iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMUSG00000030870.12	ENSMUST00000033158.5	ENSMUSP00000033158.4
ENSMUSG00000030870.12	ENSMUST00000153640.2	ENSMUSP00000146254.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress	GXD
DNA & RNA Element
miRTarBase	microRNA	TRANSFAC	RepTar
RAID2
Protein-protein Interaction
IID
Protein 3D Structure
PDB	MMDB
Post-translational Modifications (PTMs)
CPLM	dbPAF	PhosphositePlus	mUbiSiDa
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	7.40e-09	36.5	152	214

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 10   gs.eltlkvnpsdtVaeLKekiekklgippeqqrLiykGkiLeddktLadyglkdgstihllek 72
           ++  +++kv+ ++t +eLK+ki++ +g+pp+ q+ +ykG +  +dktL + +++ g +i+++ +
   Q: 152  NKtKHDVKVPLDSTGSELKQKIHSITGLPPAMQKVMYKGLV-PEDKTLREIKVTSGAKIMVVGS 214
           45589**********************************88.7788***************976 PP

Organism

Mus musculus

Protein Sequence
(Fasta)

MLKRGRGRPG KRRRRVSIET STCFRPACVK LGAGAGANLR QLASSRRPLR SWWVLYTIIM 60
AAAGAPDGME EPGMDTEAEA VATEAPARPL NCVEAEAAVG AAAEDSCDAR GNLQPAPAQP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCTGGGCTG CTCACGCCCC TCTGGACTAG GGCGGCGATG CGCCGCCGCT CGGGGACCGA 60
GCGCTGCGAG CAGGCGATCT CCCAGACCCG CCCCCTCCGG CTGCGGGAAT GCTAAAGCGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0002--3D-structure
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR029071--Ubiquitin-rel_dom
IPR019954--Ubiquitin_CS
IPR000626--Ubiquitin_dom

PROSITE

PS00299--UBIQUITIN_1
PS50053--UBIQUITIN_2

Pfam

PF00240--ubiquitin

SMART

SM00213--UBQ

Gene Ontology

GO:0005913--C:cell-cell adherens junction
GO:0098641--F:cadherin binding involved in cell-cell adhesion
GO:0003723--F:RNA binding

KEGG

mmu:28018

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001580	Ailuropoda melanoleuca	87.82	4.00e-165	574.00
IUUC-Aly-006310	Arabidopsis lyrata	32.14	8.00e-05	39.70
IUUC-Ame-011939	Astyanax mexicanus	72.04	7.00e-125	439.00
IUUC-Bgr-012175	Blumeria graminis	32.14	7.00e-05	41.20
IUUC-Bta-012708	Bos taurus	89.97	4.00e-142	497.00
IUUC-Bol-016423	Brassica oleracea	33.93	1.00e-05	42.00
IUUC-Cja-019584	Callithrix jacchus	95.79	2.00e-160	558.00
IUUC-Cfa-020254	Canis familiaris	92.66	3.00e-158	551.00
IUUC-Cpo-021868	Cavia porcellus	93.24	0.00e+00	635.00
IUUC-Csa-024254	Chlorocebus sabaeus	97.33	2.00e-145	508.00
IUUC-Cin-025226	Ciona intestinalis	51.79	6.00e-68	250.00
IUUC-Csv-025829	Ciona savignyi	51.77	1.00e-63	236.00
IUUC-Dre-027646	Danio rerio	84.43	5.00e-124	437.00
IUUC-Dno-029626	Dasypus novemcinctus	93.20	1.00e-168	585.00
IUUC-Dor-030813	Dipodomys ordii	87.27	3.00e-109	388.00
IUUC-Ete-032959	Echinops telfairi	84.33	8.00e-119	420.00
IUUC-Eca-033597	Equus caballus	93.85	4.00e-148	517.00
IUUC-Fal-037165	Ficedula albicollis	90.08	3.00e-119	421.00
IUUC-Gmo-039221	Gadus morhua	80.08	5.00e-119	420.00
IUUC-Gga-040520	Gallus gallus	84.86	9.00e-125	439.00
IUUC-Gac-042382	Gasterosteus aculeatus	79.54	2.00e-124	438.00
IUUC-Ggo-044964	Gorilla gorilla	86.97	1.00e-177	616.00
IUUC-Hsa-046431	Homo sapiens	96.76	4.00e-150	523.00
IUUC-Itr-048676	Ictidomys tridecemlineatus	95.03	8.00e-157	545.00
IUUC-Lch-050273	Latimeria chalumnae	86.48	3.00e-125	441.00
IUUC-Lpe-050908	Leersia perrieri	32.73	1.00e-04	39.30
IUUC-Loc-052271	Lepisosteus oculatus	85.66	3.00e-126	444.00
IUUC-Laf-054107	Loxodonta africana	92.92	4.00e-169	587.00
IUUC-Mcc-055142	Macaca mulatta	95.18	3.00e-172	597.00
IUUC-Mtr-058023	Medicago truncatula	28.00	5.00e-05	41.60
IUUC-Mga-059845	Meleagris gallopavo	88.60	7.00e-122	429.00
IUUC-Mmr-061277	Microcebus murinus	96.33	3.00e-109	387.00
IUUC-Mdo-062460	Monodelphis domestica	80.13	2.00e-119	421.00
IUUC-Mac-065192	Musa acuminata	26.79	5.00e-06	44.70
IUUC-Mlu-068170	Myotis lucifugus	93.22	3.00e-169	588.00
IUUC-Nle-069620	Nomascus leucogenys	95.18	1.00e-173	602.00
IUUC-Ont-072381	Oreochromis niloticus	83.40	8.00e-123	432.00
IUUC-Oan-073197	Ornithorhynchus anatinus	77.81	9.00e-128	449.00
IUUC-Ocu-074629	Oryctolagus cuniculus	91.22	3.00e-180	624.00
IUUC-Ogu-078699	Oryza glumaepatula	32.73	1.00e-04	39.70
IUUC-Olo-081071	Oryza longistaminata	32.76	9.00e-05	39.70
IUUC-Opu-083599	Oryza punctata	32.76	3.00e-05	41.20
IUUC-Ola-087474	Oryzias latipes	81.38	5.00e-114	403.00
IUUC-Oga-088035	Otolemur garnettii	95.47	1.00e-156	545.00
IUUC-Oar-089730	Ovis aries	96.34	6.00e-138	483.00
IUUC-Ptr-091542	Pan troglodytes	94.05	2.00e-179	622.00
IUUC-Pan-092707	Papio anubis	97.41	2.00e-150	525.00
IUUC-Pfo-096242	Poecilia formosa	78.33	3.00e-114	404.00
IUUC-Pab-098600	Pongo abelii	97.09	3.00e-154	537.00
IUUC-Rno-106094	Rattus norvegicus	96.88	5.00e-179	620.00
IUUC-Smo-109136	Selaginella moellendorffii	25.24	2.00e-03	36.20
IUUC-Ssc-116101	Sus scrofa	94.33	0.00e+00	627.00
IUUC-Tgu-117308	Taeniopygia guttata	88.84	4.00e-117	413.00
IUUC-Tru-118564	Takifugu rubripes	79.13	1.00e-97	348.00
IUUC-Tsy-118812	Tarsius syrichta	85.55	8.00e-144	503.00
IUUC-Tni-119711	Tetraodon nigroviridis	82.57	6.00e-122	429.00
IUUC-Tca-121676	Theobroma cacao	37.74	1.00e-05	43.90
IUUC-Tur-126434	Triticum urartu	32.76	2.00e-03	36.20
IUUC-Ttr-128344	Tursiops truncatus	91.50	0.00e+00	627.00
IUUC-Vpa-130787	Vicugna pacos	97.35	6.00e-123	433.00
IUUC-Vvi-130913	Vitis vinifera	25.71	5.00e-05	41.20
IUUC-Xtr-132745	Xenopus tropicalis	82.72	1.00e-115	408.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence