iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

mRNA Expression
GEO	FFGED
Protein-protein Interaction
IID	iRefIndex	HINT	Mentha
Post-translational Modifications (PTMs)
CPLM	dbPAF	dbPTM	UniProt
PHOSIDA	BioGRID
Protein Expression/Proteomics
GPMDB

Status

Reviewed

Details

Family	Domain	References (PMIDs)
UBD/Alpha-Helix/CUE	CUE	12628920

Classification

Family	E-value	Score	Start	End
UBD/Alpha-Helix/CUE	2.60e-10	38.6	76	115

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/CUE

   S: 3    etaleqLkeiFPnldysviqvvLeantgsleaavnnLLegs 43
            +++e +++++P+++++ + ++L  ntgs+e++++n++ g+
   Q: 76   SDMVEIVMTMAPHVPQEKVVQDL-RNTGSIEHTMENIFAGK 115
           689********************.*************9986 PP

Organism

Saccharomyces cerevisiae

Protein Sequence
(Fasta)

MDGSTIVFIL TMVCLFVYTV KHRGAKQVPS RTVQDAKPAP SVATNDPSPE PVPSAPEERV 60
ARLNRHGSDR KRAVNSDMVE IVMTMAPHVP QEKVVQDLRN TGSIEHTMEN IFAGKLD 117

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATGGAT CGACTATAGT GTTTATACTG ACGATGGTGT GCTTGTTTGT TTACACCGTG 60
AAACACAGGG GCGCCAAGCA AGTACCCTCG CGAACCGTAC AGGATGCCAA ACCGGCGCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0256--Endoplasmic reticulum
KW-1017--Isopeptide bond
KW-0597--Phosphoprotein
KW-1185--Reference proteome
KW-0832--Ubl conjugation

Interpro

IPR003892--CUE

PROSITE

PS51140--CUE

Pfam

PF02845--CUE

SMART

SM00546--CUE

Gene Ontology

GO:0000839--C:Hrd1p ubiquitin ligase ERAD-L complex
GO:0030176--C:integral component of endoplasmic reticulum membrane
GO:0043130--F:ubiquitin binding
GO:0097027--F:ubiquitin-protein transferase activator activity
GO:0030433--P:ubiquitin-dependent ERAD pathway

KEGG

sce:YML101C

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bci-013678	Botrytis cinerea	40.00	4.00e-03	32.70
IUUC-Cgl-026735	Colletotrichum gloeosporioides	41.03	2.00e-03	33.90
IUUC-Fox-037893	Fusarium oxysporum	42.50	2.00e-04	36.60
IUUC-Fso-038207	Fusarium solani	42.50	2.00e-04	37.00
IUUC-Ggr-039795	Gaeumannomyces graminis	40.00	7.00e-03	32.00
IUUC-Kpa-049306	Komagataella pastoris	35.56	2.30e-02	29.30
IUUC-Mor-057019	Magnaporthe oryzae	35.00	3.10e-02	29.60
IUUC-Mdo-062324	Monodelphis domestica	41.03	5.00e-04	35.00
IUUC-Opr-070702	Ochotona princeps	41.03	5.00e-03	33.90
IUUC-Ogu-078481	Oryza glumaepatula	37.14	5.00e-03	33.90
IUUC-Ome-081941	Oryza meridionalis	37.14	5.00e-03	33.90
IUUC-Oni-082488	Oryza nivara	37.14	6.00e-03	33.90
IUUC-Opu-083500	Oryza punctata	34.04	4.00e-03	34.70
IUUC-Pma-094264	Petromyzon marinus	35.90	3.00e-03	33.50
IUUC-Tre-122164	Trichoderma reesei	40.00	1.00e-03	34.30
IUUC-Tvi-122291	Trichoderma virens	40.00	6.00e-04	35.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence