iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

mRNA Expression
GEO	FFGED
Protein-protein Interaction
IID	iRefIndex	HINT	Mentha
Post-translational Modifications (PTMs)
dbPAF	dbPTM	UniProt	PHOSIDA
BioGRID
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.20e-18	63.6	416	447

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDl 30
           H++ +t++af   d  ++++Gs D+t+ +WDl
   Q: 416  HKGAITSIAFnpLDeSIVAVGSEDNTVTLWDL 447
           99********9955588999***********7 PP

Organism

Saccharomyces cerevisiae

Protein Sequence
(Fasta)

MSKRSIEVNE EQDRVVSAKT ESHSVPAIPA SEEQDAPKND LEEQLSDEFD SDGEIIEIDG 60
DDEINDEDDL RKKQEEAETL VQKDQSEGNK EKIQELYLPH MSRPLGPDEV LEADPTVYEM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGAAAA GGTCTATCGA GGTCAACGAG GAACAAGATA GAGTGGTCTC TGCTAAAACA 60
GAATCTCACT CTGTTCCTGC TATTCCCGCC TCTGAAGAGC AAGATGCTCC CAAGAATGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-0597--Phosphoprotein
KW-1185--Reference proteome
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0853--WD repeat

Interpro

IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0051082--F:unfolded protein binding
GO:0042254--P:ribosome biogenesis
GO:0006364--P:rRNA processing

KEGG

sce:YMR131C

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000677	Aegilops tauschii	33.88	6.00e-57	213.00
IUUC-Aml-002309	Ailuropoda melanoleuca	35.02	1.00e-66	245.00
IUUC-Atr-002461	Amborella trichopoda	35.15	2.00e-64	238.00
IUUC-Aca-004760	Anolis carolinensis	36.12	6.00e-67	246.00
IUUC-Aly-005405	Arabidopsis lyrata	36.08	2.00e-63	234.00
IUUC-Ath-007178	Arabidopsis thaliana	36.17	3.00e-65	240.00
IUUC-Ago-007735	Ashbya gossypii	70.42	0.00e+00	732.00
IUUC-Acl-008294	Aspergillus clavatus	45.85	4.00e-108	382.00
IUUC-Afl-008486	Aspergillus flavus	46.05	1.00e-106	377.00
IUUC-Afu-009019	Aspergillus fumigatus	45.50	6.00e-108	382.00
IUUC-Ani-009465	Aspergillus nidulans	45.22	2.00e-106	377.00
IUUC-Ang-009641	Aspergillus niger	42.69	9.00e-107	378.00
IUUC-Ate-010426	Aspergillus terreus	46.30	2.00e-109	387.00
IUUC-Ame-010856	Astyanax mexicanus	37.73	2.00e-69	254.00
IUUC-Bgr-012258	Blumeria graminis	43.54	3.00e-86	310.00
IUUC-Bta-012437	Bos taurus	36.76	2.00e-66	244.00
IUUC-Bci-013647	Botrytis cinerea	45.80	1.00e-100	358.00
IUUC-Bdi-014728	Brachypodium distachyon	36.08	3.00e-66	243.00
IUUC-Bol-015126	Brassica oleracea	35.21	2.00e-62	231.00
IUUC-Bra-016700	Brassica rapa	46.02	8.00e-39	152.00
IUUC-Cel-018454	Caenorhabditis elegans	34.25	4.00e-66	243.00
IUUC-Cja-018859	Callithrix jacchus	35.53	4.00e-67	246.00
IUUC-Cfa-020912	Canis familiaris	36.78	3.00e-64	236.00
IUUC-Cpo-021368	Cavia porcellus	36.40	2.00e-66	244.00
IUUC-Cre-022850	Chlamydomonas reinhardtii	28.12	3.00e-41	160.00
IUUC-Csa-023599	Chlorocebus sabaeus	35.89	2.00e-65	240.00
IUUC-Cin-025718	Ciona intestinalis	36.77	2.00e-66	244.00
IUUC-Csv-025806	Ciona savignyi	39.81	3.00e-53	199.00
IUUC-Cgl-026766	Colletotrichum gloeosporioides	40.10	2.00e-81	294.00
IUUC-Cne-026781	Cryptococcus neoformans	40.33	3.00e-77	280.00
IUUC-Cme-027129	Cyanidioschyzon merolae	29.37	7.00e-36	142.00
IUUC-Dre-028225	Danio rerio	37.93	4.00e-71	259.00
IUUC-Dno-029792	Dasypus novemcinctus	35.37	6.00e-64	236.00
IUUC-Dor-030773	Dipodomys ordii	32.27	1.00e-21	95.10
IUUC-Dse-031289	Dothistroma septosporum	46.24	1.00e-106	377.00
IUUC-Dme-031676	Drosophila melanogaster	36.28	2.00e-68	251.00
IUUC-Eca-033618	Equus caballus	36.02	3.00e-64	236.00
IUUC-Fca-036102	Felis catus	36.08	2.00e-64	237.00
IUUC-Fox-037899	Fusarium oxysporum	49.28	4.00e-106	375.00
IUUC-Fso-038130	Fusarium solani	48.32	2.00e-104	370.00
IUUC-Gmo-038741	Gadus morhua	39.34	2.00e-72	263.00
IUUC-Ggr-040086	Gaeumannomyces graminis	45.13	7.00e-99	352.00
IUUC-Gac-042243	Gasterosteus aculeatus	37.62	1.00e-69	255.00
IUUC-Gma-044177	Glycine max	34.99	1.00e-62	231.00
IUUC-Ggo-044564	Gorilla gorilla	35.31	3.00e-66	243.00
IUUC-Hsa-046021	Homo sapiens	35.67	3.00e-66	243.00
IUUC-Hvu-047721	Hordeum vulgare	33.25	2.00e-59	221.00
IUUC-Itr-048189	Ictidomys tridecemlineatus	35.96	5.00e-66	243.00
IUUC-Kpa-049271	Komagataella pastoris	67.94	3.00e-171	592.00
IUUC-Lch-049974	Latimeria chalumnae	34.31	1.00e-62	231.00
IUUC-Lpe-051388	Leersia perrieri	34.06	4.00e-54	203.00
IUUC-Lma-053010	Leptosphaeria maculans	46.15	1.00e-105	374.00
IUUC-Laf-054058	Loxodonta africana	36.12	2.00e-67	247.00
IUUC-Mcc-055246	Macaca mulatta	35.67	2.00e-65	240.00
IUUC-Meu-056795	Macropus eugenii	34.51	2.00e-62	231.00
IUUC-Mor-057175	Magnaporthe oryzae	45.54	3.00e-98	350.00
IUUC-Mpo-057388	Magnaporthe poae	40.87	7.00e-81	292.00
IUUC-Mtr-057752	Medicago truncatula	35.70	1.00e-64	238.00
IUUC-Mla-058904	Melampsora laricipopulina	40.50	2.00e-75	274.00
IUUC-Mvi-060525	Microbotryum violaceum	37.44	2.00e-69	254.00
IUUC-Mmr-060905	Microcebus murinus	36.54	1.00e-64	238.00
IUUC-Mmu-063428	Mus musculus	35.65	1.00e-65	241.00
IUUC-Mac-065276	Musa acuminata	35.38	2.00e-63	234.00
IUUC-Mpu-066062	Mustela putorius furo	36.32	4.00e-67	246.00
IUUC-Mlu-068115	Myotis lucifugus	42.29	9.00e-44	167.00
IUUC-Nfi-068512	Neosartorya fischeri	45.37	5.00e-105	372.00
IUUC-Ncr-068629	Neurospora crassa	45.61	1.00e-96	345.00
IUUC-Nle-070016	Nomascus leucogenys	35.02	1.00e-63	234.00
IUUC-Ont-072230	Oreochromis niloticus	37.85	3.00e-70	256.00
IUUC-Oan-072759	Ornithorhynchus anatinus	29.25	3.00e-43	166.00
IUUC-Ocu-074511	Oryctolagus cuniculus	35.59	2.00e-62	231.00
IUUC-Oba-075093	Oryza barthii	31.59	1.00e-54	204.00
IUUC-Obr-076748	Oryza brachyantha	32.30	6.00e-60	222.00
IUUC-Ogl-077397	Oryza glaberrima	33.25	4.00e-62	230.00
IUUC-Ogu-078111	Oryza glumaepatula	31.46	3.00e-53	202.00
IUUC-Oin-079564	Oryza indica	31.59	2.00e-57	214.00
IUUC-Olo-080909	Oryza longistaminata	25.65	7.00e-37	146.00
IUUC-Ome-081768	Oryza meridionalis	31.37	2.00e-54	204.00
IUUC-Oni-082453	Oryza nivara	31.59	3.00e-56	211.00
IUUC-Opu-084133	Oryza punctata	30.61	1.00e-49	189.00
IUUC-Oru-085056	Oryza rufipogon	29.66	7.00e-42	162.00
IUUC-Osa-085735	Oryza sativa	32.78	4.00e-62	229.00
IUUC-Ola-087066	Oryzias latipes	38.14	2.00e-66	244.00
IUUC-Olu-087594	Ostreococcus lucimarinus	35.18	2.00e-65	240.00
IUUC-Oga-087974	Otolemur garnettii	34.87	5.00e-64	236.00
IUUC-Oar-089902	Ovis aries	36.60	1.00e-65	241.00
IUUC-Ptr-090469	Pan troglodytes	33.77	2.00e-63	234.00
IUUC-Pan-092858	Papio anubis	35.67	2.00e-65	241.00
IUUC-Psi-094092	Pelodiscus sinensis	31.15	3.00e-30	123.00
IUUC-Pno-094919	Phaeosphaeria nodorum	44.60	5.00e-98	349.00
IUUC-Ppa-095849	Physcomitrella patens	33.61	9.00e-69	252.00
IUUC-Pfo-096535	Poecilia formosa	37.26	3.00e-70	257.00
IUUC-Pab-098478	Pongo abelii	35.67	6.00e-66	242.00
IUUC-Pop-098902	Populus trichocarpa	35.20	2.00e-69	254.00
IUUC-Pca-100403	Procavia capensis	39.06	6.00e-51	191.00
IUUC-Ppe-101997	Prunus persica	35.22	6.00e-65	239.00
IUUC-Pva-102423	Pteropus vampyrus	35.98	8.00e-67	245.00
IUUC-Pgr-103339	Puccinia graminis	40.86	2.00e-85	308.00
IUUC-Ptt-103937	Puccinia triticina	39.82	1.00e-81	295.00
IUUC-Pte-104051	Pyrenophora teres	46.15	1.00e-106	377.00
IUUC-Pyt-104644	Pyrenophora triticirepentis	46.15	8.00e-107	378.00
IUUC-Rno-106118	Rattus norvegicus	37.02	8.00e-63	232.00
IUUC-Sha-106564	Sarcophilus harrisii	35.37	1.00e-50	191.00
IUUC-Sja-107969	Schizosaccharomyces japonicus	45.28	6.00e-99	352.00
IUUC-Spo-108351	Schizosaccharomyces pombe	42.20	3.00e-93	333.00
IUUC-Ssl-108452	Sclerotinia sclerotiorum	46.52	4.00e-102	362.00
IUUC-Smo-108943	Selaginella moellendorffii	35.40	4.00e-67	246.00
IUUC-Sit-110719	Setaria italica	36.10	1.00e-64	238.00
IUUC-Sly-111245	Solanum lycopersicum	32.62	2.00e-53	201.00
IUUC-Stu-112645	Solanum tuberosum	33.73	2.00e-58	218.00
IUUC-Sar-113342	Sorex araneus	36.64	6.00e-59	219.00
IUUC-Sbi-114359	Sorghum bicolor	36.10	3.00e-65	240.00
IUUC-Sre-115098	Sporisorium reilianum	37.16	6.00e-80	289.00
IUUC-Ssc-115496	Sus scrofa	35.95	1.00e-65	241.00
IUUC-Tru-117662	Takifugu rubripes	37.24	2.00e-68	251.00
IUUC-Tni-120564	Tetraodon nigroviridis	35.92	8.00e-55	205.00
IUUC-Tca-121710	Theobroma cacao	34.43	2.00e-65	241.00
IUUC-Tre-122239	Trichoderma reesei	47.96	2.00e-104	370.00
IUUC-Tvi-122589	Trichoderma virens	48.08	2.00e-104	370.00
IUUC-Tae-122903	Triticum aestivum	36.47	1.00e-67	248.00
IUUC-Tur-126135	Triticum urartu	36.28	3.00e-52	197.00
IUUC-Tme-127073	Tuber melanosporum	43.33	6.00e-95	339.00
IUUC-Ttr-128383	Tursiops truncatus	35.37	3.00e-62	230.00
IUUC-Uma-129345	Ustilago maydis	39.04	6.00e-84	302.00
IUUC-Vda-129893	Verticillium dahliae	45.06	1.00e-100	358.00
IUUC-Vvi-131067	Vitis vinifera	35.45	3.00e-65	240.00
IUUC-Xtr-132603	Xenopus tropicalis	37.79	4.00e-69	253.00
IUUC-Xma-133149	Xiphophorus maculatus	36.60	1.00e-69	255.00
IUUC-Yli-134459	Yarrowia lipolytica	49.36	8.00e-131	458.00
IUUC-Zma-135548	Zea mays	35.63	5.00e-64	236.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence