath:AT4G11920
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aly-006358 Arabidopsis lyrata 96.63 0.00e+00 911.00
IUUC-Bol-015548 Brassica oleracea 84.55 0.00e+00 783.00
IUUC-Bra-018065 Brassica rapa 84.90 0.00e+00 759.00
Created Date 25-Jun-2017

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