iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000018243.7	ENSRNOT00000025072.7	ENSRNOP00000025072.6
ENSRNOG00000018243.7	ENSRNOT00000077457.1	ENSRNOP00000075601.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
microRNA	TRANSFAC	miRNAMap	RAID2
Protein-protein Interaction
IID
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	4.40e-09	36.5	152	214

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 10   gs.eltlkvnpsdtVaeLKekiekklgippeqqrLiykGkiLeddktLadyglkdgstihllek 72
           ++  +++kv+ ++t +eLK+ki++ +g+pp+ q+ +ykG +  +dktL + +++ g +i+++ +
   Q: 152  NKtKHDVKVPLDSTGSELKQKIHSITGLPPAMQKVMYKGLV-PEDKTLREIKVTSGAKIMVVGS 214
           45589**********************************88.7788***************976 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MLKRGRGRPG KRRRRVSIET STCFRPACVK LGAVAGANLS QLASSRRPLR ARWVVYTIIM 60
AAAGAPDGME EPSMDTEAEA VATEAPARPL NCVEAEAVVG TAAEDSCDAR GNLQPAPAQP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGGGGAAAA CCTCATTCCA CCCAATCAAC TTTCGCCACA GCGAGCGCGA CCCCGCCACT 60
TAAAGGCGTA GGACCCCTAT TTGGGTTGCT CACGCCCCTC TGGACAAGGG CGGCAATGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR029071--Ubiquitin-rel_dom
IPR019954--Ubiquitin_CS
IPR000626--Ubiquitin_dom

PROSITE

PS00299--UBIQUITIN_1
PS50053--UBIQUITIN_2

Pfam

PF00240--ubiquitin

SMART

SM00213--UBQ

Gene Ontology

GO:0003723--F:RNA binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000450	Aegilops tauschii	37.50	1.00e-03	36.60
IUUC-Aml-001580	Ailuropoda melanoleuca	87.82	6.00e-164	570.00
IUUC-Ame-011939	Astyanax mexicanus	71.05	4.00e-125	440.00
IUUC-Bgr-012175	Blumeria graminis	32.14	9.00e-05	41.20
IUUC-Bta-012708	Bos taurus	89.32	2.00e-143	501.00
IUUC-Bol-016423	Brassica oleracea	34.55	5.00e-05	40.40
IUUC-Cja-019584	Callithrix jacchus	94.82	2.00e-161	561.00
IUUC-Cfa-020254	Canis familiaris	91.53	8.00e-160	556.00
IUUC-Cpo-021868	Cavia porcellus	92.96	0.00e+00	643.00
IUUC-Csa-024254	Chlorocebus sabaeus	96.67	6.00e-147	513.00
IUUC-Cin-025226	Ciona intestinalis	51.39	7.00e-68	250.00
IUUC-Csv-025829	Ciona savignyi	51.77	2.00e-64	238.00
IUUC-Dre-027646	Danio rerio	83.61	4.00e-124	437.00
IUUC-Dno-029626	Dasypus novemcinctus	92.92	6.00e-170	589.00
IUUC-Dor-030813	Dipodomys ordii	86.82	3.00e-109	389.00
IUUC-Ete-032959	Echinops telfairi	83.00	5.00e-120	424.00
IUUC-Eca-033597	Equus caballus	93.53	4.00e-153	533.00
IUUC-Fal-037165	Ficedula albicollis	90.08	5.00e-121	427.00
IUUC-Gmo-039221	Gadus morhua	69.62	4.00e-120	424.00
IUUC-Gga-040520	Gallus gallus	85.26	4.00e-126	443.00
IUUC-Gac-042382	Gasterosteus aculeatus	72.19	2.00e-125	441.00
IUUC-Ggo-044964	Gorilla gorilla	87.25	4.00e-179	620.00
IUUC-Hsa-046431	Homo sapiens	96.12	2.00e-151	528.00
IUUC-Itr-048676	Ictidomys tridecemlineatus	94.37	5.00e-158	549.00
IUUC-Lch-050273	Latimeria chalumnae	86.07	9.00e-126	442.00
IUUC-Lpe-050908	Leersia perrieri	32.76	6.00e-05	40.00
IUUC-Loc-052271	Lepisosteus oculatus	84.84	2.00e-126	444.00
IUUC-Laf-054107	Loxodonta africana	92.35	5.00e-172	597.00
IUUC-Mcc-055142	Macaca mulatta	94.90	6.00e-175	606.00
IUUC-Mtr-058023	Medicago truncatula	25.24	1.00e-04	40.00
IUUC-Mga-059845	Meleagris gallopavo	86.44	2.00e-123	434.00
IUUC-Mmr-061277	Microcebus murinus	95.51	3.00e-110	390.00
IUUC-Mdo-062460	Monodelphis domestica	79.80	1.00e-121	429.00
IUUC-Mmu-064326	Mus musculus	96.88	6.00e-180	622.00
IUUC-Mac-065192	Musa acuminata	26.79	3.00e-06	45.40
IUUC-Mlu-068170	Myotis lucifugus	91.24	5.00e-170	590.00
IUUC-Nle-069620	Nomascus leucogenys	94.90	5.00e-176	610.00
IUUC-Ont-072381	Oreochromis niloticus	71.10	1.00e-123	435.00
IUUC-Oan-073197	Ornithorhynchus anatinus	78.14	1.00e-130	458.00
IUUC-Ocu-074629	Oryctolagus cuniculus	90.65	0.00e+00	630.00
IUUC-Oba-075952	Oryza barthii	32.76	4.00e-05	40.80
IUUC-Ogl-077451	Oryza glaberrima	32.76	4.00e-05	40.80
IUUC-Ogu-078699	Oryza glumaepatula	32.76	5.00e-05	40.40
IUUC-Oin-079806	Oryza indica	32.76	4.00e-05	40.40
IUUC-Olo-081071	Oryza longistaminata	32.76	5.00e-05	40.40
IUUC-Ome-081147	Oryza meridionalis	32.76	5.00e-05	40.40
IUUC-Oni-082567	Oryza nivara	32.76	5.00e-05	40.40
IUUC-Opu-083599	Oryza punctata	32.76	4.00e-05	40.80
IUUC-Oru-084855	Oryza rufipogon	32.76	5.00e-05	40.40
IUUC-Osa-086281	Oryza sativa	32.76	5.00e-05	40.40
IUUC-Ola-087474	Oryzias latipes	80.97	6.00e-115	406.00
IUUC-Oga-088035	Otolemur garnettii	94.82	7.00e-158	549.00
IUUC-Oar-089730	Ovis aries	95.60	4.00e-139	487.00
IUUC-Ptr-091542	Pan troglodytes	93.77	0.00e+00	629.00
IUUC-Pan-092707	Papio anubis	96.76	3.00e-152	530.00
IUUC-Pfo-096242	Poecilia formosa	77.95	3.00e-115	407.00
IUUC-Pab-098600	Pongo abelii	96.44	2.00e-155	541.00
IUUC-Smo-109136	Selaginella moellendorffii	25.00	2.00e-04	39.30
IUUC-Ssc-116101	Sus scrofa	94.05	0.00e+00	636.00
IUUC-Tgu-117308	Taeniopygia guttata	88.84	8.00e-119	419.00
IUUC-Tru-118564	Takifugu rubripes	79.13	5.00e-98	349.00
IUUC-Tsy-118812	Tarsius syrichta	85.27	5.00e-147	514.00
IUUC-Tni-119711	Tetraodon nigroviridis	82.16	3.00e-122	430.00
IUUC-Tca-121676	Theobroma cacao	32.86	9.00e-06	44.30
IUUC-Tur-126434	Triticum urartu	34.48	8.00e-04	37.40
IUUC-Ttr-128344	Tursiops truncatus	91.78	0.00e+00	639.00
IUUC-Vpa-130787	Vicugna pacos	95.83	1.00e-123	435.00
IUUC-Vvi-130913	Vitis vinifera	25.71	3.00e-05	41.60
IUUC-Xtr-132745	Xenopus tropicalis	82.30	1.00e-116	412.00
IUUC-Xma-133437	Xiphophorus maculatus	83.82	6.00e-124	436.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence