iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

mRNA Expression
GEO	FFGED
Protein-protein Interaction
IID	iRefIndex	HINT	Mentha
Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics
GPMDB

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 adaptor/Cullin RING/APC_C/APC_C	APC_C	21107322; 16763193

Organism

Saccharomyces cerevisiae

Functional Description
(View)

The APC/C is composed of at least 13 subunits that stay tightly associated throughout the cell cycle: APC1, APC2, APC4, APC5, APC9, APC11, CDC16, CDC23, CDC26, CDC27, DOC1, MND2 and SWM1.

Protein Sequence
(Fasta)

MSSPINDYFI DYNPLFPIFA TRIAKGLAIY RVSDHARLAV IPIRNINLVA NYDWDTTTGK 60
FLSIFFKDGT IRIHDIFKDG RLVSFLRIPS TKISKGIWDR IPLRYEPNNR DFACNIIDDL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGTCTC CTATTAATGA TTATTTCATT GATTATAACC CTCTTTTTCC AATCTTTGCT 60
ACAAGAATTG CGAAAGGCCT TGCTATTTAC AGAGTCTCGG ATCACGCTAG GCTTGCAGTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0131--Cell cycle
KW-0132--Cell division
KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0903--Direct protein sequencing
KW-0498--Mitosis
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR024789--APC4
IPR024790--APC4_long_dom

Pfam

PF12896--ANAPC4

Gene Ontology

GO:0005680--C:anaphase-promoting complex
GO:0005737--C:cytoplasm
GO:0034399--C:nuclear periphery
GO:0031145--P:anaphase-promoting complex-dependent catabolic process
GO:0051301--P:cell division
GO:0007067--P:mitotic nuclear division
GO:0016567--P:protein ubiquitination
GO:0030071--P:regulation of mitotic metaphase/anaphase transition

KEGG

sce:YDR118W

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002352	Ailuropoda melanoleuca	28.36	8.80e-01	27.70
IUUC-Apl-003621	Anas platyrhynchos	33.33	1.20e-02	31.60
IUUC-Aly-006474	Arabidopsis lyrata	29.23	6.00e-03	33.90
IUUC-Ago-007938	Ashbya gossypii	21.80	7.00e-13	67.40
IUUC-Acl-008322	Aspergillus clavatus	25.22	5.00e-03	34.70
IUUC-Afl-008731	Aspergillus flavus	21.08	2.00e-03	35.80
IUUC-Afu-008986	Aspergillus fumigatus	26.06	5.00e-03	34.30
IUUC-Ani-009236	Aspergillus nidulans	24.64	7.00e-03	33.90
IUUC-Ang-009689	Aspergillus niger	27.36	1.20e-02	33.10
IUUC-Ate-010504	Aspergillus terreus	23.53	1.00e-03	36.60
IUUC-Ame-010618	Astyanax mexicanus	20.79	1.70e-01	30.00
IUUC-Bgr-012272	Blumeria graminis	22.73	8.00e-03	33.90
IUUC-Bta-013364	Bos taurus	23.91	5.50e-02	29.60
IUUC-Bol-016377	Brassica oleracea	44.23	7.00e-03	33.50
IUUC-Cel-018310	Caenorhabditis elegans	33.85	2.30e-02	33.10
IUUC-Cja-019493	Callithrix jacchus	21.48	1.30e-02	31.60
IUUC-Cfa-020438	Canis familiaris	32.69	7.50e-01	25.80
IUUC-Csa-024214	Chlorocebus sabaeus	32.69	7.20e-01	25.80
IUUC-Cho-024662	Choloepus hoffmanni	24.64	4.80e-02	29.60
IUUC-Cme-027231	Cyanidioschyzon merolae	32.69	2.60e-01	28.10
IUUC-Dor-030244	Dipodomys ordii	32.69	7.40e-01	25.80
IUUC-Dse-031568	Dothistroma septosporum	25.40	5.00e-02	31.20
IUUC-Eeu-034926	Erinaceus europaeus	27.71	2.00e-01	30.80
IUUC-Fal-036674	Ficedula albicollis	44.44	7.00e-03	32.70
IUUC-Fox-038002	Fusarium oxysporum	33.33	6.00e-03	32.70
IUUC-Fso-038390	Fusarium solani	22.60	2.00e-04	38.90
IUUC-Ggr-039797	Gaeumannomyces graminis	31.48	4.00e-03	34.70
IUUC-Hsa-046604	Homo sapiens	32.69	7.10e-01	25.80
IUUC-Hvu-047474	Hordeum vulgare	26.09	2.00e-03	33.50
IUUC-Kpa-049219	Komagataella pastoris	27.04	3.00e-08	51.60
IUUC-Lch-049802	Latimeria chalumnae	23.84	7.00e-03	33.50
IUUC-Lma-053262	Leptosphaeria maculans	22.90	9.00e-04	37.40
IUUC-Mcc-054717	Macaca mulatta	32.69	9.10e-01	25.40
IUUC-Meu-055975	Macropus eugenii	23.66	5.00e-03	33.50
IUUC-Mor-056950	Magnaporthe oryzae	28.12	2.00e-04	38.90
IUUC-Mpo-057479	Magnaporthe poae	20.57	6.00e-05	40.80
IUUC-Mtr-058074	Medicago truncatula	27.91	3.00e-03	34.30
IUUC-Mla-059050	Melampsora laricipopulina	23.77	1.00e-03	37.40
IUUC-Mga-059966	Meleagris gallopavo	31.52	2.00e-02	32.70
IUUC-Mvi-060263	Microbotryum violaceum	24.14	2.50e-02	32.70
IUUC-Mmr-060849	Microcebus murinus	32.69	8.10e-01	25.80
IUUC-Mdo-062041	Monodelphis domestica	28.40	3.00e-03	34.30
IUUC-Mmu-064362	Mus musculus	30.16	7.00e-03	32.70
IUUC-Mpu-066892	Mustela putorius furo	32.69	7.20e-01	25.80
IUUC-Nfi-068257	Neosartorya fischeri	25.12	6.00e-03	34.30
IUUC-Ncr-068721	Neurospora crassa	20.35	4.00e-03	35.00
IUUC-Nle-069770	Nomascus leucogenys	32.69	7.20e-01	25.80
IUUC-Opr-070517	Ochotona princeps	32.69	7.70e-01	25.80
IUUC-Ocu-074360	Oryctolagus cuniculus	23.91	2.10e-02	30.80
IUUC-Ogl-077098	Oryza glaberrima	29.33	1.20e-01	28.90
IUUC-Oin-079870	Oryza indica	29.33	1.10e-01	28.90
IUUC-Olo-080999	Oryza longistaminata	32.81	1.10e-01	28.90
IUUC-Oru-084526	Oryza rufipogon	29.33	1.20e-01	28.90
IUUC-Osa-086058	Oryza sativa	29.33	1.10e-01	28.90
IUUC-Ola-087045	Oryzias latipes	27.47	7.50e-02	29.60
IUUC-Ptr-090802	Pan troglodytes	24.66	6.30e-02	30.00
IUUC-Pan-092149	Papio anubis	32.69	7.20e-01	25.80
IUUC-Pma-094524	Petromyzon marinus	27.12	8.20e-01	25.40
IUUC-Pno-094772	Phaeosphaeria nodorum	25.35	8.00e-04	37.00
IUUC-Pab-098532	Pongo abelii	21.85	2.70e-02	32.00
IUUC-Pop-099739	Populus trichocarpa	25.27	4.00e-03	32.30
IUUC-Pva-103210	Pteropus vampyrus	25.66	5.00e-01	26.90
IUUC-Pte-104327	Pyrenophora teres	22.16	7.00e-05	40.80
IUUC-Pyt-104524	Pyrenophora triticirepentis	22.16	7.00e-05	40.80
IUUC-Rno-104841	Rattus norvegicus	23.03	1.40e-02	32.70
IUUC-Sja-107773	Schizosaccharomyces japonicus	26.47	1.00e-05	43.10
IUUC-Spo-108176	Schizosaccharomyces pombe	25.81	2.00e-03	36.20
IUUC-Sit-109879	Setaria italica	24.53	2.10e-02	32.30
IUUC-Ssc-116078	Sus scrofa	32.69	7.50e-01	25.80
IUUC-Tru-117822	Takifugu rubripes	27.47	8.20e-02	29.30
IUUC-Tsy-119289	Tarsius syrichta	21.85	4.00e-02	31.20
IUUC-Tae-124182	Triticum aestivum	27.54	1.00e-03	34.70
IUUC-Tbe-127933	Tupaia belangeri	26.27	2.00e-02	31.20
IUUC-Vda-130028	Verticillium dahliae	20.34	5.00e-04	37.70
IUUC-Vpa-130368	Vicugna pacos	35.71	4.40e-02	30.00
IUUC-Yli-134609	Yarrowia lipolytica	22.16	6.00e-10	57.40

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence