iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
microRNA	RAID2
Protein-protein Interaction
IID	iRefIndex	Mentha
Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.10e-06	28.2	255	285

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWD 29
           H+ ++t++++   +d+l++s++ Dg++ +W+
   Q: 255  HNMGITSVDWnkaDDRLVISSGCDGQVVIWN 285
           6778********77799*************9 PP

Organism

Caenorhabditis elegans

Protein Sequence
(Fasta)

MSSKLYSRSG VFVWSPRGIQ KKGLIVADFA QFFDPTATSI EPKIDFLPAS EIYEKSNLAP 60
NVSHATNYRF NELAWTSLCS DAHPNGIIAG GTEDGTVVFF DADKFIKNQS LEVLLSRRDH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTAAAGTTAC AACAATTGCT CATTAAACGG AACACGATCG ATGAGCTCGA AGCTCTACTC 60
ACGTTCCGGC GTATTTGTCT GGAGTCCACG TGGAATTCAG AAAAAGGTAA TTAATCAATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

cel:CELE_T01G1.3

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000990	Aegilops tauschii	23.08	2.00e-27	116.00
IUUC-Aml-001690	Ailuropoda melanoleuca	26.86	4.00e-35	142.00
IUUC-Atr-002489	Amborella trichopoda	28.72	2.00e-25	108.00
IUUC-Apl-003403	Anas platyrhynchos	23.34	4.00e-43	169.00
IUUC-Aca-005195	Anolis carolinensis	25.88	4.00e-41	162.00
IUUC-Aly-005977	Arabidopsis lyrata	22.72	1.00e-32	134.00
IUUC-Ath-006685	Arabidopsis thaliana	22.27	4.00e-29	122.00
IUUC-Ago-007906	Ashbya gossypii	26.72	1.00e-23	104.00
IUUC-Acl-008051	Aspergillus clavatus	24.34	6.00e-32	132.00
IUUC-Afl-008442	Aspergillus flavus	26.08	3.00e-31	129.00
IUUC-Afu-009123	Aspergillus fumigatus	24.55	3.00e-33	136.00
IUUC-Ani-009261	Aspergillus nidulans	24.71	3.00e-33	136.00
IUUC-Ang-009822	Aspergillus niger	24.54	2.00e-32	133.00
IUUC-Aor-010011	Aspergillus oryzae	22.97	4.00e-27	116.00
IUUC-Ate-010245	Aspergillus terreus	23.37	3.00e-31	130.00
IUUC-Ame-011240	Astyanax mexicanus	29.03	1.00e-39	157.00
IUUC-Bgr-012053	Blumeria graminis	24.95	3.00e-36	146.00
IUUC-Bta-013361	Bos taurus	30.49	2.00e-40	159.00
IUUC-Bci-013707	Botrytis cinerea	24.37	5.00e-32	132.00
IUUC-Bdi-014514	Brachypodium distachyon	23.14	3.00e-31	129.00
IUUC-Bol-015890	Brassica oleracea	21.90	3.00e-31	129.00
IUUC-Bra-017330	Brassica rapa	25.66	5.00e-29	122.00
IUUC-Cja-019085	Callithrix jacchus	31.10	3.00e-36	146.00
IUUC-Cfa-021148	Canis familiaris	30.56	4.00e-38	152.00
IUUC-Cpo-021694	Cavia porcellus	26.18	5.00e-40	159.00
IUUC-Cre-022941	Chlamydomonas reinhardtii	27.86	6.00e-26	112.00
IUUC-Csa-023347	Chlorocebus sabaeus	30.15	8.00e-36	144.00
IUUC-Cho-024699	Choloepus hoffmanni	25.57	2.00e-17	84.00
IUUC-Cin-025764	Ciona intestinalis	26.11	5.00e-37	149.00
IUUC-Csv-025902	Ciona savignyi	27.70	7.00e-39	155.00
IUUC-Cgl-026568	Colletotrichum gloeosporioides	27.04	1.00e-31	131.00
IUUC-Cne-027066	Cryptococcus neoformans	26.44	2.00e-30	127.00
IUUC-Cme-027190	Cyanidioschyzon merolae	26.28	8.00e-22	98.60
IUUC-Dre-028602	Danio rerio	27.02	4.00e-42	166.00
IUUC-Dno-029236	Dasypus novemcinctus	26.64	7.00e-40	158.00
IUUC-Dor-030540	Dipodomys ordii	27.69	1.00e-33	137.00
IUUC-Dse-031424	Dothistroma septosporum	25.00	8.00e-30	125.00
IUUC-Dme-032137	Drosophila melanogaster	26.77	1.00e-40	161.00
IUUC-Ete-032816	Echinops telfairi	24.27	4.00e-23	102.00
IUUC-Eca-034383	Equus caballus	30.49	3.00e-41	163.00
IUUC-Eeu-035236	Erinaceus europaeus	28.93	1.00e-38	154.00
IUUC-Fca-035781	Felis catus	30.49	3.00e-40	159.00
IUUC-Fal-037298	Ficedula albicollis	26.17	1.00e-40	160.00
IUUC-Fox-037759	Fusarium oxysporum	24.07	4.00e-33	136.00
IUUC-Fso-038391	Fusarium solani	25.77	1.00e-33	137.00
IUUC-Gmo-039063	Gadus morhua	26.26	1.00e-41	164.00
IUUC-Ggr-039903	Gaeumannomyces graminis	23.95	1.00e-26	114.00
IUUC-Gga-040348	Gallus gallus	26.32	7.00e-42	164.00
IUUC-Gac-042083	Gasterosteus aculeatus	27.98	2.00e-43	170.00
IUUC-Gma-043831	Glycine max	23.38	5.00e-28	119.00
IUUC-Ggo-044594	Gorilla gorilla	31.02	8.00e-38	151.00
IUUC-Hsa-046370	Homo sapiens	29.82	9.00e-35	141.00
IUUC-Hvu-047106	Hordeum vulgare	22.77	8.00e-31	127.00
IUUC-Itr-048539	Ictidomys tridecemlineatus	28.97	1.00e-40	160.00
IUUC-Kpa-049364	Komagataella pastoris	26.87	7.00e-26	112.00
IUUC-Lch-050275	Latimeria chalumnae	24.56	2.00e-27	116.00
IUUC-Lpe-051712	Leersia perrieri	20.26	3.00e-11	63.20
IUUC-Loc-052718	Lepisosteus oculatus	25.52	5.00e-39	155.00
IUUC-Lma-053135	Leptosphaeria maculans	25.60	3.00e-33	136.00
IUUC-Laf-053769	Loxodonta africana	25.54	3.00e-37	149.00
IUUC-Mcc-055035	Macaca mulatta	30.72	2.00e-36	146.00
IUUC-Meu-056623	Macropus eugenii	26.82	6.00e-29	122.00
IUUC-Mor-057177	Magnaporthe oryzae	24.88	9.00e-31	128.00
IUUC-Mpo-057504	Magnaporthe poae	23.17	2.00e-27	116.00
IUUC-Mtr-058313	Medicago truncatula	23.13	4.00e-30	125.00
IUUC-Mla-059047	Melampsora laricipopulina	24.18	8.00e-30	125.00
IUUC-Mga-060086	Meleagris gallopavo	23.65	4.00e-45	176.00
IUUC-Mvi-060241	Microbotryum violaceum	28.13	8.00e-28	118.00
IUUC-Mmr-060670	Microcebus murinus	29.28	1.00e-25	110.00
IUUC-Mdo-061894	Monodelphis domestica	26.00	1.00e-42	167.00
IUUC-Mmu-064098	Mus musculus	28.26	1.00e-44	174.00
IUUC-Mac-065074	Musa acuminata	20.37	6.00e-23	102.00
IUUC-Mpu-066837	Mustela putorius furo	29.70	2.00e-35	143.00
IUUC-Mlu-067865	Myotis lucifugus	29.83	6.00e-41	161.00
IUUC-Nfi-068529	Neosartorya fischeri	24.50	2.00e-33	137.00
IUUC-Ncr-068959	Neurospora crassa	26.25	3.00e-34	139.00
IUUC-Nle-070089	Nomascus leucogenys	29.51	2.00e-39	156.00
IUUC-Opr-070212	Ochotona princeps	29.58	1.00e-38	154.00
IUUC-Ont-072167	Oreochromis niloticus	29.69	2.00e-42	167.00
IUUC-Oan-073744	Ornithorhynchus anatinus	27.62	4.00e-39	155.00
IUUC-Ocu-073839	Oryctolagus cuniculus	29.40	6.00e-39	155.00
IUUC-Oba-075929	Oryza barthii	23.33	4.00e-31	129.00
IUUC-Obr-076078	Oryza brachyantha	26.61	3.00e-24	106.00
IUUC-Ogl-077519	Oryza glaberrima	23.16	7.00e-30	125.00
IUUC-Ogu-077980	Oryza glumaepatula	23.63	1.00e-31	131.00
IUUC-Oin-079946	Oryza indica	23.63	1.00e-31	130.00
IUUC-Olo-080277	Oryza longistaminata	21.46	3.00e-10	59.70
IUUC-Ome-081551	Oryza meridionalis	22.77	9.00e-27	114.00
IUUC-Oni-082399	Oryza nivara	23.63	1.00e-31	130.00
IUUC-Opu-083645	Oryza punctata	22.62	5.00e-26	112.00
IUUC-Oru-084591	Oryza rufipogon	22.92	4.00e-27	115.00
IUUC-Osa-085698	Oryza sativa	23.45	3.00e-30	126.00
IUUC-Ola-087264	Oryzias latipes	27.04	4.00e-46	179.00
IUUC-Olu-087684	Ostreococcus lucimarinus	28.44	2.00e-30	126.00
IUUC-Oga-088552	Otolemur garnettii	31.33	1.00e-37	150.00
IUUC-Oar-090193	Ovis aries	30.73	2.00e-41	164.00
IUUC-Ptr-091599	Pan troglodytes	25.69	4.00e-38	152.00
IUUC-Pan-092057	Papio anubis	26.46	6.00e-36	145.00
IUUC-Pma-094185	Petromyzon marinus	25.79	6.00e-35	141.00
IUUC-Pno-095056	Phaeosphaeria nodorum	24.70	9.00e-24	105.00
IUUC-Ppa-095535	Physcomitrella patens	28.25	8.00e-32	131.00
IUUC-Pfo-097123	Poecilia formosa	26.49	9.00e-44	171.00
IUUC-Pab-098721	Pongo abelii	29.34	7.00e-37	148.00
IUUC-Pop-099456	Populus trichocarpa	22.28	2.00e-23	103.00
IUUC-Pca-100606	Procavia capensis	28.85	1.00e-41	164.00
IUUC-Ppe-101423	Prunus persica	25.91	1.00e-28	120.00
IUUC-Pva-102315	Pteropus vampyrus	28.77	6.00e-42	165.00
IUUC-Pgr-103294	Puccinia graminis	23.55	4.00e-25	109.00
IUUC-Ptt-103927	Puccinia triticina	23.32	1.00e-18	88.20
IUUC-Pte-104145	Pyrenophora teres	24.64	2.00e-29	123.00
IUUC-Pyt-104813	Pyrenophora triticirepentis	24.64	3.00e-29	123.00
IUUC-Rno-105108	Rattus norvegicus	31.31	8.00e-41	161.00
IUUC-Sce-106253	Saccharomyces cerevisiae	28.16	8.00e-29	121.00
IUUC-Sha-106950	Sarcophilus harrisii	26.27	2.00e-41	163.00
IUUC-Sja-107881	Schizosaccharomyces japonicus	24.90	2.00e-31	130.00
IUUC-Spo-108124	Schizosaccharomyces pombe	23.47	2.00e-25	110.00
IUUC-Ssl-108487	Sclerotinia sclerotiorum	25.77	1.00e-34	141.00
IUUC-Smo-108717	Selaginella moellendorffii	27.03	2.00e-26	113.00
IUUC-Sit-110339	Setaria italica	21.26	2.00e-25	110.00
IUUC-Sly-111112	Solanum lycopersicum	22.25	1.00e-26	114.00
IUUC-Sar-112974	Sorex araneus	27.19	3.00e-34	139.00
IUUC-Sbi-114012	Sorghum bicolor	22.49	2.00e-30	126.00
IUUC-Sre-114994	Sporisorium reilianum	25.80	6.00e-26	112.00
IUUC-Ssc-116348	Sus scrofa	30.24	3.00e-40	159.00
IUUC-Tgu-116721	Taeniopygia guttata	23.15	9.00e-46	177.00
IUUC-Tru-118400	Takifugu rubripes	26.15	2.00e-41	163.00
IUUC-Tsy-119317	Tarsius syrichta	22.50	2.00e-28	120.00
IUUC-Tni-120382	Tetraodon nigroviridis	28.31	2.00e-40	160.00
IUUC-Tca-121760	Theobroma cacao	26.79	3.00e-31	129.00
IUUC-Tre-122238	Trichoderma reesei	23.83	1.00e-31	130.00
IUUC-Tvi-122298	Trichoderma virens	24.85	8.00e-34	138.00
IUUC-Tae-125709	Triticum aestivum	23.31	3.00e-30	126.00
IUUC-Tur-126767	Triticum urartu	23.17	3.00e-27	116.00
IUUC-Tme-127067	Tuber melanosporum	26.11	3.00e-32	132.00
IUUC-Tbe-127257	Tupaia belangeri	28.61	5.00e-30	125.00
IUUC-Ttr-129290	Tursiops truncatus	28.96	1.00e-35	144.00
IUUC-Uma-129418	Ustilago maydis	25.49	4.00e-27	116.00
IUUC-Vda-129667	Verticillium dahliae	27.46	2.00e-13	67.80
IUUC-Vpa-130428	Vicugna pacos	25.00	4.00e-39	155.00
IUUC-Vvi-131047	Vitis vinifera	26.94	5.00e-32	132.00
IUUC-Xtr-131857	Xenopus tropicalis	26.99	1.00e-35	144.00
IUUC-Xma-133350	Xiphophorus maculatus	27.98	8.00e-42	164.00
IUUC-Yli-134526	Yarrowia lipolytica	27.41	1.00e-31	131.00
IUUC-Zma-135604	Zea mays	23.09	1.00e-30	127.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence